RNA–Protein interactions for RNA: ENST00000522900.5

SPIDR-220, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 692 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-220ENST00000522900 DCST1Q5T197 706 aa17.05■□□□□ 0.32
SPIDR-220ENST00000522900 VASNQ6EMK4 673 aa17.05■□□□□ 0.32
SPIDR-220ENST00000522900 TMEM107Q6UX40 140 aa17.05■□□□□ 0.32
SPIDR-220ENST00000522900 SLC44A2Q8IWA5 706 aaPredicted RBP17.05■□□□□ 0.32
SPIDR-220ENST00000522900 FAM83FQ8NEG4 500 aaPredicted RBP17.05■□□□□ 0.32
SPIDR-220ENST00000522900 GFM2Q969S9 779 aaKnown RBP17.05■□□□□ 0.32
SPIDR-220ENST00000522900 SLC35A4Q96G79 324 aa17.05■□□□□ 0.32
SPIDR-220ENST00000522900 LURAP1Q96LR2 239 aa17.05■□□□□ 0.32
SPIDR-220ENST00000522900 FAM111AQ96PZ2 611 aa17.05■□□□□ 0.32
SPIDR-220ENST00000522900 SERHLQ9NQF3 203 aa17.05■□□□□ 0.32
SPIDR-220ENST00000522900 MIEF1Q9NQG6 463 aa17.05■□□□□ 0.32
SPIDR-220ENST00000522900 KLRF1Q9NZS2 232 aa17.05■□□□□ 0.32
SPIDR-220ENST00000522900 SENP1Q9P0U3 644 aa17.05■□□□□ 0.32
SPIDR-220ENST00000522900 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.05■□□□□ 0.32
SPIDR-220ENST00000522900 LGALS13Q9UHV8 139 aa17.05■□□□□ 0.32
SPIDR-220ENST00000522900 PCDHGB3Q9Y5G1 929 aa17.05■□□□□ 0.32
SPIDR-220ENST00000522900 V9GYY5 206 aaPredicted RBP17.05■□□□□ 0.32
SPIDR-220ENST00000522900 ABCA12Q86UK0 2595 aa17.05■□□□□ 0.32
SPIDR-220ENST00000522900 PRAMEF25A6NGN4 478 aa17.04■□□□□ 0.32
SPIDR-220ENST00000522900 TMEM233B4DJY2 109 aa17.04■□□□□ 0.32
SPIDR-220ENST00000522900 SLC28A1O00337 649 aa17.04■□□□□ 0.32
SPIDR-220ENST00000522900 SNPHO15079 494 aa17.04■□□□□ 0.32
SPIDR-220ENST00000522900 PRPH2P23942 346 aa17.04■□□□□ 0.32
SPIDR-220ENST00000522900 ELAVL4P26378 380 aaKnown RBP17.04■□□□□ 0.32
SPIDR-220ENST00000522900 MSX1P28360 303 aa17.04■□□□□ 0.32
SPIDR-220ENST00000522900 SNTA1Q13424 505 aa17.04■□□□□ 0.32
SPIDR-220ENST00000522900 UGT3A2Q3SY77 523 aa17.04■□□□□ 0.32
SPIDR-220ENST00000522900 RIPPLY2Q5TAB7 128 aa17.04■□□□□ 0.32
SPIDR-220ENST00000522900 KANK2Q63ZY3 851 aa17.04■□□□□ 0.32
SPIDR-220ENST00000522900 ANKRD26P1Q6NSI1 321 aa17.04■□□□□ 0.32
SPIDR-220ENST00000522900 LARP4Q71RC2 724 aaKnown RBP eCLIP17.04■□□□□ 0.325e-7■■■■■ 42.1
SPIDR-220ENST00000522900 AMDHD1Q96NU7 426 aa17.04■□□□□ 0.32
SPIDR-220ENST00000522900 UGT2B28Q9BY64 529 aa17.04■□□□□ 0.32
SPIDR-220ENST00000522900 LRTM1Q9HBL6 345 aa17.04■□□□□ 0.32
SPIDR-220ENST00000522900 C1orf109Q9NX04 203 aa17.04■□□□□ 0.32
SPIDR-220ENST00000522900 TAS2R9Q9NYW1 312 aa17.04■□□□□ 0.32
SPIDR-220ENST00000522900 MID2Q9UJV3 735 aa17.04■□□□□ 0.32
SPIDR-220ENST00000522900 DNAJC15Q9Y5T4 150 aa17.04■□□□□ 0.32
SPIDR-220ENST00000522900 TACC2O95359 2948 aa17.03■□□□□ 0.32
SPIDR-220ENST00000522900 CACNA1CQ13936 2221 aa17.03■□□□□ 0.32
SPIDR-220ENST00000522900 C17orf51A8MQB3 221 aa17.03■□□□□ 0.32
SPIDR-220ENST00000522900 AHRRA9YTQ3 701 aa17.03■□□□□ 0.32
SPIDR-220ENST00000522900 B4DXG7 233 aa17.03■□□□□ 0.32
SPIDR-220ENST00000522900 NPIPB8E9PQR5 432 aa17.03■□□□□ 0.32
SPIDR-220ENST00000522900 UPK1AO00322 258 aa17.03■□□□□ 0.32
SPIDR-220ENST00000522900 RGS14O43566 566 aa17.03■□□□□ 0.32
SPIDR-220ENST00000522900 SSTR2P30874 369 aa17.03■□□□□ 0.32
SPIDR-220ENST00000522900 PSG6Q00889 435 aa17.03■□□□□ 0.32
SPIDR-220ENST00000522900 IFFO1Q0D2I5 559 aa17.03■□□□□ 0.32
SPIDR-220ENST00000522900 ACSF3Q4G176 576 aaPredicted RBP17.03■□□□□ 0.32
SPIDR-220ENST00000522900 RFTN2Q52LD8 501 aaPredicted RBP17.03■□□□□ 0.32
SPIDR-220ENST00000522900 ARL13AQ5H913 290 aaPredicted RBP17.03■□□□□ 0.32
SPIDR-220ENST00000522900 NHSL2Q5HYW2 709 aa17.03■□□□□ 0.32
SPIDR-220ENST00000522900 OR5M10Q6IEU7 315 aa17.03■□□□□ 0.32
SPIDR-220ENST00000522900 ZNF551Q7Z340 670 aaPredicted RBP17.03■□□□□ 0.32
SPIDR-220ENST00000522900 WDR53Q7Z5U6 358 aaPredicted RBP17.03■□□□□ 0.32
SPIDR-220ENST00000522900 RIBC1Q8N443 379 aaPredicted RBP17.03■□□□□ 0.32
SPIDR-220ENST00000522900 TNIP2Q8NFZ5 429 aa17.03■□□□□ 0.32
SPIDR-220ENST00000522900 TCP10LQ8TDR4 215 aa17.03■□□□□ 0.32
SPIDR-220ENST00000522900 ABTB1Q969K4 478 aaPredicted RBP17.03■□□□□ 0.32
SPIDR-220ENST00000522900 EFHD2Q96C19 240 aaPredicted RBP17.03■□□□□ 0.32
SPIDR-220ENST00000522900 TMCO6Q96DC7 493 aa17.03■□□□□ 0.32
SPIDR-220ENST00000522900 C14orf79Q96F83 325 aa17.03■□□□□ 0.32
SPIDR-220ENST00000522900 WDYHV1Q96HA8 205 aa17.03■□□□□ 0.32
SPIDR-220ENST00000522900 TRMOQ9BU70 441 aa17.03■□□□□ 0.32
SPIDR-220ENST00000522900 PRDM14Q9GZV8 571 aa17.03■□□□□ 0.32
SPIDR-220ENST00000522900 IQCGQ9H095 443 aaKnown RBP17.03■□□□□ 0.32
SPIDR-220ENST00000522900 STMN4Q9H169 189 aaPredicted RBP17.03■□□□□ 0.32
SPIDR-220ENST00000522900 BAIAP2L1Q9UHR4 511 aa17.03■□□□□ 0.32
SPIDR-220ENST00000522900 C19orf53Q9UNZ5 99 aaPredicted RBP17.03■□□□□ 0.32
SPIDR-220ENST00000522900 CAMK2AQ9UQM7 478 aa17.03■□□□□ 0.32
SPIDR-220ENST00000522900 WBP11Q9Y2W2 641 aaKnown RBP17.03■□□□□ 0.32
SPIDR-220ENST00000522900 PKDREJQ9NTG1 2253 aa17.03■□□□□ 0.32
SPIDR-220ENST00000522900 PHF3Q92576 2039 aaKnown RBP17.03■□□□□ 0.32
SPIDR-220ENST00000522900 A0A087WV62 115 aa17.02■□□□□ 0.32
SPIDR-220ENST00000522900 PLOD2O00469 737 aa17.02■□□□□ 0.32
SPIDR-220ENST00000522900 AKAP10O43572 662 aa17.02■□□□□ 0.32
SPIDR-220ENST00000522900 CBR3O75828 277 aa17.02■□□□□ 0.32
SPIDR-220ENST00000522900 EPPINO95925 133 aa17.02■□□□□ 0.32
SPIDR-220ENST00000522900 SDC1P18827 310 aa17.02■□□□□ 0.32
SPIDR-220ENST00000522900 DLX5P56178 289 aa17.02■□□□□ 0.32
SPIDR-220ENST00000522900 TLE4Q04727 773 aa17.02■□□□□ 0.32
SPIDR-220ENST00000522900 ZNF155Q12901 538 aaPredicted RBP17.02■□□□□ 0.32
SPIDR-220ENST00000522900 ZNF385BQ569K4 471 aa17.02■□□□□ 0.32
SPIDR-220ENST00000522900 SH2D4BQ5SQS7 431 aa17.02■□□□□ 0.32
SPIDR-220ENST00000522900 WDR93Q6P2C0 686 aa17.02■□□□□ 0.32
SPIDR-220ENST00000522900 ZCCHC23Q6ZST2 131 aa17.02■□□□□ 0.32
SPIDR-220ENST00000522900 IKBIPQ70UQ0 350 aa17.02■□□□□ 0.32
SPIDR-220ENST00000522900 DMRTC2Q8IXT2 367 aaPredicted RBP17.02■□□□□ 0.32
SPIDR-220ENST00000522900 NAXEQ8NCW5 288 aa17.02■□□□□ 0.32
SPIDR-220ENST00000522900 CLHC1Q8NHS4 586 aa17.02■□□□□ 0.32
SPIDR-220ENST00000522900 RNF138Q8WVD3 245 aa17.02■□□□□ 0.32
SPIDR-220ENST00000522900 ELP4Q96EB1 424 aa17.02■□□□□ 0.32
SPIDR-220ENST00000522900 METTL2AQ96IZ6 378 aaKnown RBP17.02■□□□□ 0.32
SPIDR-220ENST00000522900 FCRL1Q96LA6 429 aa17.02■□□□□ 0.32
SPIDR-220ENST00000522900 ROPN1BQ9BZX4 212 aaPredicted RBP17.02■□□□□ 0.32
SPIDR-220ENST00000522900 ROPN1Q9HAT0 212 aaPredicted RBP17.02■□□□□ 0.32
SPIDR-220ENST00000522900 FBXL2Q9UKC9 423 aa17.02■□□□□ 0.32
SPIDR-220ENST00000522900 OR10H1Q9Y4A9 318 aa17.02■□□□□ 0.32
SPIDR-220ENST00000522900 TRAF6Q9Y4K3 522 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms