RNA–Protein interactions for RNA: ENST00000525852.3

CTTN-210, Transcript of cortactin, humanhuman

TSL 5

Gene CTTN, Length 1,470 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-210ENST00000525852 TMBIM1Q969X1 311 aa11.32□□□□□ -0.6
CTTN-210ENST00000525852 C16orf58Q96GQ5 468 aa11.32□□□□□ -0.6
CTTN-210ENST00000525852 C3orf14Q9HBI5 128 aa11.32□□□□□ -0.6
CTTN-210ENST00000525852 SACM1LQ9NTJ5 587 aa11.32□□□□□ -0.6
CTTN-210ENST00000525852 RYDENQ9NUL5 291 aaKnown RBP11.32□□□□□ -0.6
CTTN-210ENST00000525852 CNOT11Q9UKZ1 510 aaKnown RBP11.32□□□□□ -0.6
CTTN-210ENST00000525852 FREM3P0C091 2139 aa11.32□□□□□ -0.6
CTTN-210ENST00000525852 CAPN14A8MX76 684 aa11.32□□□□□ -0.6
CTTN-210ENST00000525852 RNASET2O00584 256 aaKnown RBP11.32□□□□□ -0.6
CTTN-210ENST00000525852 POLR3GO15318 223 aaPredicted RBP11.32□□□□□ -0.6
CTTN-210ENST00000525852 CFLARO15519 480 aa11.32□□□□□ -0.6
CTTN-210ENST00000525852 UGT2B11O75310 529 aa11.32□□□□□ -0.6
CTTN-210ENST00000525852 CBX6O95503 412 aa11.32□□□□□ -0.6
CTTN-210ENST00000525852 NAGAP17050 411 aa11.32□□□□□ -0.6
CTTN-210ENST00000525852 CNR1P21554 472 aa11.32□□□□□ -0.6
CTTN-210ENST00000525852 S100A3P33764 101 aa11.32□□□□□ -0.6
CTTN-210ENST00000525852 MAP3K8P41279 467 aa11.32□□□□□ -0.6
CTTN-210ENST00000525852 ZFP36L2P47974 494 aaKnown RBP11.32□□□□□ -0.6
CTTN-210ENST00000525852 DNASE1L1P49184 302 aa11.32□□□□□ -0.6
CTTN-210ENST00000525852 CCT3P49368 545 aaKnown RBP11.32□□□□□ -0.6
CTTN-210ENST00000525852 TMED10P49755 219 aaKnown RBP11.32□□□□□ -0.6
CTTN-210ENST00000525852 GAB1Q13480 694 aa11.32□□□□□ -0.6
CTTN-210ENST00000525852 GSTA3Q16772 222 aa11.32□□□□□ -0.6
CTTN-210ENST00000525852 DPY19L1Q2PZI1 675 aa11.32□□□□□ -0.6
CTTN-210ENST00000525852 ZFP62Q8NB50 900 aaPredicted RBP11.32□□□□□ -0.6
CTTN-210ENST00000525852 FAM98AQ8NCA5 519 aaKnown RBP11.32□□□□□ -0.6
CTTN-210ENST00000525852 GALNT11Q8NCW6 608 aa11.32□□□□□ -0.6
CTTN-210ENST00000525852 FBXO30Q8TB52 745 aa11.32□□□□□ -0.6
CTTN-210ENST00000525852 SPPL2AQ8TCT8 520 aa11.32□□□□□ -0.6
CTTN-210ENST00000525852 HOXB13Q92826 284 aaPredicted RBP11.32□□□□□ -0.6
CTTN-210ENST00000525852 HGDQ93099 445 aa11.32□□□□□ -0.6
CTTN-210ENST00000525852 MS4A4EQ96PG1 132 aa11.32□□□□□ -0.6
CTTN-210ENST00000525852 LMF2Q9BU23 707 aaKnown RBP11.32□□□□□ -0.6
CTTN-210ENST00000525852 CCDC28BQ9BUN5 200 aa11.32□□□□□ -0.6
CTTN-210ENST00000525852 NPHS2Q9NP85 383 aa11.32□□□□□ -0.6
CTTN-210ENST00000525852 SDR39U1Q9NRG7 319 aaPredicted RBP11.32□□□□□ -0.6
CTTN-210ENST00000525852 ZCCHC3Q9NUD5 404 aaKnown RBP11.32□□□□□ -0.6
CTTN-210ENST00000525852 DCTN4Q9UJW0 460 aa11.32□□□□□ -0.6
CTTN-210ENST00000525852 OR10H1Q9Y4A9 318 aa11.32□□□□□ -0.6
CTTN-210ENST00000525852 PRSS51A0A1B0GVH4 220 aa11.31□□□□□ -0.6
CTTN-210ENST00000525852 GXYLT2A0PJZ3 443 aa11.31□□□□□ -0.6
CTTN-210ENST00000525852 TP53I11O14683 189 aa11.31□□□□□ -0.6
CTTN-210ENST00000525852 TSPAN2O60636 221 aa11.31□□□□□ -0.6
CTTN-210ENST00000525852 REM1O75628 298 aa11.31□□□□□ -0.6
CTTN-210ENST00000525852 SLC22A3O75751 556 aa11.31□□□□□ -0.6
CTTN-210ENST00000525852 ACP2P11117 423 aa11.31□□□□□ -0.6
CTTN-210ENST00000525852 GABRA3P34903 492 aa11.31□□□□□ -0.6
CTTN-210ENST00000525852 MDH1P40925 334 aaKnown RBP11.31□□□□□ -0.6
CTTN-210ENST00000525852 PRR5P85299 388 aa11.31□□□□□ -0.6
CTTN-210ENST00000525852 ALDH6A1Q02252 535 aaKnown RBP11.31□□□□□ -0.6
CTTN-210ENST00000525852 FOXO1Q12778 655 aa11.31□□□□□ -0.6
CTTN-210ENST00000525852 GTF3C1Q12789 2109 aa11.31□□□□□ -0.6
CTTN-210ENST00000525852 ZNHIT3Q15649 155 aaPredicted RBP11.31□□□□□ -0.6
CTTN-210ENST00000525852 EXOSC6Q5RKV6 272 aaKnown RBP11.31□□□□□ -0.6
CTTN-210ENST00000525852 ANXA8L1Q5VT79 327 aa11.31□□□□□ -0.6
CTTN-210ENST00000525852 MFSD12Q6NUT3 480 aa11.31□□□□□ -0.6
CTTN-210ENST00000525852 PAOXQ6QHF9 649 aa11.31□□□□□ -0.6
CTTN-210ENST00000525852 ATCAYQ86WG3 371 aa11.31□□□□□ -0.6
CTTN-210ENST00000525852 SIAH3Q8IW03 269 aa11.31□□□□□ -0.6
CTTN-210ENST00000525852 CLEC4FQ8N1N0 589 aa11.31□□□□□ -0.6
CTTN-210ENST00000525852 POGLUT1Q8NBL1 392 aa11.31□□□□□ -0.6
CTTN-210ENST00000525852 SLC16A11Q8NCK7 471 aa11.31□□□□□ -0.6
CTTN-210ENST00000525852 OR4A15Q8NGL6 344 aa11.31□□□□□ -0.6
CTTN-210ENST00000525852 OR9I1Q8NGQ6 314 aa11.31□□□□□ -0.6
CTTN-210ENST00000525852 OR5AK3PQ8NH89 298 aa11.31□□□□□ -0.6
CTTN-210ENST00000525852 DIO2Q92813 273 aa11.31□□□□□ -0.6
CTTN-210ENST00000525852 EFHD2Q96C19 240 aaPredicted RBP11.31□□□□□ -0.6
CTTN-210ENST00000525852 OTUB1Q96FW1 271 aaPredicted RBP11.31□□□□□ -0.6
CTTN-210ENST00000525852 COL21A1Q96P44 957 aa11.31□□□□□ -0.6
CTTN-210ENST00000525852 NODALQ96S42 347 aa11.31□□□□□ -0.6
CTTN-210ENST00000525852 ADOQ96SZ5 270 aa11.31□□□□□ -0.6
CTTN-210ENST00000525852 ZBTB18Q99592 522 aa11.31□□□□□ -0.6
CTTN-210ENST00000525852 FAM173AQ9BQD7 235 aa11.31□□□□□ -0.6
CTTN-210ENST00000525852 YIPF4Q9BSR8 244 aa11.31□□□□□ -0.6
CTTN-210ENST00000525852 CCDC134Q9H6E4 229 aa11.31□□□□□ -0.6
CTTN-210ENST00000525852 NEUROD4Q9HD90 331 aa11.31□□□□□ -0.6
CTTN-210ENST00000525852 FGFR1OP2Q9NVK5 253 aa11.31□□□□□ -0.6
CTTN-210ENST00000525852 GPATCH2Q9NW75 528 aa11.31□□□□□ -0.6
CTTN-210ENST00000525852 TUBA8Q9NY65 449 aaPredicted RBP11.31□□□□□ -0.6
CTTN-210ENST00000525852 ZIM2Q9NZV7 527 aa11.31□□□□□ -0.6
CTTN-210ENST00000525852 CNIH4Q9P003 139 aa11.31□□□□□ -0.6
CTTN-210ENST00000525852 VPS4AQ9UN37 437 aa11.31□□□□□ -0.6
CTTN-210ENST00000525852 DIDO1Q9BTC0 2240 aaKnown RBP11.3□□□□□ -0.6
CTTN-210ENST00000525852 ANKUB1A6NFN9 424 aa11.3□□□□□ -0.6
CTTN-210ENST00000525852 OR6C70A6NIJ9 312 aa11.3□□□□□ -0.6
CTTN-210ENST00000525852 NPIPA5E9PKD4 350 aa11.3□□□□□ -0.6
CTTN-210ENST00000525852 ZNHIT1O43257 154 aa11.3□□□□□ -0.6
CTTN-210ENST00000525852 GLSO94925 669 aaPredicted RBP11.3□□□□□ -0.6
CTTN-210ENST00000525852 NKX2-2O95096 273 aa11.3□□□□□ -0.6
CTTN-210ENST00000525852 CPSF4O95639 269 aaKnown RBP11.3□□□□□ -0.6
CTTN-210ENST00000525852 HMGN2P05204 90 aaKnown RBP11.3□□□□□ -0.6
CTTN-210ENST00000525852 PGRP06401 933 aa11.3□□□□□ -0.6
CTTN-210ENST00000525852 EDN3P14138 238 aa11.3□□□□□ -0.6
CTTN-210ENST00000525852 ZNF24P17028 368 aa11.3□□□□□ -0.6
CTTN-210ENST00000525852 CASP3P42574 277 aa11.3□□□□□ -0.6
CTTN-210ENST00000525852 KCNK10P57789 538 aa11.3□□□□□ -0.6
CTTN-210ENST00000525852 TP53BP2Q13625 1128 aa11.3□□□□□ -0.6
CTTN-210ENST00000525852 EIF2S3LQ2VIR3 472 aaKnown RBP11.3□□□□□ -0.6
CTTN-210ENST00000525852 SPDYE7PQ495Y7 208 aa11.3□□□□□ -0.6
CTTN-210ENST00000525852 CYP27C1Q4G0S4 372 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms