RNA–Protein interactions for RNA: ENST00000523896.1

PCM1-220, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-220ENST00000523896 EFCAB5A4FU69 1503 aa2.95□□□□□ -1.94
PCM1-220ENST00000523896 CDK13Q14004 1512 aaKnown RBP2.95□□□□□ -1.94
PCM1-220ENST00000523896 ZFYVE16Q7Z3T8 1539 aa2.95□□□□□ -1.94
PCM1-220ENST00000523896 KDM5BQ9UGL1 1544 aa2.95□□□□□ -1.94
PCM1-220ENST00000523896 A0A087WWV3 80 aa2.95□□□□□ -1.94
PCM1-220ENST00000523896 KRT87PA6NCN2 255 aa2.95□□□□□ -1.94
PCM1-220ENST00000523896 ZNF840PA6NDX5 716 aa2.95□□□□□ -1.94
PCM1-220ENST00000523896 K7ERI5 159 aa2.95□□□□□ -1.94
PCM1-220ENST00000523896 PDLIM1O00151 329 aa2.95□□□□□ -1.94
PCM1-220ENST00000523896 EI24O14681 340 aa2.95□□□□□ -1.94
PCM1-220ENST00000523896 ADAM12O43184 909 aa2.95□□□□□ -1.94
PCM1-220ENST00000523896 PDE5AO76074 875 aa2.95□□□□□ -1.94
PCM1-220ENST00000523896 TGFAP01135 160 aa2.95□□□□□ -1.94
PCM1-220ENST00000523896 IGHV3-9P01782 118 aa2.95□□□□□ -1.94
PCM1-220ENST00000523896 PRDX6P30041 224 aa2.95□□□□□ -1.94
PCM1-220ENST00000523896 BRCC3P46736 316 aa2.95□□□□□ -1.94
PCM1-220ENST00000523896 RPL34P49207 117 aaKnown RBP2.95□□□□□ -1.94
PCM1-220ENST00000523896 NAAAQ02083 359 aa2.95□□□□□ -1.94
PCM1-220ENST00000523896 SMC1AQ14683 1233 aaKnown RBP2.95□□□□□ -1.94
PCM1-220ENST00000523896 ABRAXAS2Q15018 415 aa2.95□□□□□ -1.94
PCM1-220ENST00000523896 ZKSCAN8Q15776 578 aaPredicted RBP2.95□□□□□ -1.94
PCM1-220ENST00000523896 LRIT3Q3SXY7 679 aa2.95□□□□□ -1.94
PCM1-220ENST00000523896 SEL1L2Q5TEA6 688 aa2.95□□□□□ -1.94
PCM1-220ENST00000523896 RNLSQ5VYX0 342 aa2.95□□□□□ -1.94
PCM1-220ENST00000523896 SPINK14Q6IE38 97 aa2.95□□□□□ -1.94
PCM1-220ENST00000523896 ADAMTSL5Q6ZMM2 481 aa2.95□□□□□ -1.94
PCM1-220ENST00000523896 SERINC5Q86VE9 423 aa2.95□□□□□ -1.94
PCM1-220ENST00000523896 GPBP1Q86WP2 473 aa2.95□□□□□ -1.94
PCM1-220ENST00000523896 OR56B1Q8NGI3 324 aa2.95□□□□□ -1.94
PCM1-220ENST00000523896 AGAP11Q8TF27 550 aa2.95□□□□□ -1.94
PCM1-220ENST00000523896 CRYGNQ8WXF5 182 aa2.95□□□□□ -1.94
PCM1-220ENST00000523896 DLX4Q92988 240 aaPredicted RBP2.95□□□□□ -1.94
PCM1-220ENST00000523896 LHX4Q969G2 390 aa2.95□□□□□ -1.94
PCM1-220ENST00000523896 SAMD8Q96LT4 415 aa2.95□□□□□ -1.94
PCM1-220ENST00000523896 TSPAN18Q96SJ8 248 aa2.95□□□□□ -1.94
PCM1-220ENST00000523896 WRAP53Q9BUR4 548 aaKnown RBP2.95□□□□□ -1.94
PCM1-220ENST00000523896 APOOQ9BUR5 198 aa2.95□□□□□ -1.94
PCM1-220ENST00000523896 NMNAT2Q9BZQ4 307 aa2.95□□□□□ -1.94
PCM1-220ENST00000523896 TRIM9Q9C026 710 aa2.95□□□□□ -1.94
PCM1-220ENST00000523896 C1orf21Q9H246 121 aa2.95□□□□□ -1.94
PCM1-220ENST00000523896 PNNQ9H307 717 aaKnown RBP2.95□□□□□ -1.94
PCM1-220ENST00000523896 TSPY26PQ9H489 355 aa2.95□□□□□ -1.94
PCM1-220ENST00000523896 RNF41Q9H4P4 317 aaPredicted RBP2.95□□□□□ -1.94
PCM1-220ENST00000523896 ALG9Q9H6U8 611 aa2.95□□□□□ -1.94
PCM1-220ENST00000523896 CNOT2Q9NZN8 540 aaKnown RBP2.95□□□□□ -1.94
PCM1-220ENST00000523896 RAI14Q9P0K7 980 aa2.95□□□□□ -1.94
PCM1-220ENST00000523896 MBD2Q9UBB5 411 aa2.95□□□□□ -1.94
PCM1-220ENST00000523896 CLIP2Q9UDT6 1046 aa2.95□□□□□ -1.94
PCM1-220ENST00000523896 IL20RAQ9UHF4 553 aa2.95□□□□□ -1.94
PCM1-220ENST00000523896 TNIKQ9UKE5 1360 aa2.95□□□□□ -1.94
PCM1-220ENST00000523896 PLA2R1Q13018 1463 aa2.95□□□□□ -1.94
PCM1-220ENST00000523896 KDM5CP41229 1560 aa2.95□□□□□ -1.94
PCM1-220ENST00000523896 POLR1AO95602 1720 aaPredicted RBP2.94□□□□□ -1.94
PCM1-220ENST00000523896 LRIT2A6NDA9 550 aa2.94□□□□□ -1.94
PCM1-220ENST00000523896 LRRTM2O43300 516 aa2.94□□□□□ -1.94
PCM1-220ENST00000523896 RANBP6O60518 1105 aaKnown RBP2.94□□□□□ -1.94
PCM1-220ENST00000523896 ZNF253O75346 499 aa2.94□□□□□ -1.94
PCM1-220ENST00000523896 TOXO94900 526 aa2.94□□□□□ -1.94
PCM1-220ENST00000523896 NDUFA7O95182 113 aa2.94□□□□□ -1.94
PCM1-220ENST00000523896 ZCCHC18P0CG32 403 aa2.94□□□□□ -1.94
PCM1-220ENST00000523896 CYP11B1P15538 503 aa2.94□□□□□ -1.94
PCM1-220ENST00000523896 MAPK3P27361 379 aaPredicted RBP2.94□□□□□ -1.94
PCM1-220ENST00000523896 ASMTP46597 345 aa2.94□□□□□ -1.94
PCM1-220ENST00000523896 RABIFP47224 123 aa2.94□□□□□ -1.94
PCM1-220ENST00000523896 CSRP3P50461 194 aa2.94□□□□□ -1.94
PCM1-220ENST00000523896 ARHGDIAP52565 204 aa2.94□□□□□ -1.94
PCM1-220ENST00000523896 HAND2P61296 217 aa2.94□□□□□ -1.94
PCM1-220ENST00000523896 PDIA5Q14554 519 aa2.94□□□□□ -1.94
PCM1-220ENST00000523896 PARP6Q2NL67 630 aa2.94□□□□□ -1.94
PCM1-220ENST00000523896 CNPY1Q3B7I2 92 aa2.94□□□□□ -1.94
PCM1-220ENST00000523896 ZNF774Q6NX45 483 aa2.94□□□□□ -1.94
PCM1-220ENST00000523896 RBM43Q6ZSC3 357 aaKnown RBP2.94□□□□□ -1.94
PCM1-220ENST00000523896 PAQR9Q6ZVX9 377 aa2.94□□□□□ -1.94
PCM1-220ENST00000523896 SLC22A18ASQ8N1D0 253 aa2.94□□□□□ -1.94
PCM1-220ENST00000523896 MINDY2Q8NBR6 621 aa2.94□□□□□ -1.94
PCM1-220ENST00000523896 CNNM3Q8NE01 707 aa2.94□□□□□ -1.94
PCM1-220ENST00000523896 FAM71CQ8NEG0 241 aa2.94□□□□□ -1.94
PCM1-220ENST00000523896 WDR36Q8NI36 951 aaKnown RBP2.94□□□□□ -1.94
PCM1-220ENST00000523896 TBCKQ8TEA7 893 aa2.94□□□□□ -1.94
PCM1-220ENST00000523896 RAB3CQ96E17 227 aa2.94□□□□□ -1.94
PCM1-220ENST00000523896 FAM111AQ96PZ2 611 aa2.94□□□□□ -1.94
PCM1-220ENST00000523896 KCNK16Q96T55 309 aa2.94□□□□□ -1.94
PCM1-220ENST00000523896 APOL2Q9BQE5 337 aa2.94□□□□□ -1.94
PCM1-220ENST00000523896 ESM1Q9NQ30 184 aa2.94□□□□□ -1.94
PCM1-220ENST00000523896 RPS10P5Q9NQ39 176 aa2.94□□□□□ -1.94
PCM1-220ENST00000523896 SENP1Q9P0U3 644 aa2.94□□□□□ -1.94
PCM1-220ENST00000523896 DHRS4-AS1Q9P1J3 65 aa2.94□□□□□ -1.94
PCM1-220ENST00000523896 ARMCX1Q9P291 453 aa2.94□□□□□ -1.94
PCM1-220ENST00000523896 RCOR3Q9P2K3 495 aaPredicted RBP2.94□□□□□ -1.94
PCM1-220ENST00000523896 ODF2LQ9ULJ1 636 aa2.94□□□□□ -1.94
PCM1-220ENST00000523896 NUDCQ9Y266 331 aa2.94□□□□□ -1.94
PCM1-220ENST00000523896 KLF2Q9Y5W3 355 aaPredicted RBP2.94□□□□□ -1.94
PCM1-220ENST00000523896 NINLQ9Y2I6 1382 aa2.94□□□□□ -1.94
PCM1-220ENST00000523896 TCOF1Q13428 1488 aaKnown RBP2.94□□□□□ -1.94
PCM1-220ENST00000523896 BCL9LQ86UU0 1499 aa2.94□□□□□ -1.94
PCM1-220ENST00000523896 RAPGEF2Q9Y4G8 1499 aa2.94□□□□□ -1.94
PCM1-220ENST00000523896 SYNMO15061 1565 aa2.93□□□□□ -1.94
PCM1-220ENST00000523896 ABCA8O94911 1581 aa2.93□□□□□ -1.94
PCM1-220ENST00000523896 DENND4BO75064 1496 aaPredicted RBP2.93□□□□□ -1.94
PCM1-220ENST00000523896 NEO1Q92859 1461 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms