RNA–Protein interactions for RNA: ENST00000527644.1

TSPAN4-217, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 968 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-217ENST00000527644 MTERF3Q96E29 417 aa24.14■■□□□ 1.45
TSPAN4-217ENST00000527644 SLC35A4Q96G79 324 aa24.14■■□□□ 1.45
TSPAN4-217ENST00000527644 C3orf30Q96M34 536 aa24.14■■□□□ 1.45
TSPAN4-217ENST00000527644 COL21A1Q96P44 957 aa24.14■■□□□ 1.45
TSPAN4-217ENST00000527644 NODALQ96S42 347 aa24.14■■□□□ 1.45
TSPAN4-217ENST00000527644 EXO5Q9H790 373 aa24.14■■□□□ 1.45
TSPAN4-217ENST00000527644 DDX18Q9NVP1 670 aaKnown RBP24.14■■□□□ 1.45
TSPAN4-217ENST00000527644 SH3BP4Q9P0V3 963 aa24.14■■□□□ 1.45
TSPAN4-217ENST00000527644 NCOA6Q14686 2063 aaPredicted RBP24.14■■□□□ 1.45
TSPAN4-217ENST00000527644 NAV2Q8IVL1 2488 aa24.13■■□□□ 1.45
TSPAN4-217ENST00000527644 ITM2AO43736 263 aa24.13■■□□□ 1.45
TSPAN4-217ENST00000527644 SKAP2O75563 359 aaPredicted RBP24.13■■□□□ 1.45
TSPAN4-217ENST00000527644 LYPLA1O75608 230 aaPredicted RBP24.13■■□□□ 1.45
TSPAN4-217ENST00000527644 DDX5P17844 614 aaKnown RBP24.13■■□□□ 1.45
TSPAN4-217ENST00000527644 GRK2P25098 689 aa24.13■■□□□ 1.45
TSPAN4-217ENST00000527644 GDF1P27539 372 aa24.13■■□□□ 1.45
TSPAN4-217ENST00000527644 ZNF155Q12901 538 aaPredicted RBP24.13■■□□□ 1.45
TSPAN4-217ENST00000527644 BEND6Q5SZJ8 279 aaPredicted RBP24.13■■□□□ 1.45
TSPAN4-217ENST00000527644 DESI1Q6ICB0 168 aa24.13■■□□□ 1.45
TSPAN4-217ENST00000527644 TMEM211Q6ICI0 200 aa24.13■■□□□ 1.45
TSPAN4-217ENST00000527644 ANKRD26P1Q6NSI1 321 aa24.13■■□□□ 1.45
TSPAN4-217ENST00000527644 R3HCC1LQ7Z5L2 792 aaKnown RBP24.13■■□□□ 1.45
TSPAN4-217ENST00000527644 SLC44A2Q8IWA5 706 aaPredicted RBP24.13■■□□□ 1.45
TSPAN4-217ENST00000527644 ZFP28Q8NHY6 868 aa24.13■■□□□ 1.45
TSPAN4-217ENST00000527644 TMCO6Q96DC7 493 aa24.13■■□□□ 1.45
TSPAN4-217ENST00000527644 GIMAP2Q9UG22 337 aa24.13■■□□□ 1.45
TSPAN4-217ENST00000527644 PRSS44E7EML9 344 aa24.12■■□□□ 1.45
TSPAN4-217ENST00000527644 PSMG1O95456 288 aa24.12■■□□□ 1.45
TSPAN4-217ENST00000527644 ELAVL4P26378 380 aaKnown RBP24.12■■□□□ 1.45
TSPAN4-217ENST00000527644 KRT20P35900 424 aa24.12■■□□□ 1.45
TSPAN4-217ENST00000527644 EFR3AQ14156 821 aa24.12■■□□□ 1.45
TSPAN4-217ENST00000527644 ZNF385BQ569K4 471 aa24.12■■□□□ 1.45
TSPAN4-217ENST00000527644 C6orf136Q5SQH8 315 aa24.12■■□□□ 1.45
TSPAN4-217ENST00000527644 FNDC7Q5VTL7 733 aa24.12■■□□□ 1.45
TSPAN4-217ENST00000527644 NCCRP1Q6ZVX7 275 aaPredicted RBP24.12■■□□□ 1.45
TSPAN4-217ENST00000527644 ZNF551Q7Z340 670 aaPredicted RBP24.12■■□□□ 1.45
TSPAN4-217ENST00000527644 CIDECQ96AQ7 238 aaPredicted RBP24.12■■□□□ 1.45
TSPAN4-217ENST00000527644 ZBED6CLQ96FA7 236 aaPredicted RBP24.12■■□□□ 1.45
TSPAN4-217ENST00000527644 GNRHR2Q96P88 292 aa24.12■■□□□ 1.45
TSPAN4-217ENST00000527644 OSBPL11Q9BXB4 747 aa24.12■■□□□ 1.45
TSPAN4-217ENST00000527644 UBQLN3Q9H347 655 aa24.12■■□□□ 1.45
TSPAN4-217ENST00000527644 PNPLA3Q9NST1 481 aa24.12■■□□□ 1.45
TSPAN4-217ENST00000527644 ACAD8Q9UKU7 415 aa24.12■■□□□ 1.45
TSPAN4-217ENST00000527644 EPB41L3Q9Y2J2 1087 aaPredicted RBP24.12■■□□□ 1.45
TSPAN4-217ENST00000527644 OR10H1Q9Y4A9 318 aa24.12■■□□□ 1.45
TSPAN4-217ENST00000527644 CENPEQ02224 2701 aa24.12■■□□□ 1.45
TSPAN4-217ENST00000527644 TSPAN2O60636 221 aa24.11■■□□□ 1.45
TSPAN4-217ENST00000527644 ICOSLGO75144 302 aa24.11■■□□□ 1.45
TSPAN4-217ENST00000527644 RPL3P39023 403 aaKnown RBP24.11■■□□□ 1.45
TSPAN4-217ENST00000527644 DCTP40126 519 aa24.11■■□□□ 1.45
TSPAN4-217ENST00000527644 FRKP42685 505 aaPredicted RBP24.11■■□□□ 1.45
TSPAN4-217ENST00000527644 PNLIPRP2P54317 469 aa24.11■■□□□ 1.45
TSPAN4-217ENST00000527644 PSG6Q00889 435 aa24.11■■□□□ 1.45
TSPAN4-217ENST00000527644 HSPB3Q12988 150 aa24.11■■□□□ 1.45
TSPAN4-217ENST00000527644 TIGD3Q6B0B8 471 aa24.11■■□□□ 1.45
TSPAN4-217ENST00000527644 LARP4Q71RC2 724 aaKnown RBP eCLIP24.11■■□□□ 1.452e-6■■■■■ 32.5
TSPAN4-217ENST00000527644 LIX1Q8N485 282 aa24.11■■□□□ 1.45
TSPAN4-217ENST00000527644 FNDC5Q8NAU1 212 aa24.11■■□□□ 1.45
TSPAN4-217ENST00000527644 OR5M9Q8NGP3 310 aa24.11■■□□□ 1.45
TSPAN4-217ENST00000527644 NEIL3Q8TAT5 605 aa24.11■■□□□ 1.45
TSPAN4-217ENST00000527644 TUBGCP3Q96CW5 907 aa24.11■■□□□ 1.45
TSPAN4-217ENST00000527644 ADOQ96SZ5 270 aa24.11■■□□□ 1.45
TSPAN4-217ENST00000527644 ZNF395Q9H8N7 513 aaPredicted RBP24.11■■□□□ 1.45
TSPAN4-217ENST00000527644 ACSS1Q9NUB1 689 aaPredicted RBP24.11■■□□□ 1.45
TSPAN4-217ENST00000527644 KLRF1Q9NZS2 232 aa24.11■■□□□ 1.45
TSPAN4-217ENST00000527644 ATP6V1HQ9UI12 483 aa24.11■■□□□ 1.45
TSPAN4-217ENST00000527644 C15orf41Q9Y2V0 281 aa24.11■■□□□ 1.45
TSPAN4-217ENST00000527644 RAP2CQ9Y3L5 183 aa24.11■■□□□ 1.45
TSPAN4-217ENST00000527644 PRAMEF25A6NGN4 478 aa24.1■■□□□ 1.45
TSPAN4-217ENST00000527644 PRPS2P11908 318 aa24.1■■□□□ 1.45
TSPAN4-217ENST00000527644 ENDOUP21128 410 aaKnown RBP24.1■■□□□ 1.45
TSPAN4-217ENST00000527644 IL12BP29460 328 aa24.1■■□□□ 1.45
TSPAN4-217ENST00000527644 GPC1P35052 558 aa24.1■■□□□ 1.45
TSPAN4-217ENST00000527644 HPCAL1P37235 193 aa24.1■■□□□ 1.45
TSPAN4-217ENST00000527644 PTGDSP41222 190 aa24.1■■□□□ 1.45
TSPAN4-217ENST00000527644 SLC1A6P48664 564 aa24.1■■□□□ 1.45
TSPAN4-217ENST00000527644 MANFP55145 182 aaKnown RBP24.1■■□□□ 1.45
TSPAN4-217ENST00000527644 MRPS22P82650 360 aaKnown RBP24.1■■□□□ 1.45
TSPAN4-217ENST00000527644 ZNHIT3Q15649 155 aaPredicted RBP24.1■■□□□ 1.45
TSPAN4-217ENST00000527644 CYP27C1Q4G0S4 372 aa24.1■■□□□ 1.45
TSPAN4-217ENST00000527644 WLSQ5T9L3 541 aa24.1■■□□□ 1.45
TSPAN4-217ENST00000527644 KIRREL3Q8IZU9 778 aa24.1■■□□□ 1.45
TSPAN4-217ENST00000527644 ZNF781Q8N8C0 355 aa24.1■■□□□ 1.45
TSPAN4-217ENST00000527644 OR1J4Q8NGS1 313 aa24.1■■□□□ 1.45
TSPAN4-217ENST00000527644 SLC6A15Q9H2J7 730 aa24.1■■□□□ 1.45
TSPAN4-217ENST00000527644 NCKAP5O14513 1909 aa24.1■■□□□ 1.45
TSPAN4-217ENST00000527644 TTC36A6NLP5 189 aa24.09■■□□□ 1.45
TSPAN4-217ENST00000527644 FIGNL2A6NMB9 653 aa24.09■■□□□ 1.45
TSPAN4-217ENST00000527644 GNB5O14775 395 aa24.09■■□□□ 1.45
TSPAN4-217ENST00000527644 SNPHO15079 494 aa24.09■■□□□ 1.45
TSPAN4-217ENST00000527644 TRAPPC6AO75865 159 aa24.09■■□□□ 1.45
TSPAN4-217ENST00000527644 HPNP05981 417 aa24.09■■□□□ 1.45
TSPAN4-217ENST00000527644 BGNP21810 368 aa24.09■■□□□ 1.45
TSPAN4-217ENST00000527644 CDK9P50750 372 aaKnown RBP24.09■■□□□ 1.45
TSPAN4-217ENST00000527644 HHATQ5VTY9 493 aa24.09■■□□□ 1.45
TSPAN4-217ENST00000527644 IL23RQ5VWK5 629 aa24.09■■□□□ 1.45
TSPAN4-217ENST00000527644 SP5Q6BEB4 398 aaPredicted RBP24.09■■□□□ 1.45
TSPAN4-217ENST00000527644 ZNF787Q6DD87 383 aa24.09■■□□□ 1.45
TSPAN4-217ENST00000527644 ZNF585AQ6P3V2 769 aa24.09■■□□□ 1.45
TSPAN4-217ENST00000527644 ANGPTL8Q6UXH0 198 aa24.09■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms