RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 ENO4A6NNW6 628 aa16.94■□□□□ 0.3
CAPN1-203ENST00000525013 FAM47E-STBD1D6RA91 191 aa16.94■□□□□ 0.3
CAPN1-203ENST00000525013 ABCB7O75027 752 aa16.94■□□□□ 0.3
CAPN1-203ENST00000525013 CHEK2O96017 543 aa16.94■□□□□ 0.3
CAPN1-203ENST00000525013 PTPN6P29350 595 aa16.94■□□□□ 0.3
CAPN1-203ENST00000525013 IL12BP29460 328 aa16.94■□□□□ 0.3
CAPN1-203ENST00000525013 ALDH3A1P30838 453 aa16.94■□□□□ 0.3
CAPN1-203ENST00000525013 SSTR2P30874 369 aa16.94■□□□□ 0.3
CAPN1-203ENST00000525013 MC3RP41968 323 aa16.94■□□□□ 0.3
CAPN1-203ENST00000525013 CRYZQ08257 329 aaKnown RBP16.94■□□□□ 0.3
CAPN1-203ENST00000525013 WIPI1Q5MNZ9 446 aaPredicted RBP16.94■□□□□ 0.3
CAPN1-203ENST00000525013 SH2D4BQ5SQS7 431 aa16.94■□□□□ 0.3
CAPN1-203ENST00000525013 TMEM81Q6P7N7 255 aa16.94■□□□□ 0.3
CAPN1-203ENST00000525013 EMBQ6PCB8 327 aa16.94■□□□□ 0.3
CAPN1-203ENST00000525013 TMEM107Q6UX40 140 aa16.94■□□□□ 0.3
CAPN1-203ENST00000525013 NPSR1Q6W5P4 371 aa16.94■□□□□ 0.3
CAPN1-203ENST00000525013 IKBIPQ70UQ0 350 aa16.94■□□□□ 0.3
CAPN1-203ENST00000525013 LARP4Q71RC2 724 aaKnown RBP eCLIP16.94■□□□□ 0.3
CAPN1-203ENST00000525013 YRDCQ86U90 279 aaKnown RBP16.94■□□□□ 0.3
CAPN1-203ENST00000525013 AENQ8WTP8 325 aaKnown RBP16.94■□□□□ 0.3
CAPN1-203ENST00000525013 GFM2Q969S9 779 aaKnown RBP16.94■□□□□ 0.3
CAPN1-203ENST00000525013 METTL2AQ96IZ6 378 aaKnown RBP16.94■□□□□ 0.3
CAPN1-203ENST00000525013 EGLN2Q96KS0 407 aa16.94■□□□□ 0.3
CAPN1-203ENST00000525013 NPDC1Q9NQX5 325 aaPredicted RBP16.94■□□□□ 0.3
CAPN1-203ENST00000525013 MKS1Q9NXB0 559 aa16.94■□□□□ 0.3
CAPN1-203ENST00000525013 SLC17A7Q9P2U7 560 aa16.94■□□□□ 0.3
CAPN1-203ENST00000525013 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.94■□□□□ 0.3
CAPN1-203ENST00000525013 LGALS13Q9UHV8 139 aa16.94■□□□□ 0.3
CAPN1-203ENST00000525013 CAMK2AQ9UQM7 478 aa16.94■□□□□ 0.3
CAPN1-203ENST00000525013 CCL27Q9Y4X3 112 aa16.94■□□□□ 0.3
CAPN1-203ENST00000525013 PCDHGB3Q9Y5G1 929 aa16.94■□□□□ 0.3
CAPN1-203ENST00000525013 V9GYY5 206 aaPredicted RBP16.94■□□□□ 0.3
CAPN1-203ENST00000525013 PDZD2O15018 2839 aa16.93■□□□□ 0.3
CAPN1-203ENST00000525013 ANKRD17O75179 2603 aaKnown RBP16.93■□□□□ 0.3
CAPN1-203ENST00000525013 SNPHO15079 494 aa16.93■□□□□ 0.3
CAPN1-203ENST00000525013 COQ9O75208 318 aa16.93■□□□□ 0.3
CAPN1-203ENST00000525013 SLU7O95391 586 aaKnown RBP16.93■□□□□ 0.3
CAPN1-203ENST00000525013 LINC00032P0C843 101 aa16.93■□□□□ 0.3
CAPN1-203ENST00000525013 TACR1P25103 407 aa16.93■□□□□ 0.3
CAPN1-203ENST00000525013 PTGDSP41222 190 aa16.93■□□□□ 0.3
CAPN1-203ENST00000525013 PSPHP78330 225 aa16.93■□□□□ 0.3
CAPN1-203ENST00000525013 TFF3Q07654 80 aa16.93■□□□□ 0.3
CAPN1-203ENST00000525013 EFR3AQ14156 821 aa16.93■□□□□ 0.3
CAPN1-203ENST00000525013 DDIASQ8IXT1 998 aa16.93■□□□□ 0.3
CAPN1-203ENST00000525013 FAM83FQ8NEG4 500 aaPredicted RBP16.93■□□□□ 0.3
CAPN1-203ENST00000525013 OR4N2Q8NGD1 307 aa16.93■□□□□ 0.3
CAPN1-203ENST00000525013 EFHD2Q96C19 240 aaPredicted RBP16.93■□□□□ 0.3
CAPN1-203ENST00000525013 NTNG2Q96CW9 530 aa16.93■□□□□ 0.3
CAPN1-203ENST00000525013 SLC35A4Q96G79 324 aa16.93■□□□□ 0.3
CAPN1-203ENST00000525013 MECRQ9BV79 373 aa16.93■□□□□ 0.3
CAPN1-203ENST00000525013 ROPN1BQ9BZX4 212 aaPredicted RBP16.93■□□□□ 0.3
CAPN1-203ENST00000525013 GLIPR2Q9H4G4 154 aa16.93■□□□□ 0.3
CAPN1-203ENST00000525013 ROPN1Q9HAT0 212 aaPredicted RBP16.93■□□□□ 0.3
CAPN1-203ENST00000525013 EXO1Q9UQ84 846 aaKnown RBP16.93■□□□□ 0.3
CAPN1-203ENST00000525013 A0A087WV62 115 aa16.92■□□□□ 0.3
CAPN1-203ENST00000525013 AHRRA9YTQ3 701 aa16.92■□□□□ 0.3
CAPN1-203ENST00000525013 AKAP10O43572 662 aa16.92■□□□□ 0.3
CAPN1-203ENST00000525013 TSPAN2O60636 221 aa16.92■□□□□ 0.3
CAPN1-203ENST00000525013 SLITRK5O94991 958 aa16.92■□□□□ 0.3
CAPN1-203ENST00000525013 CHRNGP07510 517 aa16.92■□□□□ 0.3
CAPN1-203ENST00000525013 NEFHP12036 1026 aa16.92■□□□□ 0.3
CAPN1-203ENST00000525013 BMP7P18075 431 aa16.92■□□□□ 0.3
CAPN1-203ENST00000525013 PRPH2P23942 346 aa16.92■□□□□ 0.3
CAPN1-203ENST00000525013 MSX1P28360 303 aa16.92■□□□□ 0.3
CAPN1-203ENST00000525013 GCKP35557 465 aa16.92■□□□□ 0.3
CAPN1-203ENST00000525013 KIAA0040Q15053 153 aa16.92■□□□□ 0.3
CAPN1-203ENST00000525013 RIPPLY2Q5TAB7 128 aa16.92■□□□□ 0.3
CAPN1-203ENST00000525013 KANK2Q63ZY3 851 aa16.92■□□□□ 0.3
CAPN1-203ENST00000525013 VASNQ6EMK4 673 aa16.92■□□□□ 0.3
CAPN1-203ENST00000525013 Q6ZSR9 355 aa16.92■□□□□ 0.3
CAPN1-203ENST00000525013 WDR53Q7Z5U6 358 aaPredicted RBP16.92■□□□□ 0.3
CAPN1-203ENST00000525013 PM20D2Q8IYS1 436 aa16.92■□□□□ 0.3
CAPN1-203ENST00000525013 WDSUB1Q8N9V3 476 aa16.92■□□□□ 0.3
CAPN1-203ENST00000525013 ACBD4Q8NC06 268 aa16.92■□□□□ 0.3
CAPN1-203ENST00000525013 OR2T11Q8NH01 316 aa16.92■□□□□ 0.3
CAPN1-203ENST00000525013 TCP10LQ8TDR4 215 aa16.92■□□□□ 0.3
CAPN1-203ENST00000525013 ABTB1Q969K4 478 aaPredicted RBP16.92■□□□□ 0.3
CAPN1-203ENST00000525013 LURAP1Q96LR2 239 aa16.92■□□□□ 0.3
CAPN1-203ENST00000525013 DOCK7Q96N67 2140 aa16.92■□□□□ 0.3
CAPN1-203ENST00000525013 AMDHD1Q96NU7 426 aa16.92■□□□□ 0.3
CAPN1-203ENST00000525013 UGT2B28Q9BY64 529 aa16.92■□□□□ 0.3
CAPN1-203ENST00000525013 EML4Q9HC35 981 aaKnown RBP16.92■□□□□ 0.3
CAPN1-203ENST00000525013 DDX18Q9NVP1 670 aaKnown RBP16.92■□□□□ 0.3
CAPN1-203ENST00000525013 C19orf53Q9UNZ5 99 aaPredicted RBP16.92■□□□□ 0.3
CAPN1-203ENST00000525013 SPG11Q96JI7 2443 aa16.92■□□□□ 0.3
CAPN1-203ENST00000525013 TMEM233B4DJY2 109 aa16.91■□□□□ 0.3
CAPN1-203ENST00000525013 NPHS1O60500 1241 aa16.91■□□□□ 0.3
CAPN1-203ENST00000525013 CBR3O75828 277 aa16.91■□□□□ 0.3
CAPN1-203ENST00000525013 PNLIPRP2P54317 469 aa16.91■□□□□ 0.3
CAPN1-203ENST00000525013 WNT3P56703 355 aa16.91■□□□□ 0.3
CAPN1-203ENST00000525013 RPL38P63173 70 aaKnown RBP16.91■□□□□ 0.3
CAPN1-203ENST00000525013 MRPS22P82650 360 aaKnown RBP16.91■□□□□ 0.3
CAPN1-203ENST00000525013 TLE4Q04727 773 aa16.91■□□□□ 0.3
CAPN1-203ENST00000525013 SF3B4Q15427 424 aaKnown RBP eCLIP16.91■□□□□ 0.33e-8■■■■■ 31.2
CAPN1-203ENST00000525013 GALNTL6Q49A17 601 aa16.91■□□□□ 0.3
CAPN1-203ENST00000525013 ACSF3Q4G176 576 aaPredicted RBP16.91■□□□□ 0.3
CAPN1-203ENST00000525013 ARL13AQ5H913 290 aaPredicted RBP16.91■□□□□ 0.3
CAPN1-203ENST00000525013 ANKRD26P1Q6NSI1 321 aa16.91■□□□□ 0.3
CAPN1-203ENST00000525013 LIX1LQ8IVB5 337 aa16.91■□□□□ 0.3
CAPN1-203ENST00000525013 OR14L1PQ8NHC6 308 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms