RNA–Protein interactions for RNA: ENST00000525688.5

CD44-220, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 560 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-220ENST00000525688 GOLGA8TH3BQL2 631 aa4.31□□□□□ -1.72
CD44-220ENST00000525688 ZNF197O14709 1029 aa4.31□□□□□ -1.72
CD44-220ENST00000525688 LSM1O15116 133 aaKnown RBP4.31□□□□□ -1.72
CD44-220ENST00000525688 FLRT2O43155 660 aa4.31□□□□□ -1.72
CD44-220ENST00000525688 AP5Z1O43299 807 aa4.31□□□□□ -1.72
CD44-220ENST00000525688 RNASEH1O60930 286 aaKnown RBP4.31□□□□□ -1.72
CD44-220ENST00000525688 DFFBO76075 338 aa4.31□□□□□ -1.72
CD44-220ENST00000525688 OR4F21O95013 312 aa4.31□□□□□ -1.72
CD44-220ENST00000525688 STBD1O95210 358 aa4.31□□□□□ -1.72
CD44-220ENST00000525688 PPP1R3DO95685 299 aa4.31□□□□□ -1.72
CD44-220ENST00000525688 SNAI1O95863 264 aaPredicted RBP4.31□□□□□ -1.72
CD44-220ENST00000525688 ALPLP05186 524 aa4.31□□□□□ -1.72
CD44-220ENST00000525688 NGFRP08138 427 aa4.31□□□□□ -1.72
CD44-220ENST00000525688 ELAVL4P26378 380 aaKnown RBP4.31□□□□□ -1.72
CD44-220ENST00000525688 NMT1P30419 496 aaKnown RBP4.31□□□□□ -1.72
CD44-220ENST00000525688 CDKN2AP42771 156 aaKnown RBP4.31□□□□□ -1.72
CD44-220ENST00000525688 GPR4P46093 362 aa4.31□□□□□ -1.72
CD44-220ENST00000525688 FMO5P49326 533 aa4.31□□□□□ -1.72
CD44-220ENST00000525688 DSCR9P59020 149 aa4.31□□□□□ -1.72
CD44-220ENST00000525688 SSTP61278 116 aa4.31□□□□□ -1.72
CD44-220ENST00000525688 RPL24P83731 157 aaKnown RBP4.31□□□□□ -1.72
CD44-220ENST00000525688 DR1Q01658 176 aa4.31□□□□□ -1.72
CD44-220ENST00000525688 EEF1A2Q05639 463 aaKnown RBP4.31□□□□□ -1.72
CD44-220ENST00000525688 FUT7Q11130 342 aa4.31□□□□□ -1.72
CD44-220ENST00000525688 GAGE5Q13069 117 aa4.31□□□□□ -1.72
CD44-220ENST00000525688 GAGE6Q13070 117 aa4.31□□□□□ -1.72
CD44-220ENST00000525688 SLAQ13239 276 aa4.31□□□□□ -1.72
CD44-220ENST00000525688 RFTN1Q14699 578 aaPredicted RBP4.31□□□□□ -1.72
CD44-220ENST00000525688 HERC3Q15034 1050 aa4.31□□□□□ -1.72
CD44-220ENST00000525688 STK38Q15208 465 aa4.31□□□□□ -1.72
CD44-220ENST00000525688 BCL2A1Q16548 175 aa4.31□□□□□ -1.72
CD44-220ENST00000525688 EXOC3L2Q2M3D2 409 aa4.31□□□□□ -1.72
CD44-220ENST00000525688 PARP6Q2NL67 630 aa4.31□□□□□ -1.72
CD44-220ENST00000525688 SYT14P1Q58G82 188 aa4.31□□□□□ -1.72
CD44-220ENST00000525688 PTRHD1Q6GMV3 140 aaKnown RBP4.31□□□□□ -1.72
CD44-220ENST00000525688 PRSS55Q6UWB4 352 aaPredicted RBP4.31□□□□□ -1.72
CD44-220ENST00000525688 ZNF517Q6ZMY9 492 aaPredicted RBP4.31□□□□□ -1.72
CD44-220ENST00000525688 TRMT10CQ7L0Y3 403 aaKnown RBP4.31□□□□□ -1.72
CD44-220ENST00000525688 TRPM8Q7Z2W7 1104 aa4.31□□□□□ -1.72
CD44-220ENST00000525688 ERASQ7Z444 233 aa4.31□□□□□ -1.72
CD44-220ENST00000525688 LONP2Q86WA8 852 aa4.31□□□□□ -1.72
CD44-220ENST00000525688 PAQR7Q86WK9 346 aa4.31□□□□□ -1.72
CD44-220ENST00000525688 LAX1Q8IWV1 398 aa4.31□□□□□ -1.72
CD44-220ENST00000525688 GCNT2Q8N0V5 402 aa4.31□□□□□ -1.72
CD44-220ENST00000525688 GPC2Q8N158 579 aa4.31□□□□□ -1.72
CD44-220ENST00000525688 TRPV3Q8NET8 790 aa4.31□□□□□ -1.72
CD44-220ENST00000525688 ANGPTL6Q8NI99 470 aa4.31□□□□□ -1.72
CD44-220ENST00000525688 SCARB1Q8WTV0 552 aa4.31□□□□□ -1.72
CD44-220ENST00000525688 GLYATL2Q8WU03 294 aa4.31□□□□□ -1.72
CD44-220ENST00000525688 U2AF1L4Q8WU68 220 aaKnown RBP4.31□□□□□ -1.72
CD44-220ENST00000525688 FRAT1Q92837 279 aaPredicted RBP4.31□□□□□ -1.72
CD44-220ENST00000525688 OSTF1Q92882 214 aa4.31□□□□□ -1.72
CD44-220ENST00000525688 EMG1Q92979 244 aaKnown RBP4.31□□□□□ -1.72
CD44-220ENST00000525688 SLC47A1Q96FL8 570 aa4.31□□□□□ -1.72
CD44-220ENST00000525688 LRR1Q96L50 414 aa4.31□□□□□ -1.72
CD44-220ENST00000525688 PANX1Q96RD7 426 aa4.31□□□□□ -1.72
CD44-220ENST00000525688 TMEM43Q9BTV4 400 aa4.31□□□□□ -1.72
CD44-220ENST00000525688 ADNPQ9H2P0 1102 aa4.31□□□□□ -1.72
CD44-220ENST00000525688 BICC1Q9H694 974 aaKnown RBP4.31□□□□□ -1.72
CD44-220ENST00000525688 TMEM185BQ9H7F4 350 aa4.31□□□□□ -1.72
CD44-220ENST00000525688 MEAF6Q9HAF1 191 aa4.31□□□□□ -1.72
CD44-220ENST00000525688 CHRAC1Q9NRG0 131 aa4.31□□□□□ -1.72
CD44-220ENST00000525688 RDH8Q9NYR8 311 aa4.31□□□□□ -1.72
CD44-220ENST00000525688 B3GAT1Q9P2W7 334 aa4.31□□□□□ -1.72
CD44-220ENST00000525688 ERVK-18Q9QC07 812 aa4.31□□□□□ -1.72
CD44-220ENST00000525688 CTSFQ9UBX1 484 aa4.31□□□□□ -1.72
CD44-220ENST00000525688 RNF150Q9ULK6 438 aa4.31□□□□□ -1.72
CD44-220ENST00000525688 TNNQ9UQP3 1299 aa4.31□□□□□ -1.72
CD44-220ENST00000525688 ZNF510Q9Y2H8 683 aa4.31□□□□□ -1.72
CD44-220ENST00000525688 BZW2Q9Y6E2 419 aaKnown RBP4.31□□□□□ -1.72
CD44-220ENST00000525688 SLCO1B1Q9Y6L6 691 aa4.31□□□□□ -1.72
CD44-220ENST00000525688 WDR90Q96KV7 1748 aa4.31□□□□□ -1.72
CD44-220ENST00000525688 MED23Q9ULK4 1368 aa4.3□□□□□ -1.72
CD44-220ENST00000525688 TRAV25A0A0B4J276 109 aa4.3□□□□□ -1.72
CD44-220ENST00000525688 ADAM12O43184 909 aa4.3□□□□□ -1.72
CD44-220ENST00000525688 GRID2O43424 1007 aa4.3□□□□□ -1.72
CD44-220ENST00000525688 RNF13O43567 381 aa4.3□□□□□ -1.72
CD44-220ENST00000525688 CHMP2AO43633 222 aa4.3□□□□□ -1.72
CD44-220ENST00000525688 SYNGR3O43761 229 aa4.3□□□□□ -1.72
CD44-220ENST00000525688 CLN5O75503 358 aa4.3□□□□□ -1.72
CD44-220ENST00000525688 UFL1O94874 794 aa4.3□□□□□ -1.72
CD44-220ENST00000525688 PIGNO95427 931 aa4.3□□□□□ -1.72
CD44-220ENST00000525688 ZBTB11O95625 1053 aaPredicted RBP4.3□□□□□ -1.72
CD44-220ENST00000525688 GAS8O95995 478 aa4.3□□□□□ -1.72
CD44-220ENST00000525688 RPSAP08865 295 aaKnown RBP4.3□□□□□ -1.72
CD44-220ENST00000525688 UBTFL1P0CB47 393 aaPredicted RBP4.3□□□□□ -1.72
CD44-220ENST00000525688 RRASP10301 218 aa4.3□□□□□ -1.72
CD44-220ENST00000525688 ZNF44P15621 663 aa4.3□□□□□ -1.72
CD44-220ENST00000525688 HNF1AP20823 631 aa4.3□□□□□ -1.72
CD44-220ENST00000525688 CBLP22681 906 aa4.3□□□□□ -1.72
CD44-220ENST00000525688 EVI2BP34910 448 aa4.3□□□□□ -1.72
CD44-220ENST00000525688 OR1D2P34982 312 aa4.3□□□□□ -1.72
CD44-220ENST00000525688 PTGER4P35408 488 aa4.3□□□□□ -1.72
CD44-220ENST00000525688 SPAM1P38567 509 aa4.3□□□□□ -1.72
CD44-220ENST00000525688 NSFP46459 744 aaKnown RBP4.3□□□□□ -1.72
CD44-220ENST00000525688 MAPK12P53778 367 aa4.3□□□□□ -1.72
CD44-220ENST00000525688 ATP12AP54707 1039 aa4.3□□□□□ -1.72
CD44-220ENST00000525688 MFAP5Q13361 173 aa4.3□□□□□ -1.72
CD44-220ENST00000525688 CUL3Q13618 768 aa4.3□□□□□ -1.72
CD44-220ENST00000525688 SELPLGQ14242 412 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms