RNA–Protein interactions for RNA: ENST00000526280.1

SMPD1-202, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,344 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-202ENST00000526280 MSANTD1Q6ZTZ1 278 aa11.91□□□□□ -0.5
SMPD1-202ENST00000526280 SZRD1Q7Z422 152 aa11.91□□□□□ -0.5
SMPD1-202ENST00000526280 WDR53Q7Z5U6 358 aaPredicted RBP11.91□□□□□ -0.5
SMPD1-202ENST00000526280 SLC44A2Q8IWA5 706 aaPredicted RBP11.91□□□□□ -0.5
SMPD1-202ENST00000526280 PRR22Q8IZ63 422 aa11.91□□□□□ -0.5
SMPD1-202ENST00000526280 SLC34A3Q8N130 599 aa11.91□□□□□ -0.5
SMPD1-202ENST00000526280 CDRT4Q8N9R6 151 aa11.91□□□□□ -0.5
SMPD1-202ENST00000526280 GOLM1Q8NBJ4 401 aa11.91□□□□□ -0.5
SMPD1-202ENST00000526280 TMEM178AQ8NBL3 297 aa11.91□□□□□ -0.5
SMPD1-202ENST00000526280 OR56A1Q8NGH5 318 aa11.91□□□□□ -0.5
SMPD1-202ENST00000526280 C10orf82Q8WW14 230 aa11.91□□□□□ -0.5
SMPD1-202ENST00000526280 MOAP1Q96BY2 351 aa11.91□□□□□ -0.5
SMPD1-202ENST00000526280 SH2D2AQ9NP31 389 aa11.91□□□□□ -0.5
SMPD1-202ENST00000526280 TIMMDC1Q9NPL8 285 aa11.91□□□□□ -0.5
SMPD1-202ENST00000526280 EQTNQ9NQ60 294 aa11.91□□□□□ -0.5
SMPD1-202ENST00000526280 KLHL1Q9NR64 748 aa11.91□□□□□ -0.5
SMPD1-202ENST00000526280 CCDC167Q9P0B6 97 aa11.91□□□□□ -0.5
SMPD1-202ENST00000526280 MAP10Q9P2G4 905 aa11.91□□□□□ -0.5
SMPD1-202ENST00000526280 PRRC2CQ9Y520 2896 aaKnown RBP11.91□□□□□ -0.5
SMPD1-202ENST00000526280 TTLL8A6PVC2 850 aa11.9□□□□□ -0.5
SMPD1-202ENST00000526280 PPM1BO75688 479 aa11.9□□□□□ -0.5
SMPD1-202ENST00000526280 HMGN2P05204 90 aaKnown RBP11.9□□□□□ -0.5
SMPD1-202ENST00000526280 UQCRC2P22695 453 aa11.9□□□□□ -0.5
SMPD1-202ENST00000526280 SOAT1P35610 550 aa11.9□□□□□ -0.5
SMPD1-202ENST00000526280 PRIM2P49643 509 aa11.9□□□□□ -0.5
SMPD1-202ENST00000526280 TMED10P49755 219 aaKnown RBP11.9□□□□□ -0.5
SMPD1-202ENST00000526280 FBXW4P57775 412 aa11.9□□□□□ -0.5
SMPD1-202ENST00000526280 GAB1Q13480 694 aa11.9□□□□□ -0.5
SMPD1-202ENST00000526280 TP53BP2Q13625 1128 aa11.9□□□□□ -0.5
SMPD1-202ENST00000526280 RCAN2Q14206 197 aa11.9□□□□□ -0.5
SMPD1-202ENST00000526280 ZNHIT3Q15649 155 aaPredicted RBP11.9□□□□□ -0.5
SMPD1-202ENST00000526280 VPS26BQ4G0F5 336 aa11.9□□□□□ -0.5
SMPD1-202ENST00000526280 CYP27C1Q4G0S4 372 aa11.9□□□□□ -0.5
SMPD1-202ENST00000526280 TIGD2Q4W5G0 525 aa11.9□□□□□ -0.5
SMPD1-202ENST00000526280 AGKQ53H12 422 aa11.9□□□□□ -0.5
SMPD1-202ENST00000526280 BHLHB9Q6PI77 547 aa11.9□□□□□ -0.5
SMPD1-202ENST00000526280 TRPM8Q7Z2W7 1104 aa11.9□□□□□ -0.5
SMPD1-202ENST00000526280 GALNTL5Q7Z4T8 443 aa11.9□□□□□ -0.5
SMPD1-202ENST00000526280 CPSF7Q8N684 471 aaKnown RBP11.9□□□□□ -0.5
SMPD1-202ENST00000526280 SLC16A11Q8NCK7 471 aa11.9□□□□□ -0.5
SMPD1-202ENST00000526280 PSD4Q8NDX1 1056 aa11.9□□□□□ -0.5
SMPD1-202ENST00000526280 OR10G3Q8NGC4 313 aa11.9□□□□□ -0.5
SMPD1-202ENST00000526280 OR4N2Q8NGD1 307 aa11.9□□□□□ -0.5
SMPD1-202ENST00000526280 OR5AK3PQ8NH89 298 aa11.9□□□□□ -0.5
SMPD1-202ENST00000526280 TMBIM1Q969X1 311 aa11.9□□□□□ -0.5
SMPD1-202ENST00000526280 VPS33AQ96AX1 596 aa11.9□□□□□ -0.5
SMPD1-202ENST00000526280 OMA1Q96E52 524 aa11.9□□□□□ -0.5
SMPD1-202ENST00000526280 C16orf58Q96GQ5 468 aa11.9□□□□□ -0.5
SMPD1-202ENST00000526280 INPP5KQ9BT40 448 aa11.9□□□□□ -0.5
SMPD1-202ENST00000526280 RASSF4Q9H2L5 321 aa11.9□□□□□ -0.5
SMPD1-202ENST00000526280 SLC52A3Q9NQ40 469 aa11.9□□□□□ -0.5
SMPD1-202ENST00000526280 SERHLQ9NQF3 203 aa11.9□□□□□ -0.5
SMPD1-202ENST00000526280 GPATCH2Q9NW75 528 aa11.9□□□□□ -0.5
SMPD1-202ENST00000526280 CHCHD2Q9Y6H1 151 aaPredicted RBP11.9□□□□□ -0.5
SMPD1-202ENST00000526280 EML6Q6ZMW3 1958 aa11.9□□□□□ -0.51
SMPD1-202ENST00000526280 ZNF462Q96JM2 2506 aa11.89□□□□□ -0.51
SMPD1-202ENST00000526280 RNF103-CHMP3A0A140T963 221 aa11.89□□□□□ -0.51
SMPD1-202ENST00000526280 NKX2-2O95096 273 aa11.89□□□□□ -0.51
SMPD1-202ENST00000526280 ACP2P11117 423 aa11.89□□□□□ -0.51
SMPD1-202ENST00000526280 CD1EP15812 388 aa11.89□□□□□ -0.51
SMPD1-202ENST00000526280 GABRA3P34903 492 aa11.89□□□□□ -0.51
SMPD1-202ENST00000526280 CDKN2CP42773 168 aa11.89□□□□□ -0.51
SMPD1-202ENST00000526280 KCNK10P57789 538 aa11.89□□□□□ -0.51
SMPD1-202ENST00000526280 PLCXD2Q0VAA5 305 aa11.89□□□□□ -0.51
SMPD1-202ENST00000526280 LASP1Q14847 261 aaKnown RBP11.89□□□□□ -0.51
SMPD1-202ENST00000526280 INAQ16352 499 aa11.89□□□□□ -0.51
SMPD1-202ENST00000526280 SLC22A10Q63ZE4 541 aa11.89□□□□□ -0.51
SMPD1-202ENST00000526280 NUP54Q7Z3B4 507 aa11.89□□□□□ -0.51
SMPD1-202ENST00000526280 C6orf120Q7Z4R8 191 aa11.89□□□□□ -0.51
SMPD1-202ENST00000526280 SULF2Q8IWU5 870 aa11.89□□□□□ -0.51
SMPD1-202ENST00000526280 CLEC4FQ8N1N0 589 aa11.89□□□□□ -0.51
SMPD1-202ENST00000526280 CISD2Q8N5K1 135 aaKnown RBP11.89□□□□□ -0.51
SMPD1-202ENST00000526280 FAM13CQ8NE31 585 aa11.89□□□□□ -0.51
SMPD1-202ENST00000526280 OR5M3Q8NGP4 307 aa11.89□□□□□ -0.51
SMPD1-202ENST00000526280 PAQR8Q8TEZ7 354 aa11.89□□□□□ -0.51
SMPD1-202ENST00000526280 SLC9A6Q92581 669 aa11.89□□□□□ -0.51
SMPD1-202ENST00000526280 SNRNP40Q96DI7 357 aaKnown RBP11.89□□□□□ -0.51
SMPD1-202ENST00000526280 SPDL1Q96EA4 605 aa11.89□□□□□ -0.51
SMPD1-202ENST00000526280 ITCHQ96J02 903 aa11.89□□□□□ -0.51
SMPD1-202ENST00000526280 PANX1Q96RD7 426 aa11.89□□□□□ -0.51
SMPD1-202ENST00000526280 YIPF4Q9BSR8 244 aa11.89□□□□□ -0.51
SMPD1-202ENST00000526280 ACTRT3Q9BYD9 372 aa11.89□□□□□ -0.51
SMPD1-202ENST00000526280 RMND5AQ9H871 391 aa11.89□□□□□ -0.51
SMPD1-202ENST00000526280 Q9N2J8 555 aa11.89□□□□□ -0.51
SMPD1-202ENST00000526280 GIN1Q9NXP7 522 aa11.89□□□□□ -0.51
SMPD1-202ENST00000526280 CNIH4Q9P003 139 aa11.89□□□□□ -0.51
SMPD1-202ENST00000526280 CBLCQ9ULV8 474 aa11.89□□□□□ -0.51
SMPD1-202ENST00000526280 KLF13Q9Y2Y9 288 aaPredicted RBP11.89□□□□□ -0.51
SMPD1-202ENST00000526280 OR10H1Q9Y4A9 318 aa11.89□□□□□ -0.51
SMPD1-202ENST00000526280 CAPN7Q9Y6W3 813 aa11.89□□□□□ -0.51
SMPD1-202ENST00000526280 SPENQ96T58 3664 aaKnown RBP11.89□□□□□ -0.51
SMPD1-202ENST00000526280 GXYLT2A0PJZ3 443 aa11.88□□□□□ -0.51
SMPD1-202ENST00000526280 ASPDHA6ND91 283 aa11.88□□□□□ -0.51
SMPD1-202ENST00000526280 CCDC154A6NI56 674 aa11.88□□□□□ -0.51
SMPD1-202ENST00000526280 OR6C70A6NIJ9 312 aa11.88□□□□□ -0.51
SMPD1-202ENST00000526280 KLRC4-KLRK1H3BQV0 150 aa11.88□□□□□ -0.51
SMPD1-202ENST00000526280 RFXANKO14593 260 aa11.88□□□□□ -0.51
SMPD1-202ENST00000526280 TP53I11O14683 189 aa11.88□□□□□ -0.51
SMPD1-202ENST00000526280 PEX1O43933 1283 aa11.88□□□□□ -0.51
SMPD1-202ENST00000526280 TSPAN2O60636 221 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms