RNA–Protein interactions for RNA: ENST00000531480.2

CPSF1-206, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 789 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-206ENST00000531480 CYP4Z2PQ8N1L4 340 aa13.33□□□□□ -0.28
CPSF1-206ENST00000531480 MIPOL1Q8TD10 442 aa13.33□□□□□ -0.28
CPSF1-206ENST00000531480 PAQR8Q8TEZ7 354 aa13.33□□□□□ -0.28
CPSF1-206ENST00000531480 TSPEARQ8WU66 669 aa13.33□□□□□ -0.28
CPSF1-206ENST00000531480 SLC35A4Q96G79 324 aa13.33□□□□□ -0.28
CPSF1-206ENST00000531480 SECISBP2Q96T21 854 aaKnown RBP13.33□□□□□ -0.28
CPSF1-206ENST00000531480 MFRPQ9BY79 579 aa13.33□□□□□ -0.28
CPSF1-206ENST00000531480 ZCCHC3Q9NUD5 404 aaKnown RBP13.33□□□□□ -0.28
CPSF1-206ENST00000531480 HPF1Q9NWY4 346 aa13.33□□□□□ -0.28
CPSF1-206ENST00000531480 CHCHD2Q9Y6H1 151 aaPredicted RBP13.33□□□□□ -0.28
CPSF1-206ENST00000531480 B8ZZF3 427 aa13.32□□□□□ -0.28
CPSF1-206ENST00000531480 SLC28A2O43868 658 aa13.32□□□□□ -0.28
CPSF1-206ENST00000531480 TSPAN2O60636 221 aa13.32□□□□□ -0.28
CPSF1-206ENST00000531480 HNRNPCL1O60812 293 aaKnown RBP13.32□□□□□ -0.28
CPSF1-206ENST00000531480 PPM1BO75688 479 aa13.32□□□□□ -0.28
CPSF1-206ENST00000531480 HMGN2P05204 90 aaKnown RBP13.32□□□□□ -0.28
CPSF1-206ENST00000531480 SP1P08047 785 aa13.32□□□□□ -0.28
CPSF1-206ENST00000531480 ABCB1P08183 1280 aaPredicted RBP13.32□□□□□ -0.28
CPSF1-206ENST00000531480 UQCRC2P22695 453 aa13.32□□□□□ -0.28
CPSF1-206ENST00000531480 TMED10P49755 219 aaKnown RBP13.32□□□□□ -0.28
CPSF1-206ENST00000531480 ST13P50502 369 aaKnown RBP13.32□□□□□ -0.28
CPSF1-206ENST00000531480 OC90Q02509 493 aaPredicted RBP13.32□□□□□ -0.28
CPSF1-206ENST00000531480 GAB1Q13480 694 aa13.32□□□□□ -0.28
CPSF1-206ENST00000531480 ZSCAN26Q16670 478 aa13.32□□□□□ -0.28
CPSF1-206ENST00000531480 ZNF766Q5HY98 468 aa13.32□□□□□ -0.28
CPSF1-206ENST00000531480 AP1ARQ63HQ0 302 aa13.32□□□□□ -0.28
CPSF1-206ENST00000531480 SLC25A25Q6KCM7 469 aa13.32□□□□□ -0.28
CPSF1-206ENST00000531480 BHLHB9Q6PI77 547 aa13.32□□□□□ -0.28
CPSF1-206ENST00000531480 IL20RBQ6UXL0 311 aa13.32□□□□□ -0.28
CPSF1-206ENST00000531480 RTL4Q6ZR62 310 aa13.32□□□□□ -0.28
CPSF1-206ENST00000531480 CCDC121Q6ZUS5 278 aa13.32□□□□□ -0.28
CPSF1-206ENST00000531480 MDGA2Q7Z553 956 aa13.32□□□□□ -0.28
CPSF1-206ENST00000531480 ANKRD46Q86W74 232 aa13.32□□□□□ -0.28
CPSF1-206ENST00000531480 SLC34A3Q8N130 599 aa13.32□□□□□ -0.28
CPSF1-206ENST00000531480 PSD4Q8NDX1 1056 aa13.32□□□□□ -0.28
CPSF1-206ENST00000531480 OR4A15Q8NGL6 344 aa13.32□□□□□ -0.28
CPSF1-206ENST00000531480 FAM110BQ8TC76 370 aa13.32□□□□□ -0.28
CPSF1-206ENST00000531480 GTF2H4Q92759 462 aa13.32□□□□□ -0.28
CPSF1-206ENST00000531480 STACQ99469 402 aa13.32□□□□□ -0.28
CPSF1-206ENST00000531480 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.32□□□□□ -0.28
CPSF1-206ENST00000531480 SAR1AQ9NR31 198 aa13.32□□□□□ -0.28
CPSF1-206ENST00000531480 DUSP22Q9NRW4 184 aa13.32□□□□□ -0.28
CPSF1-206ENST00000531480 CCDC167Q9P0B6 97 aa13.32□□□□□ -0.28
CPSF1-206ENST00000531480 PCDHGB4Q9UN71 923 aa13.32□□□□□ -0.28
CPSF1-206ENST00000531480 GMEB1Q9Y692 573 aa13.32□□□□□ -0.28
CPSF1-206ENST00000531480 SHANK1Q9Y566 2161 aa13.31□□□□□ -0.28
CPSF1-206ENST00000531480 ANKRD33BA6NCL7 494 aa13.31□□□□□ -0.28
CPSF1-206ENST00000531480 OR6C70A6NIJ9 312 aa13.31□□□□□ -0.28
CPSF1-206ENST00000531480 CAPN14A8MX76 684 aa13.31□□□□□ -0.28
CPSF1-206ENST00000531480 SLC22A2O15244 555 aa13.31□□□□□ -0.28
CPSF1-206ENST00000531480 CFLARO15519 480 aa13.31□□□□□ -0.28
CPSF1-206ENST00000531480 ABCB7O75027 752 aa13.31□□□□□ -0.28
CPSF1-206ENST00000531480 ACP2P11117 423 aa13.31□□□□□ -0.28
CPSF1-206ENST00000531480 CD46P15529 392 aa13.31□□□□□ -0.28
CPSF1-206ENST00000531480 CD1EP15812 388 aa13.31□□□□□ -0.28
CPSF1-206ENST00000531480 NCF2P19878 526 aaPredicted RBP13.31□□□□□ -0.28
CPSF1-206ENST00000531480 CAPN3P20807 821 aa13.31□□□□□ -0.28
CPSF1-206ENST00000531480 PIGAP37287 484 aa13.31□□□□□ -0.28
CPSF1-206ENST00000531480 CDKN2CP42773 168 aa13.31□□□□□ -0.28
CPSF1-206ENST00000531480 TRPC1P48995 793 aa13.31□□□□□ -0.28
CPSF1-206ENST00000531480 PRIM2P49643 509 aa13.31□□□□□ -0.28
CPSF1-206ENST00000531480 PNLIPRP2P54317 469 aa13.31□□□□□ -0.28
CPSF1-206ENST00000531480 ZNF155Q12901 538 aaPredicted RBP13.31□□□□□ -0.28
CPSF1-206ENST00000531480 ZNHIT3Q15649 155 aaPredicted RBP13.31□□□□□ -0.28
CPSF1-206ENST00000531480 MAPKAPK3Q16644 382 aa13.31□□□□□ -0.28
CPSF1-206ENST00000531480 VPS26BQ4G0F5 336 aa13.31□□□□□ -0.28
CPSF1-206ENST00000531480 TIGD2Q4W5G0 525 aa13.31□□□□□ -0.28
CPSF1-206ENST00000531480 LRIF1Q5T3J3 769 aa13.31□□□□□ -0.28
CPSF1-206ENST00000531480 SAXO2Q658L1 398 aa13.31□□□□□ -0.28
CPSF1-206ENST00000531480 CDC73Q6P1J9 531 aa13.31□□□□□ -0.28
CPSF1-206ENST00000531480 TRPM8Q7Z2W7 1104 aa13.31□□□□□ -0.28
CPSF1-206ENST00000531480 SLC44A2Q8IWA5 706 aaPredicted RBP13.31□□□□□ -0.28
CPSF1-206ENST00000531480 TMEM178AQ8NBL3 297 aa13.31□□□□□ -0.28
CPSF1-206ENST00000531480 SLC16A11Q8NCK7 471 aa13.31□□□□□ -0.28
CPSF1-206ENST00000531480 HGDQ93099 445 aa13.31□□□□□ -0.28
CPSF1-206ENST00000531480 VPS33AQ96AX1 596 aa13.31□□□□□ -0.28
CPSF1-206ENST00000531480 OMA1Q96E52 524 aa13.31□□□□□ -0.28
CPSF1-206ENST00000531480 SPDL1Q96EA4 605 aa13.31□□□□□ -0.28
CPSF1-206ENST00000531480 NEURL3Q96EH8 262 aa13.31□□□□□ -0.28
CPSF1-206ENST00000531480 C16orf58Q96GQ5 468 aa13.31□□□□□ -0.28
CPSF1-206ENST00000531480 MAGED4Q96JG8 741 aa13.31□□□□□ -0.28
CPSF1-206ENST00000531480 PANX1Q96RD7 426 aa13.31□□□□□ -0.28
CPSF1-206ENST00000531480 INPP5KQ9BT40 448 aa13.31□□□□□ -0.28
CPSF1-206ENST00000531480 ACTRT3Q9BYD9 372 aa13.31□□□□□ -0.28
CPSF1-206ENST00000531480 HES7Q9BYE0 225 aa13.31□□□□□ -0.28
CPSF1-206ENST00000531480 SERHL2Q9H4I8 314 aa13.31□□□□□ -0.28
CPSF1-206ENST00000531480 RMND5AQ9H871 391 aa13.31□□□□□ -0.28
CPSF1-206ENST00000531480 PROK2Q9HC23 129 aa13.31□□□□□ -0.28
CPSF1-206ENST00000531480 TIMMDC1Q9NPL8 285 aa13.31□□□□□ -0.28
CPSF1-206ENST00000531480 KLF13Q9Y2Y9 288 aaPredicted RBP13.31□□□□□ -0.28
CPSF1-206ENST00000531480 SNX8Q9Y5X2 465 aa13.31□□□□□ -0.28
CPSF1-206ENST00000531480 HELZ2Q9BYK8 2649 aaKnown RBP13.31□□□□□ -0.28
CPSF1-206ENST00000531480 RNF103-CHMP3A0A140T963 221 aa13.3□□□□□ -0.28
CPSF1-206ENST00000531480 A0A1W2PP18 115 aa13.3□□□□□ -0.28
CPSF1-206ENST00000531480 CCDC154A6NI56 674 aa13.3□□□□□ -0.28
CPSF1-206ENST00000531480 CCT8L1PA6NM43 557 aa13.3□□□□□ -0.28
CPSF1-206ENST00000531480 J3QKU1 62 aa13.3□□□□□ -0.28
CPSF1-206ENST00000531480 KRT16P08779 473 aa13.3□□□□□ -0.28
CPSF1-206ENST00000531480 MAGEA8P43361 318 aa13.3□□□□□ -0.28
CPSF1-206ENST00000531480 KCNK10P57789 538 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms