RNA–Protein interactions for RNA: ENST00000523125.5

VEGFA-223, Transcript of vascular endothelial growth factor A, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VEGFA-223	ENST00000523125	MPDZ	O75970	2070 aa		11.28	□□□□□ -0.6
VEGFA-223	ENST00000523125	PRAMEF25	A6NGN4	478 aa		11.28	□□□□□ -0.6
VEGFA-223	ENST00000523125	AHRR	A9YTQ3	701 aa		11.28	□□□□□ -0.6
VEGFA-223	ENST00000523125		B4DXG7	233 aa		11.28	□□□□□ -0.6
VEGFA-223	ENST00000523125	NPIPB8	E9PQR5	432 aa		11.28	□□□□□ -0.6
VEGFA-223	ENST00000523125	SNPH	O15079	494 aa		11.28	□□□□□ -0.6
VEGFA-223	ENST00000523125	REM1	O75628	298 aa		11.28	□□□□□ -0.6
VEGFA-223	ENST00000523125	EPPIN	O95925	133 aa		11.28	□□□□□ -0.6
VEGFA-223	ENST00000523125	JUN	P05412	331 aa	Known RBP	11.28	□□□□□ -0.6
VEGFA-223	ENST00000523125	BMP7	P18075	431 aa		11.28	□□□□□ -0.6
VEGFA-223	ENST00000523125	PRPH2	P23942	346 aa		11.28	□□□□□ -0.6
VEGFA-223	ENST00000523125	TACR1	P25103	407 aa		11.28	□□□□□ -0.6
VEGFA-223	ENST00000523125	CEACAM8	P31997	349 aa	Predicted RBP	11.28	□□□□□ -0.6
VEGFA-223	ENST00000523125	WNT3	P56703	355 aa		11.28	□□□□□ -0.6
VEGFA-223	ENST00000523125	VSNL1	P62760	191 aa		11.28	□□□□□ -0.6
VEGFA-223	ENST00000523125	PSG6	Q00889	435 aa		11.28	□□□□□ -0.6
VEGFA-223	ENST00000523125	TLE4	Q04727	773 aa		11.28	□□□□□ -0.6
VEGFA-223	ENST00000523125	TOMM20	Q15388	145 aa		11.28	□□□□□ -0.6
VEGFA-223	ENST00000523125	IMPG1	Q17R60	797 aa		11.28	□□□□□ -0.6
VEGFA-223	ENST00000523125	ERCC6L	Q2NKX8	1250 aa		11.28	□□□□□ -0.6
VEGFA-223	ENST00000523125	ACSF3	Q4G176	576 aa	Predicted RBP	11.28	□□□□□ -0.6
VEGFA-223	ENST00000523125	POMZP3	Q6PJE2	187 aa		11.28	□□□□□ -0.6
VEGFA-223	ENST00000523125		Q6ZSR9	355 aa		11.28	□□□□□ -0.6
VEGFA-223	ENST00000523125	YRDC	Q86U90	279 aa	Known RBP	11.28	□□□□□ -0.6
VEGFA-223	ENST00000523125	FAM9C	Q8IZT9	166 aa		11.28	□□□□□ -0.6
VEGFA-223	ENST00000523125	BANP	Q8N9N5	519 aa		11.28	□□□□□ -0.6
VEGFA-223	ENST00000523125	CCDC63	Q8NA47	563 aa		11.28	□□□□□ -0.6
VEGFA-223	ENST00000523125	NAXE	Q8NCW5	288 aa		11.28	□□□□□ -0.6
VEGFA-223	ENST00000523125	TNIP2	Q8NFZ5	429 aa		11.28	□□□□□ -0.6
VEGFA-223	ENST00000523125	OR4N2	Q8NGD1	307 aa		11.28	□□□□□ -0.6
VEGFA-223	ENST00000523125	OR2T11	Q8NH01	316 aa		11.28	□□□□□ -0.6
VEGFA-223	ENST00000523125	CDC26	Q8NHZ8	85 aa		11.28	□□□□□ -0.6
VEGFA-223	ENST00000523125	WDYHV1	Q96HA8	205 aa		11.28	□□□□□ -0.6
VEGFA-223	ENST00000523125	METTL2A	Q96IZ6	378 aa	Known RBP	11.28	□□□□□ -0.6
VEGFA-223	ENST00000523125	ADO	Q96SZ5	270 aa		11.28	□□□□□ -0.6
VEGFA-223	ENST00000523125	TUBB1	Q9H4B7	451 aa		11.28	□□□□□ -0.6
VEGFA-223	ENST00000523125	MCCC2	Q9HCC0	563 aa		11.28	□□□□□ -0.6
VEGFA-223	ENST00000523125	SERHL	Q9NQF3	203 aa		11.28	□□□□□ -0.6
VEGFA-223	ENST00000523125	RRAGD	Q9NQL2	400 aa	Predicted RBP	11.28	□□□□□ -0.6
VEGFA-223	ENST00000523125	GIMAP4	Q9NUV9	329 aa		11.28	□□□□□ -0.6
VEGFA-223	ENST00000523125	MKS1	Q9NXB0	559 aa		11.28	□□□□□ -0.6
VEGFA-223	ENST00000523125	MAPRE3	Q9UPY8	281 aa		11.28	□□□□□ -0.6
VEGFA-223	ENST00000523125	WBP11	Q9Y2W2	641 aa	Known RBP	11.28	□□□□□ -0.6
VEGFA-223	ENST00000523125	NUP214	P35658	2090 aa	Predicted RBP	11.28	□□□□□ -0.6
VEGFA-223	ENST00000523125		A0A087WV62	115 aa		11.27	□□□□□ -0.61
VEGFA-223	ENST00000523125	TLDC2	A0PJX2	215 aa		11.27	□□□□□ -0.61
VEGFA-223	ENST00000523125	PLOD2	O00469	737 aa		11.27	□□□□□ -0.61
VEGFA-223	ENST00000523125	TRIM13	O60858	407 aa		11.27	□□□□□ -0.61
VEGFA-223	ENST00000523125	ABCB7	O75027	752 aa		11.27	□□□□□ -0.61
VEGFA-223	ENST00000523125	SEC22B	O75396	215 aa		11.27	□□□□□ -0.61
VEGFA-223	ENST00000523125	CRCP	O75575	148 aa		11.27	□□□□□ -0.61
VEGFA-223	ENST00000523125	PSMG1	O95456	288 aa		11.27	□□□□□ -0.61
VEGFA-223	ENST00000523125	NUDT17	P0C025	328 aa		11.27	□□□□□ -0.61
VEGFA-223	ENST00000523125	MC3R	P41968	323 aa		11.27	□□□□□ -0.61
VEGFA-223	ENST00000523125	GAS1	P54826	345 aa		11.27	□□□□□ -0.61
VEGFA-223	ENST00000523125	RNF165	Q6ZSG1	346 aa		11.27	□□□□□ -0.61
VEGFA-223	ENST00000523125	TRABD2A	Q86V40	505 aa		11.27	□□□□□ -0.61
VEGFA-223	ENST00000523125	SLC44A2	Q8IWA5	706 aa	Predicted RBP	11.27	□□□□□ -0.61
VEGFA-223	ENST00000523125	RELL2	Q8NC24	303 aa	Predicted RBP	11.27	□□□□□ -0.61
VEGFA-223	ENST00000523125	TMCO6	Q96DC7	493 aa		11.27	□□□□□ -0.61
VEGFA-223	ENST00000523125	FCRL1	Q96LA6	429 aa		11.27	□□□□□ -0.61
VEGFA-223	ENST00000523125	AMDHD1	Q96NU7	426 aa		11.27	□□□□□ -0.61
VEGFA-223	ENST00000523125	OR2B2	Q9GZK3	357 aa		11.27	□□□□□ -0.61
VEGFA-223	ENST00000523125	STMN4	Q9H169	189 aa	Predicted RBP	11.27	□□□□□ -0.61
VEGFA-223	ENST00000523125	GLIPR2	Q9H4G4	154 aa		11.27	□□□□□ -0.61
VEGFA-223	ENST00000523125	MIEF1	Q9NQG6	463 aa		11.27	□□□□□ -0.61
VEGFA-223	ENST00000523125	TAS2R9	Q9NYW1	312 aa		11.27	□□□□□ -0.61
VEGFA-223	ENST00000523125	KLRF1	Q9NZS2	232 aa		11.27	□□□□□ -0.61
VEGFA-223	ENST00000523125	C19orf53	Q9UNZ5	99 aa	Predicted RBP	11.27	□□□□□ -0.61
VEGFA-223	ENST00000523125	TEP1	Q99973	2627 aa	Known RBP	11.26	□□□□□ -0.61
VEGFA-223	ENST00000523125	CCDC168	Q8NDH2	2452 aa		11.26	□□□□□ -0.61
VEGFA-223	ENST00000523125	HSPB2	A8KAH6	182 aa		11.26	□□□□□ -0.61
VEGFA-223	ENST00000523125	C17orf51	A8MQB3	221 aa		11.26	□□□□□ -0.61
VEGFA-223	ENST00000523125	FAM47E-STBD1	D6RA91	191 aa		11.26	□□□□□ -0.61
VEGFA-223	ENST00000523125	UPK1A	O00322	258 aa		11.26	□□□□□ -0.61
VEGFA-223	ENST00000523125	SLC28A1	O00337	649 aa		11.26	□□□□□ -0.61
VEGFA-223	ENST00000523125	AZIN1	O14977	448 aa		11.26	□□□□□ -0.61
VEGFA-223	ENST00000523125	CBR3	O75828	277 aa		11.26	□□□□□ -0.61
VEGFA-223	ENST00000523125	ALDH3A1	P30838	453 aa		11.26	□□□□□ -0.61
VEGFA-223	ENST00000523125	TIMP3	P35625	211 aa		11.26	□□□□□ -0.61
VEGFA-223	ENST00000523125	NCBP2	P52298	156 aa	Known RBP eCLIP	11.26	□□□□□ -0.61
VEGFA-223	ENST00000523125	PNLIPRP2	P54317	469 aa		11.26	□□□□□ -0.61
VEGFA-223	ENST00000523125	HSPB2	Q16082	182 aa		11.26	□□□□□ -0.61
VEGFA-223	ENST00000523125	SLC25A35	Q3KQZ1	300 aa		11.26	□□□□□ -0.61
VEGFA-223	ENST00000523125	UGT3A2	Q3SY77	523 aa		11.26	□□□□□ -0.61
VEGFA-223	ENST00000523125	KANK2	Q63ZY3	851 aa		11.26	□□□□□ -0.61
VEGFA-223	ENST00000523125	NSUN5P2	Q63ZY6	315 aa		11.26	□□□□□ -0.61
VEGFA-223	ENST00000523125	TMEM107	Q6UX40	140 aa		11.26	□□□□□ -0.61
VEGFA-223	ENST00000523125	IKBIP	Q70UQ0	350 aa		11.26	□□□□□ -0.61
VEGFA-223	ENST00000523125	LARP4	Q71RC2	724 aa	Known RBP eCLIP	11.26	□□□□□ -0.61	1e-25	■□□□□ 10.3
VEGFA-223	ENST00000523125	PLCZ1	Q86YW0	608 aa		11.26	□□□□□ -0.61
VEGFA-223	ENST00000523125	LACC1	Q8IV20	430 aa		11.26	□□□□□ -0.61
VEGFA-223	ENST00000523125	PM20D2	Q8IYS1	436 aa		11.26	□□□□□ -0.61
VEGFA-223	ENST00000523125	OR2L13	Q8N349	312 aa		11.26	□□□□□ -0.61
VEGFA-223	ENST00000523125	RIBC1	Q8N443	379 aa	Predicted RBP	11.26	□□□□□ -0.61
VEGFA-223	ENST00000523125	AEN	Q8WTP8	325 aa	Known RBP	11.26	□□□□□ -0.61
VEGFA-223	ENST00000523125	ABTB1	Q969K4	478 aa	Predicted RBP	11.26	□□□□□ -0.61
VEGFA-223	ENST00000523125	EFHD2	Q96C19	240 aa	Predicted RBP	11.26	□□□□□ -0.61
VEGFA-223	ENST00000523125	ELP4	Q96EB1	424 aa		11.26	□□□□□ -0.61
VEGFA-223	ENST00000523125	APOPT1	Q96IL0	206 aa		11.26	□□□□□ -0.61

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