RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 LOC100506127A0A0U1RQW1 187 aa5.05□□□□□ -1.6
PCF11-202ENST00000528336 HELTA6NFD8 242 aa5.05□□□□□ -1.6
PCF11-202ENST00000528336 SLCO1B7G3V0H7 640 aa5.05□□□□□ -1.6
PCF11-202ENST00000528336 H0YIG0 161 aa5.05□□□□□ -1.6
PCF11-202ENST00000528336 GOLGA8SH3BPF8 625 aa5.05□□□□□ -1.6
PCF11-202ENST00000528336 ALOX15BO15296 676 aa5.05□□□□□ -1.6
PCF11-202ENST00000528336 VPS26AO75436 327 aa5.05□□□□□ -1.6
PCF11-202ENST00000528336 RAD51DO75771 328 aa5.05□□□□□ -1.6
PCF11-202ENST00000528336 CSN3P07498 182 aa5.05□□□□□ -1.6
PCF11-202ENST00000528336 RNF224P0DH78 156 aa5.05□□□□□ -1.6
PCF11-202ENST00000528336 LHCGRP22888 699 aa5.05□□□□□ -1.6
PCF11-202ENST00000528336 NF2P35240 595 aa5.05□□□□□ -1.6
PCF11-202ENST00000528336 SLC1A3P43003 542 aa5.05□□□□□ -1.6
PCF11-202ENST00000528336 FOLH1Q04609 750 aa5.05□□□□□ -1.6
PCF11-202ENST00000528336 KLC1Q07866 573 aa5.05□□□□□ -1.6
PCF11-202ENST00000528336 ITPK1Q13572 414 aa5.05□□□□□ -1.6
PCF11-202ENST00000528336 IL18Q14116 193 aa5.05□□□□□ -1.6
PCF11-202ENST00000528336 KLHL40Q2TBA0 621 aa5.05□□□□□ -1.6
PCF11-202ENST00000528336 Q3ZCU0 254 aa5.05□□□□□ -1.6
PCF11-202ENST00000528336 C10orf120Q5SQS8 335 aa5.05□□□□□ -1.6
PCF11-202ENST00000528336 PHYHD1Q5SRE7 291 aa5.05□□□□□ -1.6
PCF11-202ENST00000528336 PRAMEF7Q5VXH5 474 aa5.05□□□□□ -1.6
PCF11-202ENST00000528336 ENPP7Q6UWV6 458 aa5.05□□□□□ -1.6
PCF11-202ENST00000528336 EFL1Q7Z2Z2 1120 aaKnown RBP5.05□□□□□ -1.6
PCF11-202ENST00000528336 CDR2LQ86X02 465 aaPredicted RBP5.05□□□□□ -1.6
PCF11-202ENST00000528336 HOGA1Q86XE5 327 aa5.05□□□□□ -1.6
PCF11-202ENST00000528336 LSMEM2Q8N112 164 aa5.05□□□□□ -1.6
PCF11-202ENST00000528336 CERS5Q8N5B7 392 aa5.05□□□□□ -1.6
PCF11-202ENST00000528336 CSGALNACT2Q8N6G5 542 aa5.05□□□□□ -1.6
PCF11-202ENST00000528336 GPRC5AQ8NFJ5 357 aa5.05□□□□□ -1.6
PCF11-202ENST00000528336 ATG101Q9BSB4 218 aa5.05□□□□□ -1.6
PCF11-202ENST00000528336 FUCA2Q9BTY2 467 aa5.05□□□□□ -1.6
PCF11-202ENST00000528336 NTMT1Q9BV86 223 aa5.05□□□□□ -1.6
PCF11-202ENST00000528336 PITPNM3Q9BZ71 974 aa5.05□□□□□ -1.6
PCF11-202ENST00000528336 FAM192AQ9GZU8 254 aa5.05□□□□□ -1.6
PCF11-202ENST00000528336 NACA2Q9H009 215 aa5.05□□□□□ -1.6
PCF11-202ENST00000528336 ZMYND12Q9H0C1 365 aa5.05□□□□□ -1.6
PCF11-202ENST00000528336 FAM49AQ9H0Q0 323 aaPredicted RBP5.05□□□□□ -1.6
PCF11-202ENST00000528336 Q9H8V8 135 aa5.05□□□□□ -1.6
PCF11-202ENST00000528336 ROPN1Q9HAT0 212 aaPredicted RBP5.05□□□□□ -1.6
PCF11-202ENST00000528336 CHST11Q9NPF2 352 aa5.05□□□□□ -1.6
PCF11-202ENST00000528336 PIGVQ9NUD9 493 aa5.05□□□□□ -1.6
PCF11-202ENST00000528336 KLHL28Q9NXS3 571 aa5.05□□□□□ -1.6
PCF11-202ENST00000528336 MIS18AQ9NYP9 233 aa5.05□□□□□ -1.6
PCF11-202ENST00000528336 TMEM181Q9P2C4 612 aa5.05□□□□□ -1.6
PCF11-202ENST00000528336 PEF1Q9UBV8 284 aaKnown RBP5.05□□□□□ -1.6
PCF11-202ENST00000528336 HBS1LQ9Y450 684 aaKnown RBP5.05□□□□□ -1.6
PCF11-202ENST00000528336 R4GN57 208 aa5.05□□□□□ -1.6
PCF11-202ENST00000528336 LY75O60449 1722 aa5.05□□□□□ -1.6
PCF11-202ENST00000528336 DLG5Q8TDM6 1919 aa5.05□□□□□ -1.6
PCF11-202ENST00000528336 RREB1Q92766 1687 aa5.05□□□□□ -1.6
PCF11-202ENST00000528336 CICQ96RK0 1608 aaPredicted RBP5.05□□□□□ -1.6
PCF11-202ENST00000528336 UBR2Q8IWV8 1755 aa5.04□□□□□ -1.6
PCF11-202ENST00000528336 A0A1W2PPK0 400 aa5.04□□□□□ -1.6
PCF11-202ENST00000528336 PPIP5K2O43314 1243 aa5.04□□□□□ -1.6
PCF11-202ENST00000528336 DCXO43602 365 aa5.04□□□□□ -1.6
PCF11-202ENST00000528336 ECE2O60344 883 aa5.04□□□□□ -1.6
PCF11-202ENST00000528336 GLRA3O75311 464 aa5.04□□□□□ -1.6
PCF11-202ENST00000528336 KHDRBS3O75525 346 aaKnown RBP5.04□□□□□ -1.6
PCF11-202ENST00000528336 GNA14O95837 355 aa5.04□□□□□ -1.6
PCF11-202ENST00000528336 CSTAP01040 98 aa5.04□□□□□ -1.6
PCF11-202ENST00000528336 SERPINB2P05120 415 aa5.04□□□□□ -1.6
PCF11-202ENST00000528336 HOXB7P09629 217 aa5.04□□□□□ -1.6
PCF11-202ENST00000528336 TROVE2P10155 538 aaKnown RBP eCLIP5.04□□□□□ -1.6
PCF11-202ENST00000528336 ZNF18P17022 549 aa5.04□□□□□ -1.6
PCF11-202ENST00000528336 ELAVL4P26378 380 aaKnown RBP5.04□□□□□ -1.6
PCF11-202ENST00000528336 HTR2AP28223 471 aa5.04□□□□□ -1.6
PCF11-202ENST00000528336 ALDH1B1P30837 517 aa5.04□□□□□ -1.6
PCF11-202ENST00000528336 S100A5P33763 92 aa5.04□□□□□ -1.6
PCF11-202ENST00000528336 RGS7P49802 495 aa5.04□□□□□ -1.6
PCF11-202ENST00000528336 VAMP7P51809 220 aa5.04□□□□□ -1.6
PCF11-202ENST00000528336 NOP14P78316 857 aaKnown RBP5.04□□□□□ -1.6
PCF11-202ENST00000528336 BNIP1Q12981 228 aa5.04□□□□□ -1.6
PCF11-202ENST00000528336 DNAJC3Q13217 504 aa5.04□□□□□ -1.6
PCF11-202ENST00000528336 CUL1Q13616 776 aa5.04□□□□□ -1.6
PCF11-202ENST00000528336 SGSM1Q2NKQ1 1148 aa5.04□□□□□ -1.6
PCF11-202ENST00000528336 LRRC73Q5JTD7 316 aa5.04□□□□□ -1.6
PCF11-202ENST00000528336 ZC2HC1BQ5TFG8 222 aa5.04□□□□□ -1.6
PCF11-202ENST00000528336 G2E3Q7L622 706 aa5.04□□□□□ -1.6
PCF11-202ENST00000528336 MISPQ8IVT2 679 aa5.04□□□□□ -1.6
PCF11-202ENST00000528336 OR5AP2Q8NGF4 316 aa5.04□□□□□ -1.6
PCF11-202ENST00000528336 OR10Q1Q8NGQ4 319 aa5.04□□□□□ -1.6
PCF11-202ENST00000528336 PROX1Q92786 737 aa5.04□□□□□ -1.6
PCF11-202ENST00000528336 BTBD9Q96Q07 612 aa5.04□□□□□ -1.6
PCF11-202ENST00000528336 SIRPDQ9H106 197 aa5.04□□□□□ -1.6
PCF11-202ENST00000528336 TMEM231Q9H6L2 316 aa5.04□□□□□ -1.6
PCF11-202ENST00000528336 DCTPP1Q9H773 170 aa5.04□□□□□ -1.6
PCF11-202ENST00000528336 DNAJC4Q9NNZ3 241 aa5.04□□□□□ -1.6
PCF11-202ENST00000528336 TXNDC16Q9P2K2 825 aa5.04□□□□□ -1.6
PCF11-202ENST00000528336 C19orf25Q9UFG5 118 aaPredicted RBP5.04□□□□□ -1.6
PCF11-202ENST00000528336 KDM3BQ7LBC6 1761 aa5.04□□□□□ -1.6
PCF11-202ENST00000528336 NUP188Q5SRE5 1749 aa5.03□□□□□ -1.6
PCF11-202ENST00000528336 PFASO15067 1338 aa5.03□□□□□ -1.6
PCF11-202ENST00000528336 FANCIQ9NVI1 1328 aa5.03□□□□□ -1.6
PCF11-202ENST00000528336 C5P01031 1676 aa5.03□□□□□ -1.6
PCF11-202ENST00000528336 A0A0U1RQV5 110 aa5.03□□□□□ -1.6
PCF11-202ENST00000528336 FAM240BA0A1B0GVZ2 78 aa5.03□□□□□ -1.6
PCF11-202ENST00000528336 TTC26A0AVF1 554 aa5.03□□□□□ -1.6
PCF11-202ENST00000528336 ILVBLA1L0T0 632 aa5.03□□□□□ -1.6
PCF11-202ENST00000528336 MBLAC1A4D2B0 266 aaPredicted RBP5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms