RNA–Protein interactions for RNA: ENST00000520944.5

SNHG6-203, Transcript of small nucleolar RNA host gene 6, humanhuman

TSL 1 (best) BASIC

Gene SNHG6, Length 638 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG6-203ENST00000520944 IL12BP29460 328 aa18.71■□□□□ 0.59
SNHG6-203ENST00000520944 UQCRC1P31930 480 aa18.71■□□□□ 0.59
SNHG6-203ENST00000520944 CEACAM8P31997 349 aaPredicted RBP18.71■□□□□ 0.59
SNHG6-203ENST00000520944 PEX19P40855 299 aa18.71■□□□□ 0.59
SNHG6-203ENST00000520944 PTGDSP41222 190 aa18.71■□□□□ 0.59
SNHG6-203ENST00000520944 EFR3AQ14156 821 aa18.71■□□□□ 0.59
SNHG6-203ENST00000520944 CEBPEQ15744 281 aa18.71■□□□□ 0.59
SNHG6-203ENST00000520944 NSUN5P2Q63ZY6 315 aa18.71■□□□□ 0.59
SNHG6-203ENST00000520944 FRMD7Q6ZUT3 714 aa18.71■□□□□ 0.59
SNHG6-203ENST00000520944 SH2D5Q6ZV89 423 aa18.71■□□□□ 0.59
SNHG6-203ENST00000520944 LARP4Q71RC2 724 aaKnown RBP eCLIP18.71■□□□□ 0.591e-6■■■■■ 28
SNHG6-203ENST00000520944 TRIM46Q7Z4K8 759 aa18.71■□□□□ 0.59
SNHG6-203ENST00000520944 TDRPQ86YL5 185 aa18.71■□□□□ 0.59
SNHG6-203ENST00000520944 SLC44A2Q8IWA5 706 aaPredicted RBP18.71■□□□□ 0.59
SNHG6-203ENST00000520944 OR14L1PQ8NHC6 308 aa18.71■□□□□ 0.59
SNHG6-203ENST00000520944 FAM76AQ8TAV0 307 aa18.71■□□□□ 0.59
SNHG6-203ENST00000520944 WDYHV1Q96HA8 205 aa18.71■□□□□ 0.59
SNHG6-203ENST00000520944 FOLH1BQ9HBA9 442 aa18.71■□□□□ 0.59
SNHG6-203ENST00000520944 ZNF629Q9UEG4 869 aaPredicted RBP18.71■□□□□ 0.59
SNHG6-203ENST00000520944 WBP11Q9Y2W2 641 aaKnown RBP18.71■□□□□ 0.59
SNHG6-203ENST00000520944 OR10H1Q9Y4A9 318 aa18.71■□□□□ 0.59
SNHG6-203ENST00000520944 SYT5O00445 386 aa18.7■□□□□ 0.58
SNHG6-203ENST00000520944 CT45A8P0DMV1 189 aa18.7■□□□□ 0.58
SNHG6-203ENST00000520944 CT45A9P0DMV2 189 aa18.7■□□□□ 0.58
SNHG6-203ENST00000520944 NCBP2P52298 156 aaKnown RBP eCLIP18.7■□□□□ 0.585e-14■■□□□ 12.6
SNHG6-203ENST00000520944 DLX5P56178 289 aa18.7■□□□□ 0.58
SNHG6-203ENST00000520944 CORO7P57737 925 aa18.7■□□□□ 0.58
SNHG6-203ENST00000520944 MRPS22P82650 360 aaKnown RBP18.7■□□□□ 0.58
SNHG6-203ENST00000520944 RCAN2Q14206 197 aa18.7■□□□□ 0.58
SNHG6-203ENST00000520944 CT45A2Q5DJT8 189 aa18.7■□□□□ 0.58
SNHG6-203ENST00000520944 ENPP6Q6UWR7 440 aa18.7■□□□□ 0.58
SNHG6-203ENST00000520944 WDSUB1Q8N9V3 476 aa18.7■□□□□ 0.58
SNHG6-203ENST00000520944 LRRN4CLQ8ND94 238 aa18.7■□□□□ 0.58
SNHG6-203ENST00000520944 OR7G2Q8NG99 324 aa18.7■□□□□ 0.58
SNHG6-203ENST00000520944 SLC35A4Q96G79 324 aa18.7■□□□□ 0.58
SNHG6-203ENST00000520944 VSTM2LQ96N03 204 aa18.7■□□□□ 0.58
SNHG6-203ENST00000520944 CALHM2Q9HA72 323 aa18.7■□□□□ 0.58
SNHG6-203ENST00000520944 OXSMQ9NWU1 459 aa18.7■□□□□ 0.58
SNHG6-203ENST00000520944 L3MBTL1Q9Y468 752 aa18.7■□□□□ 0.58
SNHG6-203ENST00000520944 CD8B2A6NJW9 211 aa18.69■□□□□ 0.58
SNHG6-203ENST00000520944 MYO1GB0I1T2 1018 aa18.69■□□□□ 0.58
SNHG6-203ENST00000520944 COQ9O75208 318 aa18.69■□□□□ 0.58
SNHG6-203ENST00000520944 RSL1D1O76021 490 aaKnown RBP18.69■□□□□ 0.58
SNHG6-203ENST00000520944 JUNP05412 331 aaKnown RBP18.69■□□□□ 0.58
SNHG6-203ENST00000520944 UROSP10746 265 aa18.69■□□□□ 0.58
SNHG6-203ENST00000520944 KRT4P19013 534 aa18.69■□□□□ 0.58
SNHG6-203ENST00000520944 KIR2DL3P43628 341 aa18.69■□□□□ 0.58
SNHG6-203ENST00000520944 WNT3P56703 355 aa18.69■□□□□ 0.58
SNHG6-203ENST00000520944 PLCZ1Q86YW0 608 aa18.69■□□□□ 0.58
SNHG6-203ENST00000520944 NAXEQ8NCW5 288 aa18.69■□□□□ 0.58
SNHG6-203ENST00000520944 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.69■□□□□ 0.58
SNHG6-203ENST00000520944 POLR3HQ9Y535 204 aaPredicted RBP18.69■□□□□ 0.58
SNHG6-203ENST00000520944 HCFC1P51610 2035 aa18.68■□□□□ 0.58
SNHG6-203ENST00000520944 KDM4EB2RXH2 506 aaPredicted RBP18.68■□□□□ 0.58
SNHG6-203ENST00000520944 TSPAN2O60636 221 aa18.68■□□□□ 0.58
SNHG6-203ENST00000520944 SEC22BO75396 215 aa18.68■□□□□ 0.58
SNHG6-203ENST00000520944 NME6O75414 186 aaPredicted RBP18.68■□□□□ 0.58
SNHG6-203ENST00000520944 SLITRK5O94991 958 aa18.68■□□□□ 0.58
SNHG6-203ENST00000520944 CYP4B1P13584 511 aa18.68■□□□□ 0.58
SNHG6-203ENST00000520944 CPN1P15169 458 aa18.68■□□□□ 0.58
SNHG6-203ENST00000520944 POU3F2P20265 443 aaPredicted RBP18.68■□□□□ 0.58
SNHG6-203ENST00000520944 NTSP30990 170 aa18.68■□□□□ 0.58
SNHG6-203ENST00000520944 ASCL1P50553 236 aa18.68■□□□□ 0.58
SNHG6-203ENST00000520944 PNLIPRP2P54317 469 aa18.68■□□□□ 0.58
SNHG6-203ENST00000520944 ZNF155Q12901 538 aaPredicted RBP18.68■□□□□ 0.58
SNHG6-203ENST00000520944 DCST1Q5T197 706 aa18.68■□□□□ 0.58
SNHG6-203ENST00000520944 LIPMQ5VYY2 423 aa18.68■□□□□ 0.58
SNHG6-203ENST00000520944 FAM71E1Q6IPT2 247 aa18.68■□□□□ 0.58
SNHG6-203ENST00000520944 NOXRED1Q6NXP6 359 aa18.68■□□□□ 0.58
SNHG6-203ENST00000520944 AAGABQ6PD74 315 aa18.68■□□□□ 0.58
SNHG6-203ENST00000520944 ZPLD1Q8TCW7 415 aa18.68■□□□□ 0.58
SNHG6-203ENST00000520944 MYNNQ9NPC7 610 aa18.68■□□□□ 0.58
SNHG6-203ENST00000520944 TAS2R10Q9NYW0 307 aa18.68■□□□□ 0.58
SNHG6-203ENST00000520944 TAS2R7Q9NYW3 318 aa18.68■□□□□ 0.58
SNHG6-203ENST00000520944 MID2Q9UJV3 735 aa18.68■□□□□ 0.58
SNHG6-203ENST00000520944 WIF1Q9Y5W5 379 aa18.68■□□□□ 0.58
SNHG6-203ENST00000520944 NCKAP5O14513 1909 aa18.68■□□□□ 0.58
SNHG6-203ENST00000520944 A0A087WV62 115 aa18.67■□□□□ 0.58
SNHG6-203ENST00000520944 SH2D4BQ5SQS7 431 aa18.67■□□□□ 0.58
SNHG6-203ENST00000520944 TMEM107Q6UX40 140 aa18.67■□□□□ 0.58
SNHG6-203ENST00000520944 NPSR1Q6W5P4 371 aa18.67■□□□□ 0.58
SNHG6-203ENST00000520944 IKBIPQ70UQ0 350 aa18.67■□□□□ 0.58
SNHG6-203ENST00000520944 IFNEQ86WN2 208 aa18.67■□□□□ 0.58
SNHG6-203ENST00000520944 TRIM42Q8IWZ5 723 aa18.67■□□□□ 0.58
SNHG6-203ENST00000520944 ZZZ3Q8IYH5 903 aa18.67■□□□□ 0.58
SNHG6-203ENST00000520944 RELL2Q8NC24 303 aaPredicted RBP18.67■□□□□ 0.58
SNHG6-203ENST00000520944 PUM2Q8TB72 1066 aaKnown RBP eCLIP18.67■□□□□ 0.582e-6■■■□□ 18.8
SNHG6-203ENST00000520944 EPS8L3Q8TE67 593 aaKnown RBP18.67■□□□□ 0.58
SNHG6-203ENST00000520944 RNASE6Q93091 150 aaKnown RBP18.67■□□□□ 0.58
SNHG6-203ENST00000520944 EFHD2Q96C19 240 aaPredicted RBP18.67■□□□□ 0.58
SNHG6-203ENST00000520944 METTL2AQ96IZ6 378 aaKnown RBP18.67■□□□□ 0.58
SNHG6-203ENST00000520944 OR2B2Q9GZK3 357 aa18.67■□□□□ 0.58
SNHG6-203ENST00000520944 IQCGQ9H095 443 aaKnown RBP18.67■□□□□ 0.58
SNHG6-203ENST00000520944 C12orf65Q9H3J6 166 aaKnown RBP18.67■□□□□ 0.58
SNHG6-203ENST00000520944 DDX18Q9NVP1 670 aaKnown RBP18.67■□□□□ 0.58
SNHG6-203ENST00000520944 FOXD3Q9UJU5 478 aaPredicted RBP18.67■□□□□ 0.58
SNHG6-203ENST00000520944 TEP1Q99973 2627 aaKnown RBP18.67■□□□□ 0.58
SNHG6-203ENST00000520944 MBD3L4A6NDZ8 208 aaPredicted RBP18.66■□□□□ 0.58
SNHG6-203ENST00000520944 MBD3L3A6NE82 208 aaPredicted RBP18.66■□□□□ 0.58
SNHG6-203ENST00000520944 MBD3L5A6NJ08 208 aaPredicted RBP18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms