RNA–Protein interactions for RNA: ENST00000528165.5

CAPN1-214, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 2,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-214ENST00000528165 ADAM12O43184 909 aa13.81□□□□□ -0.2
CAPN1-214ENST00000528165 TSPAN6O43657 245 aa13.81□□□□□ -0.2
CAPN1-214ENST00000528165 RGS9O75916 674 aaPredicted RBP13.81□□□□□ -0.2
CAPN1-214ENST00000528165 UBXN7O94888 489 aa13.81□□□□□ -0.2
CAPN1-214ENST00000528165 C1GALT1C1LP0DN25 315 aa13.81□□□□□ -0.2
CAPN1-214ENST00000528165 PEPDP12955 493 aa13.81□□□□□ -0.2
CAPN1-214ENST00000528165 MTNR1BP49286 362 aa13.81□□□□□ -0.2
CAPN1-214ENST00000528165 ACSM1Q08AH1 577 aa13.81□□□□□ -0.2
CAPN1-214ENST00000528165 HSPB3Q12988 150 aa13.81□□□□□ -0.2
CAPN1-214ENST00000528165 PLD1Q13393 1074 aa13.81□□□□□ -0.2
CAPN1-214ENST00000528165 CLEC12AQ5QGZ9 265 aa13.81□□□□□ -0.2
CAPN1-214ENST00000528165 KIAA1161Q6NSJ0 714 aa13.81□□□□□ -0.2
CAPN1-214ENST00000528165 LYPD4Q6UWN0 246 aa13.81□□□□□ -0.2
CAPN1-214ENST00000528165 USP50Q70EL3 339 aaPredicted RBP13.81□□□□□ -0.2
CAPN1-214ENST00000528165 NR2C2APQ86WQ0 139 aa13.81□□□□□ -0.2
CAPN1-214ENST00000528165 FBXO15Q8NCQ5 510 aaPredicted RBP13.81□□□□□ -0.2
CAPN1-214ENST00000528165 OR5P2Q8WZ92 322 aa13.81□□□□□ -0.2
CAPN1-214ENST00000528165 HSD17B8Q92506 261 aa13.81□□□□□ -0.2
CAPN1-214ENST00000528165 UPF1Q92900 1129 aaKnown RBP eCLIP13.81□□□□□ -0.22e-10■■■■□ 24.6
CAPN1-214ENST00000528165 RADILQ96JH8 1075 aa13.81□□□□□ -0.2
CAPN1-214ENST00000528165 SORBS1Q9BX66 1292 aaKnown RBP13.81□□□□□ -0.2
CAPN1-214ENST00000528165 MAN2C1Q9NTJ4 1040 aa13.81□□□□□ -0.2
CAPN1-214ENST00000528165 MARCH5Q9NX47 278 aa13.81□□□□□ -0.2
CAPN1-214ENST00000528165 RABL2BQ9UNT1 228 aa13.81□□□□□ -0.2
CAPN1-214ENST00000528165 SH2B3Q9UQQ2 575 aa13.81□□□□□ -0.2
CAPN1-214ENST00000528165 MEIKINA0A087WXM9 373 aa13.8□□□□□ -0.2
CAPN1-214ENST00000528165 DVL2O14641 736 aa13.8□□□□□ -0.2
CAPN1-214ENST00000528165 SSNA1O43805 119 aa13.8□□□□□ -0.2
CAPN1-214ENST00000528165 CFDP00746 253 aaPredicted RBP13.8□□□□□ -0.2
CAPN1-214ENST00000528165 GIFP27352 417 aa13.8□□□□□ -0.2
CAPN1-214ENST00000528165 GBX2P52951 348 aaPredicted RBP13.8□□□□□ -0.2
CAPN1-214ENST00000528165 RPL6Q02878 288 aaKnown RBP13.8□□□□□ -0.2
CAPN1-214ENST00000528165 EOGTQ5NDL2 527 aa13.8□□□□□ -0.2
CAPN1-214ENST00000528165 HACD4Q5VWC8 232 aa13.8□□□□□ -0.2
CAPN1-214ENST00000528165 KIAA1324Q6UXG2 1013 aaKnown RBP13.8□□□□□ -0.2
CAPN1-214ENST00000528165 CHMP1BQ7LBR1 199 aa13.8□□□□□ -0.2
CAPN1-214ENST00000528165 TECPR1Q7Z6L1 1165 aa13.8□□□□□ -0.2
CAPN1-214ENST00000528165 METTL3Q86U44 580 aaKnown RBP13.8□□□□□ -0.2
CAPN1-214ENST00000528165 TOMM5Q8N4H5 51 aa13.8□□□□□ -0.2
CAPN1-214ENST00000528165 TBC1D19Q8N5T2 526 aa13.8□□□□□ -0.2
CAPN1-214ENST00000528165 MORN4Q8NDC4 146 aa13.8□□□□□ -0.2
CAPN1-214ENST00000528165 LINC01599Q8WXQ3 324 aa13.8□□□□□ -0.2
CAPN1-214ENST00000528165 RBCK1Q9BYM8 510 aa13.8□□□□□ -0.2
CAPN1-214ENST00000528165 ERVMER34-1Q9H9K5 563 aa13.8□□□□□ -0.2
CAPN1-214ENST00000528165 SLAMF7Q9NQ25 335 aa13.8□□□□□ -0.2
CAPN1-214ENST00000528165 SCP2D1Q9UJQ7 156 aa13.8□□□□□ -0.2
CAPN1-214ENST00000528165 SCML1Q9UN30 329 aa13.8□□□□□ -0.2
CAPN1-214ENST00000528165 PPIL1Q9Y3C6 166 aa13.8□□□□□ -0.2
CAPN1-214ENST00000528165 NPC1O15118 1278 aa13.8□□□□□ -0.2
CAPN1-214ENST00000528165 CASC3O15234 703 aaKnown RBP13.8□□□□□ -0.2
CAPN1-214ENST00000528165 NPPBP16860 134 aa13.8□□□□□ -0.2
CAPN1-214ENST00000528165 GALP22466 123 aa13.8□□□□□ -0.2
CAPN1-214ENST00000528165 RIPPLY1Q0D2K3 151 aa13.8□□□□□ -0.2
CAPN1-214ENST00000528165 DBPQ10586 325 aaPredicted RBP13.8□□□□□ -0.2
CAPN1-214ENST00000528165 HSD17B12Q53GQ0 312 aa13.8□□□□□ -0.2
CAPN1-214ENST00000528165 VASNQ6EMK4 673 aa13.8□□□□□ -0.2
CAPN1-214ENST00000528165 COMTD1Q86VU5 262 aa13.8□□□□□ -0.2
CAPN1-214ENST00000528165 LRRC56Q8IYG6 542 aaPredicted RBP13.8□□□□□ -0.2
CAPN1-214ENST00000528165 MS4A15Q8N5U1 240 aa13.8□□□□□ -0.2
CAPN1-214ENST00000528165 OR52N1Q8NH53 320 aa13.8□□□□□ -0.2
CAPN1-214ENST00000528165 ZNF480Q8WV37 535 aa13.8□□□□□ -0.2
CAPN1-214ENST00000528165 TOE1Q96GM8 510 aaKnown RBP13.8□□□□□ -0.2
CAPN1-214ENST00000528165 ERMAPQ96PL5 475 aaPredicted RBP13.8□□□□□ -0.2
CAPN1-214ENST00000528165 CACNG6Q9BXT2 260 aa13.8□□□□□ -0.2
CAPN1-214ENST00000528165 CDCP1Q9H5V8 836 aa13.8□□□□□ -0.2
CAPN1-214ENST00000528165 ZDHHC6Q9H6R6 413 aa13.8□□□□□ -0.2
CAPN1-214ENST00000528165 DLL4Q9NR61 685 aa13.8□□□□□ -0.2
CAPN1-214ENST00000528165 COPZ2Q9P299 210 aa13.8□□□□□ -0.2
CAPN1-214ENST00000528165 CENPFP49454 3210 aa13.8□□□□□ -0.2
CAPN1-214ENST00000528165 DOCK6Q96HP0 2047 aa13.79□□□□□ -0.2
CAPN1-214ENST00000528165 RPL17P18621 184 aaKnown RBP13.79□□□□□ -0.2
CAPN1-214ENST00000528165 NPR2P20594 1047 aa13.79□□□□□ -0.2
CAPN1-214ENST00000528165 MMP12P39900 470 aa13.79□□□□□ -0.2
CAPN1-214ENST00000528165 MAP2K6P52564 334 aa13.79□□□□□ -0.2
CAPN1-214ENST00000528165 VSX2P58304 361 aaPredicted RBP13.79□□□□□ -0.2
CAPN1-214ENST00000528165 CRYZQ08257 329 aaKnown RBP13.79□□□□□ -0.2
CAPN1-214ENST00000528165 MAP4K2Q12851 820 aa13.79□□□□□ -0.2
CAPN1-214ENST00000528165 SYPL1Q16563 259 aa13.79□□□□□ -0.2
CAPN1-214ENST00000528165 PYHIN1Q6K0P9 492 aa13.79□□□□□ -0.2
CAPN1-214ENST00000528165 TMEM81Q6P7N7 255 aa13.79□□□□□ -0.2
CAPN1-214ENST00000528165 TAS1R1Q7RTX1 841 aa13.79□□□□□ -0.2
CAPN1-214ENST00000528165 SZRD1Q7Z422 152 aa13.79□□□□□ -0.2
CAPN1-214ENST00000528165 SLC43A3Q8NBI5 491 aa13.79□□□□□ -0.2
CAPN1-214ENST00000528165 ZBTB44Q8NCP5 570 aa13.79□□□□□ -0.2
CAPN1-214ENST00000528165 OR8D4Q8NGM9 314 aa13.79□□□□□ -0.2
CAPN1-214ENST00000528165 ADAMTS14Q8WXS8 1223 aa13.79□□□□□ -0.2
CAPN1-214ENST00000528165 KCTD12Q96CX2 325 aaKnown RBP13.79□□□□□ -0.2
CAPN1-214ENST00000528165 ZNF578Q96N58 590 aaPredicted RBP13.79□□□□□ -0.2
CAPN1-214ENST00000528165 ABHD1Q96SE0 405 aa13.79□□□□□ -0.2
CAPN1-214ENST00000528165 TMEM175Q9BSA9 504 aa13.79□□□□□ -0.2
CAPN1-214ENST00000528165 SMG9Q9H0W8 520 aaKnown RBP13.79□□□□□ -0.2
CAPN1-214ENST00000528165 NEUROD4Q9HD90 331 aa13.79□□□□□ -0.2
CAPN1-214ENST00000528165 GSAPA4D1B5 854 aa13.79□□□□□ -0.2
CAPN1-214ENST00000528165 KHNYNO15037 678 aaKnown RBP13.79□□□□□ -0.2
CAPN1-214ENST00000528165 TPPPO94811 219 aa13.79□□□□□ -0.2
CAPN1-214ENST00000528165 TOXO94900 526 aa13.79□□□□□ -0.2
CAPN1-214ENST00000528165 CH25HO95992 272 aa13.79□□□□□ -0.2
CAPN1-214ENST00000528165 SULT1A3P0DMM9 295 aa13.79□□□□□ -0.2
CAPN1-214ENST00000528165 SULT1A4P0DMN0 295 aa13.79□□□□□ -0.2
CAPN1-214ENST00000528165 SLC11A1P49279 550 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms