RNA–Protein interactions for RNA: ENST00000527881.1

TSKU-203, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSKU, Length 3,554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-203ENST00000527881 MTG2Q9H4K7 406 aa11.79□□□□□ -0.52
TSKU-203ENST00000527881 ZSCAN32Q9NX65 697 aa11.79□□□□□ -0.52
TSKU-203ENST00000527881 NOD1Q9Y239 953 aa11.79□□□□□ -0.52
TSKU-203ENST00000527881 ARL5CA6NH57 179 aa11.79□□□□□ -0.52
TSKU-203ENST00000527881 BNIP3LO60238 219 aa11.79□□□□□ -0.52
TSKU-203ENST00000527881 EFCAB14O75071 495 aa11.79□□□□□ -0.52
TSKU-203ENST00000527881 ATG12O94817 140 aa11.79□□□□□ -0.52
TSKU-203ENST00000527881 TGM6O95932 706 aa11.79□□□□□ -0.52
TSKU-203ENST00000527881 ATP5A1P25705 553 aaKnown RBP11.79□□□□□ -0.52
TSKU-203ENST00000527881 AOAHP28039 575 aa11.79□□□□□ -0.52
TSKU-203ENST00000527881 MLLT1Q03111 559 aaPredicted RBP11.79□□□□□ -0.52
TSKU-203ENST00000527881 CHRNA6Q15825 494 aa11.79□□□□□ -0.52
TSKU-203ENST00000527881 ZNF385BQ569K4 471 aa11.79□□□□□ -0.52
TSKU-203ENST00000527881 GPRC6AQ5T6X5 926 aa11.79□□□□□ -0.52
TSKU-203ENST00000527881 ZNF770Q6IQ21 691 aaPredicted RBP11.79□□□□□ -0.52
TSKU-203ENST00000527881 LRRN1Q6UXK5 716 aa11.79□□□□□ -0.52
TSKU-203ENST00000527881 Q6ZTK2 550 aa11.79□□□□□ -0.52
TSKU-203ENST00000527881 BTN2A1Q7KYR7 527 aa11.79□□□□□ -0.52
TSKU-203ENST00000527881 HS6ST3Q8IZP7 471 aa11.79□□□□□ -0.52
TSKU-203ENST00000527881 KRT78Q8N1N4 520 aa11.79□□□□□ -0.52
TSKU-203ENST00000527881 WDR20Q8TBZ3 569 aa11.79□□□□□ -0.52
TSKU-203ENST00000527881 SLC7A13Q8TCU3 470 aa11.79□□□□□ -0.52
TSKU-203ENST00000527881 WRAP53Q9BUR4 548 aaKnown RBP11.79□□□□□ -0.52
TSKU-203ENST00000527881 NKX6-2Q9C056 277 aaPredicted RBP11.79□□□□□ -0.52
TSKU-203ENST00000527881 EGLN3Q9H6Z9 239 aa11.79□□□□□ -0.52
TSKU-203ENST00000527881 WDR26Q9H7D7 661 aa11.79□□□□□ -0.52
TSKU-203ENST00000527881 SEC14L3Q9UDX4 400 aa11.79□□□□□ -0.52
TSKU-203ENST00000527881 ZFP37Q9Y6Q3 630 aaPredicted RBP11.79□□□□□ -0.52
TSKU-203ENST00000527881 TP53BP1Q12888 1972 aaPredicted RBP11.79□□□□□ -0.52
TSKU-203ENST00000527881 LINC00587B1AMM8 73 aa11.79□□□□□ -0.52
TSKU-203ENST00000527881 ARPC1BO15143 372 aaKnown RBP11.79□□□□□ -0.52
TSKU-203ENST00000527881 SIGLEC6O43699 453 aa11.79□□□□□ -0.52
TSKU-203ENST00000527881 SSX5O60225 188 aa11.79□□□□□ -0.52
TSKU-203ENST00000527881 OR5F1O95221 314 aa11.79□□□□□ -0.52
TSKU-203ENST00000527881 MMP3P08254 477 aa11.79□□□□□ -0.52
TSKU-203ENST00000527881 C1SP09871 688 aa11.79□□□□□ -0.52
TSKU-203ENST00000527881 PVALBP20472 110 aaPredicted RBP11.79□□□□□ -0.52
TSKU-203ENST00000527881 LIMS1P48059 325 aa11.79□□□□□ -0.52
TSKU-203ENST00000527881 RHOAP61586 193 aa11.79□□□□□ -0.52
TSKU-203ENST00000527881 S100A12P80511 92 aa11.79□□□□□ -0.52
TSKU-203ENST00000527881 OR5M10Q6IEU7 315 aa11.79□□□□□ -0.52
TSKU-203ENST00000527881 REEP3Q6NUK4 255 aa11.79□□□□□ -0.52
TSKU-203ENST00000527881 CDC73Q6P1J9 531 aa11.79□□□□□ -0.52
TSKU-203ENST00000527881 RNF165Q6ZSG1 346 aa11.79□□□□□ -0.52
TSKU-203ENST00000527881 OAFQ86UD1 273 aa11.79□□□□□ -0.52
TSKU-203ENST00000527881 OR5T2Q8NGG2 359 aa11.79□□□□□ -0.52
TSKU-203ENST00000527881 NANPQ8TBE9 248 aa11.79□□□□□ -0.52
TSKU-203ENST00000527881 SYT17Q9BSW7 474 aa11.79□□□□□ -0.52
TSKU-203ENST00000527881 ZFYVE1Q9HBF4 777 aa11.79□□□□□ -0.52
TSKU-203ENST00000527881 IL20Q9NYY1 176 aa11.79□□□□□ -0.52
TSKU-203ENST00000527881 FBXW2Q9UKT8 454 aa11.79□□□□□ -0.52
TSKU-203ENST00000527881 AP1M2Q9Y6Q5 423 aa11.79□□□□□ -0.52
TSKU-203ENST00000527881 RLFQ13129 1914 aa11.78□□□□□ -0.52
TSKU-203ENST00000527881 A0A1W2PPK0 400 aa11.78□□□□□ -0.52
TSKU-203ENST00000527881 OR6C74A6NCV1 312 aa11.78□□□□□ -0.52
TSKU-203ENST00000527881 PRAMEF4O60810 478 aa11.78□□□□□ -0.52
TSKU-203ENST00000527881 S100A9P06702 114 aaKnown RBP11.78□□□□□ -0.52
TSKU-203ENST00000527881 DRD2P14416 443 aa11.78□□□□□ -0.52
TSKU-203ENST00000527881 S100A11P31949 105 aa11.78□□□□□ -0.52
TSKU-203ENST00000527881 SLC16A1P53985 500 aa11.78□□□□□ -0.52
TSKU-203ENST00000527881 AP1S2P56377 157 aa11.78□□□□□ -0.52
TSKU-203ENST00000527881 GK2Q14410 553 aaPredicted RBP11.78□□□□□ -0.52
TSKU-203ENST00000527881 PRAMEF9Q5VWM5 478 aa11.78□□□□□ -0.52
TSKU-203ENST00000527881 HBMQ6B0K9 141 aa11.78□□□□□ -0.52
TSKU-203ENST00000527881 TRMT11Q7Z4G4 463 aaKnown RBP11.78□□□□□ -0.52
TSKU-203ENST00000527881 ZER1Q7Z7L7 766 aa11.78□□□□□ -0.52
TSKU-203ENST00000527881 FBXO15Q8NCQ5 510 aaPredicted RBP11.78□□□□□ -0.52
TSKU-203ENST00000527881 OR4K5Q8NGD3 323 aa11.78□□□□□ -0.52
TSKU-203ENST00000527881 ZNF671Q8TAW3 534 aa11.78□□□□□ -0.52
TSKU-203ENST00000527881 YIPF5Q969M3 257 aa11.78□□□□□ -0.52
TSKU-203ENST00000527881 FUBP3Q96I24 572 aaKnown RBP eCLIP11.78□□□□□ -0.52
TSKU-203ENST00000527881 ACTR6Q9GZN1 396 aa11.78□□□□□ -0.52
TSKU-203ENST00000527881 MVB12BQ9H7P6 319 aa11.78□□□□□ -0.52
TSKU-203ENST00000527881 ELP3Q9H9T3 547 aa11.78□□□□□ -0.52
TSKU-203ENST00000527881 MIEF1Q9NQG6 463 aa11.78□□□□□ -0.52
TSKU-203ENST00000527881 TESQ9UGI8 421 aaKnown RBP11.78□□□□□ -0.52
TSKU-203ENST00000527881 SLC9B1P1A6NJY1 282 aa11.78□□□□□ -0.52
TSKU-203ENST00000527881 DISC1C4P0D8 188 aa11.78□□□□□ -0.52
TSKU-203ENST00000527881 LRRN3E7EW58 273 aa11.78□□□□□ -0.52
TSKU-203ENST00000527881 SOX30O94993 753 aa11.78□□□□□ -0.52
TSKU-203ENST00000527881 DUSP4Q13115 394 aa11.78□□□□□ -0.52
TSKU-203ENST00000527881 IER5LQ5T953 404 aa11.78□□□□□ -0.52
TSKU-203ENST00000527881 TAPT1Q6NXT6 567 aa11.78□□□□□ -0.52
TSKU-203ENST00000527881 C11orf88Q6PI97 169 aa11.78□□□□□ -0.52
TSKU-203ENST00000527881 ZNF600Q6ZNG1 722 aa11.78□□□□□ -0.52
TSKU-203ENST00000527881 IKBIPQ70UQ0 350 aa11.78□□□□□ -0.52
TSKU-203ENST00000527881 LINGO2Q7L985 606 aa11.78□□□□□ -0.52
TSKU-203ENST00000527881 TECPR1Q7Z6L1 1165 aa11.78□□□□□ -0.52
TSKU-203ENST00000527881 PDXPQ96GD0 296 aa11.78□□□□□ -0.52
TSKU-203ENST00000527881 TSNAXQ99598 290 aaKnown RBP11.78□□□□□ -0.52
TSKU-203ENST00000527881 TREX2Q9BQ50 279 aaPredicted RBP11.78□□□□□ -0.52
TSKU-203ENST00000527881 MAGEH1Q9H213 219 aa11.78□□□□□ -0.52
TSKU-203ENST00000527881 LRRN3Q9H3W5 708 aa11.78□□□□□ -0.52
TSKU-203ENST00000527881 PDFQ9HBH1 243 aa11.78□□□□□ -0.52
TSKU-203ENST00000527881 DSPPQ9NZW4 1301 aa11.78□□□□□ -0.52
TSKU-203ENST00000527881 KCNE1BA0A087WTH5 132 aa11.78□□□□□ -0.52
TSKU-203ENST00000527881 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.78□□□□□ -0.52
TSKU-203ENST00000527881 MTMR11A4FU01 709 aa11.78□□□□□ -0.52
TSKU-203ENST00000527881 PIP5K1CO60331 668 aa11.78□□□□□ -0.52
TSKU-203ENST00000527881 RGS9O75916 674 aaPredicted RBP11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms