RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 NSRP1Q9H0G5 558 aaKnown RBP2.9□□□□□ -1.95
VPS13B-207ENST00000518569 HSD3B7Q9H2F3 369 aa2.9□□□□□ -1.95
VPS13B-207ENST00000518569 VCX3BQ9H321 246 aa2.9□□□□□ -1.95
VPS13B-207ENST00000518569 DPEP3Q9H4B8 488 aa2.9□□□□□ -1.95
VPS13B-207ENST00000518569 LRRC40Q9H9A6 602 aa2.9□□□□□ -1.95
VPS13B-207ENST00000518569 GDF3Q9NR23 364 aa2.9□□□□□ -1.95
VPS13B-207ENST00000518569 FAM212BQ9NTI7 297 aaPredicted RBP2.9□□□□□ -1.95
VPS13B-207ENST00000518569 DDX28Q9NUL7 540 aaKnown RBP2.9□□□□□ -1.95
VPS13B-207ENST00000518569 NINJ2Q9NZG7 142 aa2.9□□□□□ -1.95
VPS13B-207ENST00000518569 ZNF581Q9P0T4 197 aa2.9□□□□□ -1.95
VPS13B-207ENST00000518569 FAM153AQ9UHL3 310 aa2.9□□□□□ -1.95
VPS13B-207ENST00000518569 ATP6V1HQ9UI12 483 aa2.9□□□□□ -1.95
VPS13B-207ENST00000518569 MRTO4Q9UKD2 239 aaKnown RBP2.9□□□□□ -1.95
VPS13B-207ENST00000518569 STK38LQ9Y2H1 464 aa2.9□□□□□ -1.95
VPS13B-207ENST00000518569 CPQQ9Y646 472 aa2.9□□□□□ -1.95
VPS13B-207ENST00000518569 MAP3K19Q56UN5 1328 aa2.9□□□□□ -1.95
VPS13B-207ENST00000518569 POLA1P09884 1462 aaPredicted RBP2.9□□□□□ -1.95
VPS13B-207ENST00000518569 ABCC10Q5T3U5 1492 aa2.9□□□□□ -1.95
VPS13B-207ENST00000518569 MAGI1Q96QZ7 1491 aaPredicted RBP2.9□□□□□ -1.95
VPS13B-207ENST00000518569 RIMS1Q86UR5 1692 aaKnown RBP2.89□□□□□ -1.95
VPS13B-207ENST00000518569 A0A1B0GTH9 108 aa2.89□□□□□ -1.95
VPS13B-207ENST00000518569 TRIM49BA6NDI0 452 aa2.89□□□□□ -1.95
VPS13B-207ENST00000518569 YJEFN3A6XGL0 299 aa2.89□□□□□ -1.95
VPS13B-207ENST00000518569 RNF212BA8MTL3 300 aa2.89□□□□□ -1.95
VPS13B-207ENST00000518569 VGLL3A8MV65 326 aa2.89□□□□□ -1.95
VPS13B-207ENST00000518569 MEI4A8MW99 385 aa2.89□□□□□ -1.95
VPS13B-207ENST00000518569 H0YHG0 523 aa2.89□□□□□ -1.95
VPS13B-207ENST00000518569 MAPK13O15264 365 aa2.89□□□□□ -1.95
VPS13B-207ENST00000518569 GPRIN2O60269 458 aa2.89□□□□□ -1.95
VPS13B-207ENST00000518569 SRSF10O75494 262 aaKnown RBP2.89□□□□□ -1.95
VPS13B-207ENST00000518569 FLOT1O75955 427 aa2.89□□□□□ -1.95
VPS13B-207ENST00000518569 ANXA9O76027 345 aa2.89□□□□□ -1.95
VPS13B-207ENST00000518569 RHOBTB1O94844 696 aa2.89□□□□□ -1.95
VPS13B-207ENST00000518569 HPP00738 406 aa2.89□□□□□ -1.95
VPS13B-207ENST00000518569 CALCAP01258 141 aa2.89□□□□□ -1.95
VPS13B-207ENST00000518569 EZRP15311 586 aaKnown RBP2.89□□□□□ -1.95
VPS13B-207ENST00000518569 ZNF3P17036 446 aa2.89□□□□□ -1.95
VPS13B-207ENST00000518569 BCL3P20749 454 aa2.89□□□□□ -1.95
VPS13B-207ENST00000518569 GALP22466 123 aa2.89□□□□□ -1.95
VPS13B-207ENST00000518569 IDI1Q13907 227 aa2.89□□□□□ -1.95
VPS13B-207ENST00000518569 P2RY14Q15391 338 aa2.89□□□□□ -1.95
VPS13B-207ENST00000518569 PCK2Q16822 640 aa2.89□□□□□ -1.95
VPS13B-207ENST00000518569 ATAD3BQ5T9A4 648 aa2.89□□□□□ -1.95
VPS13B-207ENST00000518569 REP15Q6BDI9 236 aa2.89□□□□□ -1.95
VPS13B-207ENST00000518569 RHBDD2Q6NTF9 364 aa2.89□□□□□ -1.95
VPS13B-207ENST00000518569 SLC25A24Q6NUK1 477 aa2.89□□□□□ -1.95
VPS13B-207ENST00000518569 ARMCX5Q6P1M9 558 aa2.89□□□□□ -1.95
VPS13B-207ENST00000518569 AFTPHQ6ULP2 937 aa2.89□□□□□ -1.95
VPS13B-207ENST00000518569 ZNF410Q86VK4 478 aa2.89□□□□□ -1.95
VPS13B-207ENST00000518569 COMTD1Q86VU5 262 aa2.89□□□□□ -1.95
VPS13B-207ENST00000518569 CCDC71Q8IV32 467 aaPredicted RBP2.89□□□□□ -1.95
VPS13B-207ENST00000518569 WDR49Q8IV35 697 aa2.89□□□□□ -1.95
VPS13B-207ENST00000518569 CDH26Q8IXH8 852 aa2.89□□□□□ -1.95
VPS13B-207ENST00000518569 LINC00469Q8N7U9 141 aa2.89□□□□□ -1.95
VPS13B-207ENST00000518569 FLVCR1-AS1Q8TAF5 88 aa2.89□□□□□ -1.95
VPS13B-207ENST00000518569 ST7LQ8TDW4 575 aa2.89□□□□□ -1.95
VPS13B-207ENST00000518569 CDKL2Q92772 493 aa2.89□□□□□ -1.95
VPS13B-207ENST00000518569 NCLNQ969V3 563 aa2.89□□□□□ -1.95
VPS13B-207ENST00000518569 PNPLA2Q96AD5 504 aa2.89□□□□□ -1.95
VPS13B-207ENST00000518569 SLCO4A1Q96BD0 722 aa2.89□□□□□ -1.95
VPS13B-207ENST00000518569 NTNG2Q96CW9 530 aa2.89□□□□□ -1.95
VPS13B-207ENST00000518569 C16orf58Q96GQ5 468 aa2.89□□□□□ -1.95
VPS13B-207ENST00000518569 TPD52L3Q96J77 140 aa2.89□□□□□ -1.95
VPS13B-207ENST00000518569 CCDC77Q9BR77 488 aa2.89□□□□□ -1.95
VPS13B-207ENST00000518569 RIOK1Q9BRS2 568 aaKnown RBP2.89□□□□□ -1.95
VPS13B-207ENST00000518569 UQCC2Q9BRT2 126 aa2.89□□□□□ -1.95
VPS13B-207ENST00000518569 NACA2Q9H009 215 aa2.89□□□□□ -1.95
VPS13B-207ENST00000518569 CXXC4Q9H2H0 198 aa2.89□□□□□ -1.95
VPS13B-207ENST00000518569 RPS10P5Q9NQ39 176 aa2.89□□□□□ -1.95
VPS13B-207ENST00000518569 PRMT8Q9NR22 394 aaPredicted RBP2.89□□□□□ -1.95
VPS13B-207ENST00000518569 FAM114A2Q9NRY5 505 aa2.89□□□□□ -1.95
VPS13B-207ENST00000518569 GLRX2Q9NS18 164 aa2.89□□□□□ -1.95
VPS13B-207ENST00000518569 HOMER3Q9NSC5 361 aa2.89□□□□□ -1.95
VPS13B-207ENST00000518569 ZCCHC3Q9NUD5 404 aaKnown RBP2.89□□□□□ -1.95
VPS13B-207ENST00000518569 SDAD1Q9NVU7 687 aaKnown RBP eCLIP2.89□□□□□ -1.95
VPS13B-207ENST00000518569 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP2.89□□□□□ -1.95
VPS13B-207ENST00000518569 TMOD2Q9NZR1 351 aa2.89□□□□□ -1.95
VPS13B-207ENST00000518569 VPS54Q9P1Q0 977 aa2.89□□□□□ -1.95
VPS13B-207ENST00000518569 CIDEBQ9UHD4 219 aa2.89□□□□□ -1.95
VPS13B-207ENST00000518569 SNX6Q9UNH7 406 aa2.89□□□□□ -1.95
VPS13B-207ENST00000518569 ATG4BQ9Y4P1 393 aa2.89□□□□□ -1.95
VPS13B-207ENST00000518569 GMEB1Q9Y692 573 aa2.89□□□□□ -1.95
VPS13B-207ENST00000518569 WDR19Q8NEZ3 1342 aa2.89□□□□□ -1.95
VPS13B-207ENST00000518569 TOP2AP11388 1531 aaKnown RBP2.88□□□□□ -1.95
VPS13B-207ENST00000518569 ABCC8Q09428 1581 aa2.88□□□□□ -1.95
VPS13B-207ENST00000518569 SH3PXD2BA1X283 911 aa2.88□□□□□ -1.95
VPS13B-207ENST00000518569 SLC9B1P1A6NJY1 282 aa2.88□□□□□ -1.95
VPS13B-207ENST00000518569 FOXI3A8MTJ6 420 aaPredicted RBP2.88□□□□□ -1.95
VPS13B-207ENST00000518569 ZNF879B4DU55 563 aa2.88□□□□□ -1.95
VPS13B-207ENST00000518569 GOLGA8SH3BPF8 625 aa2.88□□□□□ -1.95
VPS13B-207ENST00000518569 E2F3O00716 465 aa2.88□□□□□ -1.95
VPS13B-207ENST00000518569 ARPC1BO15143 372 aaKnown RBP2.88□□□□□ -1.95
VPS13B-207ENST00000518569 NUDT21O43809 227 aaKnown RBP2.88□□□□□ -1.95
VPS13B-207ENST00000518569 ERLIN1O75477 346 aa2.88□□□□□ -1.95
VPS13B-207ENST00000518569 CIB2O75838 187 aa2.88□□□□□ -1.95
VPS13B-207ENST00000518569 ALPPP05187 535 aa2.88□□□□□ -1.95
VPS13B-207ENST00000518569 FCER2P06734 321 aa2.88□□□□□ -1.95
VPS13B-207ENST00000518569 APRTP07741 180 aa2.88□□□□□ -1.95
VPS13B-207ENST00000518569 HMOX1P09601 288 aa2.88□□□□□ -1.95
VPS13B-207ENST00000518569 OR9G9P0C7N8 305 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms