RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 NHSL2Q5HYW2 709 aa18.86■□□□□ 0.61
SDCBP-209ENST00000522243 CES4AQ5XG92 561 aa18.86■□□□□ 0.61
SDCBP-209ENST00000522243 CLEC6AQ6EIG7 209 aa18.86■□□□□ 0.61
SDCBP-209ENST00000522243 FAM71E1Q6IPT2 247 aa18.86■□□□□ 0.61
SDCBP-209ENST00000522243 TMEM200AQ86VY9 491 aa18.86■□□□□ 0.61
SDCBP-209ENST00000522243 TDRPQ86YL5 185 aa18.86■□□□□ 0.61
SDCBP-209ENST00000522243 LACC1Q8IV20 430 aa18.86■□□□□ 0.61
SDCBP-209ENST00000522243 SLC44A2Q8IWA5 706 aaPredicted RBP18.86■□□□□ 0.61
SDCBP-209ENST00000522243 EIF1ADQ8N9N8 165 aaKnown RBP18.86■□□□□ 0.61
SDCBP-209ENST00000522243 ERP27Q96DN0 273 aa18.86■□□□□ 0.61
SDCBP-209ENST00000522243 SLC35A4Q96G79 324 aa18.86■□□□□ 0.61
SDCBP-209ENST00000522243 MIEF1Q9NQG6 463 aa18.86■□□□□ 0.61
SDCBP-209ENST00000522243 OXSMQ9NWU1 459 aa18.86■□□□□ 0.61
SDCBP-209ENST00000522243 KCNN3Q9UGI6 736 aa18.86■□□□□ 0.61
SDCBP-209ENST00000522243 L3MBTL1Q9Y468 752 aa18.86■□□□□ 0.61
SDCBP-209ENST00000522243 MYO1GB0I1T2 1018 aa18.85■□□□□ 0.61
SDCBP-209ENST00000522243 PLOD3O60568 738 aa18.85■□□□□ 0.61
SDCBP-209ENST00000522243 CBR3O75828 277 aa18.85■□□□□ 0.61
SDCBP-209ENST00000522243 IL2RAP01589 272 aa18.85■□□□□ 0.61
SDCBP-209ENST00000522243 KRT4P19013 534 aa18.85■□□□□ 0.61
SDCBP-209ENST00000522243 IL12BP29460 328 aa18.85■□□□□ 0.61
SDCBP-209ENST00000522243 UQCRC1P31930 480 aa18.85■□□□□ 0.61
SDCBP-209ENST00000522243 CEACAM8P31997 349 aaPredicted RBP18.85■□□□□ 0.61
SDCBP-209ENST00000522243 KRT20P35900 424 aa18.85■□□□□ 0.61
SDCBP-209ENST00000522243 NAA20P61599 178 aa18.85■□□□□ 0.61
SDCBP-209ENST00000522243 ZNF155Q12901 538 aaPredicted RBP18.85■□□□□ 0.61
SDCBP-209ENST00000522243 SH2D4BQ5SQS7 431 aa18.85■□□□□ 0.61
SDCBP-209ENST00000522243 OR5M10Q6IEU7 315 aa18.85■□□□□ 0.61
SDCBP-209ENST00000522243 ARSKQ6UWY0 536 aa18.85■□□□□ 0.61
SDCBP-209ENST00000522243 LARP4Q71RC2 724 aaKnown RBP eCLIP18.85■□□□□ 0.61
SDCBP-209ENST00000522243 TRIM46Q7Z4K8 759 aa18.85■□□□□ 0.61
SDCBP-209ENST00000522243 OR14L1PQ8NHC6 308 aa18.85■□□□□ 0.61
SDCBP-209ENST00000522243 EFHD2Q96C19 240 aaPredicted RBP18.85■□□□□ 0.61
SDCBP-209ENST00000522243 MYNNQ9NPC7 610 aa18.85■□□□□ 0.61
SDCBP-209ENST00000522243 RRAGDQ9NQL2 400 aaPredicted RBP18.85■□□□□ 0.61
SDCBP-209ENST00000522243 FIS1Q9Y3D6 152 aa18.85■□□□□ 0.61
SDCBP-209ENST00000522243 PTGDR2Q9Y5Y4 395 aa18.85■□□□□ 0.61
SDCBP-209ENST00000522243 MED12Q93074 2177 aa18.85■□□□□ 0.61
SDCBP-209ENST00000522243 CSMD1Q96PZ7 3565 aa18.85■□□□□ 0.61
SDCBP-209ENST00000522243 TLDC2A0PJX2 215 aa18.84■□□□□ 0.61
SDCBP-209ENST00000522243 H3BQF6 201 aa18.84■□□□□ 0.61
SDCBP-209ENST00000522243 DVL2O14641 736 aa18.84■□□□□ 0.61
SDCBP-209ENST00000522243 RSL1D1O76021 490 aaKnown RBP18.84■□□□□ 0.61
SDCBP-209ENST00000522243 TCEA1P23193 301 aaKnown RBP18.84■□□□□ 0.61
SDCBP-209ENST00000522243 TIMP3P35625 211 aa18.84■□□□□ 0.61
SDCBP-209ENST00000522243 MC3RP41968 323 aa18.84■□□□□ 0.61
SDCBP-209ENST00000522243 AGFG1P52594 562 aaKnown RBP18.84■□□□□ 0.61
SDCBP-209ENST00000522243 ZNF136P52737 540 aa18.84■□□□□ 0.61
SDCBP-209ENST00000522243 SRYQ05066 204 aa18.84■□□□□ 0.61
SDCBP-209ENST00000522243 LIPMQ5VYY2 423 aa18.84■□□□□ 0.61
SDCBP-209ENST00000522243 NSUN5P2Q63ZY6 315 aa18.84■□□□□ 0.61
SDCBP-209ENST00000522243 NOXRED1Q6NXP6 359 aa18.84■□□□□ 0.61
SDCBP-209ENST00000522243 TMEM107Q6UX40 140 aa18.84■□□□□ 0.61
SDCBP-209ENST00000522243 PLCZ1Q86YW0 608 aa18.84■□□□□ 0.61
SDCBP-209ENST00000522243 PUM2Q8TB72 1066 aaKnown RBP eCLIP18.84■□□□□ 0.61
SDCBP-209ENST00000522243 GLIPR2Q9H4G4 154 aa18.84■□□□□ 0.61
SDCBP-209ENST00000522243 TAS2R9Q9NYW1 312 aa18.84■□□□□ 0.61
SDCBP-209ENST00000522243 FBXL2Q9UKC9 423 aa18.84■□□□□ 0.61
SDCBP-209ENST00000522243 OR10H1Q9Y4A9 318 aa18.84■□□□□ 0.61
SDCBP-209ENST00000522243 C17orf51A8MQB3 221 aa18.83■□□□□ 0.6
SDCBP-209ENST00000522243 ABCB7O75027 752 aa18.83■□□□□ 0.6
SDCBP-209ENST00000522243 SEC22BO75396 215 aa18.83■□□□□ 0.6
SDCBP-209ENST00000522243 ZWINTO95229 277 aa18.83■□□□□ 0.6
SDCBP-209ENST00000522243 ACTL6AO96019 429 aa18.83■□□□□ 0.6
SDCBP-209ENST00000522243 UROSP10746 265 aa18.83■□□□□ 0.6
SDCBP-209ENST00000522243 GCKP35557 465 aa18.83■□□□□ 0.6
SDCBP-209ENST00000522243 STARP49675 285 aa18.83■□□□□ 0.6
SDCBP-209ENST00000522243 PNLIPRP2P54317 469 aa18.83■□□□□ 0.6
SDCBP-209ENST00000522243 PSG6Q00889 435 aa18.83■□□□□ 0.6
SDCBP-209ENST00000522243 SLC18A2Q05940 514 aa18.83■□□□□ 0.6
SDCBP-209ENST00000522243 EFR3AQ14156 821 aa18.83■□□□□ 0.6
SDCBP-209ENST00000522243 SF3B4Q15427 424 aaKnown RBP eCLIP18.83■□□□□ 0.6
SDCBP-209ENST00000522243 POMZP3Q6PJE2 187 aa18.83■□□□□ 0.6
SDCBP-209ENST00000522243 C10orf107Q8IVU9 208 aa18.83■□□□□ 0.6
SDCBP-209ENST00000522243 TRIM42Q8IWZ5 723 aa18.83■□□□□ 0.6
SDCBP-209ENST00000522243 ZZZ3Q8IYH5 903 aa18.83■□□□□ 0.6
SDCBP-209ENST00000522243 OR2W6PQ8NHA6 318 aa18.83■□□□□ 0.6
SDCBP-209ENST00000522243 GFM2Q969S9 779 aaKnown RBP18.83■□□□□ 0.6
SDCBP-209ENST00000522243 EGLN2Q96KS0 407 aa18.83■□□□□ 0.6
SDCBP-209ENST00000522243 OR2B2Q9GZK3 357 aa18.83■□□□□ 0.6
SDCBP-209ENST00000522243 STMN4Q9H169 189 aaPredicted RBP18.83■□□□□ 0.6
SDCBP-209ENST00000522243 L2HGDHQ9H9P8 463 aa18.83■□□□□ 0.6
SDCBP-209ENST00000522243 PPCSQ9HAB8 311 aa18.83■□□□□ 0.6
SDCBP-209ENST00000522243 CCL27Q9Y4X3 112 aa18.83■□□□□ 0.6
SDCBP-209ENST00000522243 WIF1Q9Y5W5 379 aa18.83■□□□□ 0.6
SDCBP-209ENST00000522243 CD8B2A6NJW9 211 aa18.82■□□□□ 0.6
SDCBP-209ENST00000522243 COQ9O75208 318 aa18.82■□□□□ 0.6
SDCBP-209ENST00000522243 TACR1P25103 407 aa18.82■□□□□ 0.6
SDCBP-209ENST00000522243 NTSP30990 170 aa18.82■□□□□ 0.6
SDCBP-209ENST00000522243 ASCL1P50553 236 aa18.82■□□□□ 0.6
SDCBP-209ENST00000522243 RCAN2Q14206 197 aa18.82■□□□□ 0.6
SDCBP-209ENST00000522243 PCLAFQ15004 111 aa18.82■□□□□ 0.6
SDCBP-209ENST00000522243 PLXDC2Q6UX71 529 aa18.82■□□□□ 0.6
SDCBP-209ENST00000522243 FAM76AQ8TAV0 307 aa18.82■□□□□ 0.6
SDCBP-209ENST00000522243 NRGNQ92686 78 aa18.82■□□□□ 0.6
SDCBP-209ENST00000522243 GATA5Q9BWX5 397 aaPredicted RBP18.82■□□□□ 0.6
SDCBP-209ENST00000522243 SLC24A3Q9HC58 644 aa18.82■□□□□ 0.6
SDCBP-209ENST00000522243 TAS2R10Q9NYW0 307 aa18.82■□□□□ 0.6
SDCBP-209ENST00000522243 MBD3L4A6NDZ8 208 aaPredicted RBP18.81■□□□□ 0.6
SDCBP-209ENST00000522243 MBD3L3A6NE82 208 aaPredicted RBP18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms