RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 IRF3Q14653 427 aa10.89□□□□□ -0.67
USP35-207ENST00000530546 FAM214AQ32MH5 1076 aa10.89□□□□□ -0.67
USP35-207ENST00000530546 FAHD1Q6P587 224 aa10.89□□□□□ -0.67
USP35-207ENST00000530546 DGLUCYQ7Z3D6 616 aa10.89□□□□□ -0.67
USP35-207ENST00000530546 CCDC71Q8IV32 467 aaPredicted RBP10.89□□□□□ -0.67
USP35-207ENST00000530546 LGI4Q8N135 537 aa10.89□□□□□ -0.67
USP35-207ENST00000530546 GIMAP1Q8WWP7 306 aa10.89□□□□□ -0.67
USP35-207ENST00000530546 CRELD1Q96HD1 420 aa10.89□□□□□ -0.67
USP35-207ENST00000530546 TMEM19Q96HH6 336 aa10.89□□□□□ -0.67
USP35-207ENST00000530546 COL21A1Q96P44 957 aa10.89□□□□□ -0.67
USP35-207ENST00000530546 FCRL4Q96PJ5 515 aa10.89□□□□□ -0.67
USP35-207ENST00000530546 OR2M4Q96R27 311 aa10.89□□□□□ -0.67
USP35-207ENST00000530546 TM9SF2Q99805 663 aa10.89□□□□□ -0.67
USP35-207ENST00000530546 YIPF4Q9BSR8 244 aa10.89□□□□□ -0.67
USP35-207ENST00000530546 BEX2Q9BXY8 128 aa10.89□□□□□ -0.67
USP35-207ENST00000530546 SRRQ9GZT4 340 aa10.89□□□□□ -0.67
USP35-207ENST00000530546 CKAP5Q14008 2032 aa10.89□□□□□ -0.67
USP35-207ENST00000530546 HEATR5BQ9P2D3 2071 aa10.89□□□□□ -0.67
USP35-207ENST00000530546 BRWD1Q9NSI6 2320 aa10.89□□□□□ -0.67
USP35-207ENST00000530546 A0A1W2PQ09 198 aa10.89□□□□□ -0.67
USP35-207ENST00000530546 E9PQ18 207 aa10.89□□□□□ -0.67
USP35-207ENST00000530546 ADAMDEC1O15204 470 aa10.89□□□□□ -0.67
USP35-207ENST00000530546 PCDHGA12O60330 932 aa10.89□□□□□ -0.67
USP35-207ENST00000530546 CCNYL3P0C7X3 344 aa10.89□□□□□ -0.67
USP35-207ENST00000530546 GLULP15104 373 aa10.89□□□□□ -0.67
USP35-207ENST00000530546 ATF4P18848 351 aaPredicted RBP10.89□□□□□ -0.67
USP35-207ENST00000530546 CFL1P23528 166 aaKnown RBP10.89□□□□□ -0.67
USP35-207ENST00000530546 TEAD1P28347 426 aa10.89□□□□□ -0.67
USP35-207ENST00000530546 PEBP1P30086 187 aaKnown RBP10.89□□□□□ -0.67
USP35-207ENST00000530546 MFSD13AQ14CX5 517 aa10.89□□□□□ -0.67
USP35-207ENST00000530546 ANGPT1Q15389 498 aa10.89□□□□□ -0.67
USP35-207ENST00000530546 SLC35F1Q5T1Q4 408 aa10.89□□□□□ -0.67
USP35-207ENST00000530546 ZBTB37Q5TC79 503 aa10.89□□□□□ -0.67
USP35-207ENST00000530546 TMPRSS11AQ6ZMR5 421 aa10.89□□□□□ -0.67
USP35-207ENST00000530546 OR2L3Q8NG85 312 aa10.89□□□□□ -0.67
USP35-207ENST00000530546 OR5D16Q8NGK9 328 aa10.89□□□□□ -0.67
USP35-207ENST00000530546 UBASH3BQ8TF42 649 aa10.89□□□□□ -0.67
USP35-207ENST00000530546 SLC38A5Q8WUX1 472 aa10.89□□□□□ -0.67
USP35-207ENST00000530546 LCN9Q8WX39 176 aa10.89□□□□□ -0.67
USP35-207ENST00000530546 DNASE1L2Q92874 299 aa10.89□□□□□ -0.67
USP35-207ENST00000530546 GABRG3Q99928 467 aa10.89□□□□□ -0.67
USP35-207ENST00000530546 KCNS3Q9BQ31 491 aa10.89□□□□□ -0.67
USP35-207ENST00000530546 RNF167Q9H6Y7 350 aa10.89□□□□□ -0.67
USP35-207ENST00000530546 SYNPO2LQ9H987 977 aa10.89□□□□□ -0.67
USP35-207ENST00000530546 SIRT3Q9NTG7 399 aaPredicted RBP10.89□□□□□ -0.67
USP35-207ENST00000530546 MUTYHQ9UIF7 546 aa10.89□□□□□ -0.67
USP35-207ENST00000530546 NCKAP1Q9Y2A7 1128 aa10.89□□□□□ -0.67
USP35-207ENST00000530546 PIAS3Q9Y6X2 628 aa10.89□□□□□ -0.67
USP35-207ENST00000530546 PCDH17O14917 1159 aa10.88□□□□□ -0.67
USP35-207ENST00000530546 CLEC3AO75596 197 aa10.88□□□□□ -0.67
USP35-207ENST00000530546 IFNA14P01570 189 aa10.88□□□□□ -0.67
USP35-207ENST00000530546 CCT3P49368 545 aaKnown RBP10.88□□□□□ -0.67
USP35-207ENST00000530546 RIPPLY1Q0D2K3 151 aa10.88□□□□□ -0.67
USP35-207ENST00000530546 BAMBIQ13145 260 aa10.88□□□□□ -0.67
USP35-207ENST00000530546 QPRTQ15274 297 aa10.88□□□□□ -0.67
USP35-207ENST00000530546 BAK1Q16611 211 aa10.88□□□□□ -0.67
USP35-207ENST00000530546 SAXO2Q658L1 398 aa10.88□□□□□ -0.67
USP35-207ENST00000530546 REEP3Q6NUK4 255 aa10.88□□□□□ -0.67
USP35-207ENST00000530546 C19orf48Q6RUI8 117 aa10.88□□□□□ -0.67
USP35-207ENST00000530546 ENTHD1Q8IYW4 607 aa10.88□□□□□ -0.67
USP35-207ENST00000530546 FAM181AQ8N9Y4 354 aa10.88□□□□□ -0.67
USP35-207ENST00000530546 OR4M2Q8NGB6 313 aa10.88□□□□□ -0.67
USP35-207ENST00000530546 VANGL1Q8TAA9 524 aaPredicted RBP10.88□□□□□ -0.67
USP35-207ENST00000530546 XAGE5Q8WWM1 108 aa10.88□□□□□ -0.67
USP35-207ENST00000530546 GTPBP3Q969Y2 492 aaKnown RBP10.88□□□□□ -0.67
USP35-207ENST00000530546 NEURL3Q96EH8 262 aa10.88□□□□□ -0.67
USP35-207ENST00000530546 ZBED6CLQ96FA7 236 aaPredicted RBP10.88□□□□□ -0.67
USP35-207ENST00000530546 BBS4Q96RK4 519 aa10.88□□□□□ -0.67
USP35-207ENST00000530546 NIPSNAP1Q9BPW8 284 aa10.88□□□□□ -0.67
USP35-207ENST00000530546 NT5DC2Q9H857 520 aa10.88□□□□□ -0.67
USP35-207ENST00000530546 AMBNQ9NP70 447 aa10.88□□□□□ -0.67
USP35-207ENST00000530546 DNAH14Q0VDD8 3507 aa10.88□□□□□ -0.67
USP35-207ENST00000530546 A0A1W2PS29 197 aa10.88□□□□□ -0.67
USP35-207ENST00000530546 EFCAB10A6NFE3 127 aa10.88□□□□□ -0.67
USP35-207ENST00000530546 CLCA1A8K7I4 914 aa10.88□□□□□ -0.67
USP35-207ENST00000530546 ATP6V1G2-DDX39BF2Z307 99 aa10.88□□□□□ -0.67
USP35-207ENST00000530546 PGRMC2O15173 223 aa10.88□□□□□ -0.67
USP35-207ENST00000530546 NARSO43776 548 aaKnown RBP10.88□□□□□ -0.67
USP35-207ENST00000530546 SLC28A2O43868 658 aa10.88□□□□□ -0.67
USP35-207ENST00000530546 RASGRP1O95267 797 aa10.88□□□□□ -0.67
USP35-207ENST00000530546 OR12D1P0DN82 309 aa10.88□□□□□ -0.67
USP35-207ENST00000530546 CHMP24386 653 aa10.88□□□□□ -0.67
USP35-207ENST00000530546 C21orf33P30042 268 aaPredicted RBP10.88□□□□□ -0.67
USP35-207ENST00000530546 ACTR1BP42025 376 aa10.88□□□□□ -0.67
USP35-207ENST00000530546 IDH2P48735 452 aaKnown RBP10.88□□□□□ -0.67
USP35-207ENST00000530546 NCBP2P52298 156 aaKnown RBP eCLIP10.88□□□□□ -0.67
USP35-207ENST00000530546 ACTR1AP61163 376 aa10.88□□□□□ -0.67
USP35-207ENST00000530546 ZNF79Q15937 498 aa10.88□□□□□ -0.67
USP35-207ENST00000530546 MTSS1LQ765P7 747 aa10.88□□□□□ -0.67
USP35-207ENST00000530546 ZNF367Q7RTV3 350 aa10.88□□□□□ -0.67
USP35-207ENST00000530546 UTP15Q8TED0 518 aaKnown RBP10.88□□□□□ -0.67
USP35-207ENST00000530546 GEMIN6Q8WXD5 167 aaKnown RBP10.88□□□□□ -0.67
USP35-207ENST00000530546 MVB12BQ9H7P6 319 aa10.88□□□□□ -0.67
USP35-207ENST00000530546 DDX31Q9H8H2 851 aaKnown RBP10.88□□□□□ -0.67
USP35-207ENST00000530546 IL20Q9NYY1 176 aa10.88□□□□□ -0.67
USP35-207ENST00000530546 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.88□□□□□ -0.67
USP35-207ENST00000530546 A0A0A6YYD5 115 aa10.87□□□□□ -0.67
USP35-207ENST00000530546 A0A0B4J293 547 aa10.87□□□□□ -0.67
USP35-207ENST00000530546 FAM227AF5H4B4 570 aa10.87□□□□□ -0.67
USP35-207ENST00000530546 M0R129 80 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms