RNA–Protein interactions for RNA: ENST00000517490.5

CPNE3-203, Transcript of copine 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE3, Length 4,865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-203ENST00000517490 UBXN7O94888 489 aa6.3□□□□□ -1.4
CPNE3-203ENST00000517490 PRKAR2AP13861 404 aaKnown RBP6.3□□□□□ -1.4
CPNE3-203ENST00000517490 PRKACAP17612 351 aa6.3□□□□□ -1.4
CPNE3-203ENST00000517490 ETV3P41162 512 aa6.3□□□□□ -1.4
CPNE3-203ENST00000517490 SLC1A3P43003 542 aa6.3□□□□□ -1.4
CPNE3-203ENST00000517490 MTNR1BP49286 362 aa6.3□□□□□ -1.4
CPNE3-203ENST00000517490 PFN3P60673 137 aa6.3□□□□□ -1.4
CPNE3-203ENST00000517490 LDLRAD1Q5T700 205 aa6.3□□□□□ -1.4
CPNE3-203ENST00000517490 PGBD2Q6P3X8 592 aa6.3□□□□□ -1.4
CPNE3-203ENST00000517490 ARSKQ6UWY0 536 aa6.3□□□□□ -1.4
CPNE3-203ENST00000517490 SERPINA13PQ6UXR4 307 aa6.3□□□□□ -1.4
CPNE3-203ENST00000517490 FAM46AQ96IP4 442 aaKnown RBP6.3□□□□□ -1.4
CPNE3-203ENST00000517490 SAMD11Q96NU1 681 aa6.3□□□□□ -1.4
CPNE3-203ENST00000517490 PKMYT1Q99640 499 aa6.3□□□□□ -1.4
CPNE3-203ENST00000517490 KATNBL1Q9H079 304 aa6.3□□□□□ -1.4
CPNE3-203ENST00000517490 A4GALTQ9NPC4 353 aa6.3□□□□□ -1.4
CPNE3-203ENST00000517490 IL36AQ9UHA7 158 aa6.3□□□□□ -1.4
CPNE3-203ENST00000517490 TNS1Q9HBL0 1735 aaKnown RBP6.3□□□□□ -1.4
CPNE3-203ENST00000517490 ZFC3H1O60293 1989 aaKnown RBP6.3□□□□□ -1.4
CPNE3-203ENST00000517490 A0A0G2JN53 185 aa6.3□□□□□ -1.4
CPNE3-203ENST00000517490 ANXA2P2A6NMY6 339 aa6.3□□□□□ -1.4
CPNE3-203ENST00000517490 KRT33AO76009 404 aa6.3□□□□□ -1.4
CPNE3-203ENST00000517490 SOX30O94993 753 aa6.3□□□□□ -1.4
CPNE3-203ENST00000517490 TFP02787 698 aa6.3□□□□□ -1.4
CPNE3-203ENST00000517490 ANXA2P07355 339 aaKnown RBP6.3□□□□□ -1.4
CPNE3-203ENST00000517490 BMP8BP34820 402 aa6.3□□□□□ -1.4
CPNE3-203ENST00000517490 GZMMP51124 257 aa6.3□□□□□ -1.4
CPNE3-203ENST00000517490 STXBP1P61764 594 aaKnown RBP6.3□□□□□ -1.4
CPNE3-203ENST00000517490 SEC23BQ15437 767 aa6.3□□□□□ -1.4
CPNE3-203ENST00000517490 SSX1Q16384 188 aa6.3□□□□□ -1.4
CPNE3-203ENST00000517490 KHDRBS2Q5VWX1 349 aaKnown RBP6.3□□□□□ -1.4
CPNE3-203ENST00000517490 C3P1Q6ZMU1 363 aa6.3□□□□□ -1.4
CPNE3-203ENST00000517490 QSOX2Q6ZRP7 698 aa6.3□□□□□ -1.4
CPNE3-203ENST00000517490 BMP8AQ7Z5Y6 402 aa6.3□□□□□ -1.4
CPNE3-203ENST00000517490 SDR16C5Q8N3Y7 309 aa6.3□□□□□ -1.4
CPNE3-203ENST00000517490 HORMAD2Q8N7B1 307 aa6.3□□□□□ -1.4
CPNE3-203ENST00000517490 SLC38A5Q8WUX1 472 aa6.3□□□□□ -1.4
CPNE3-203ENST00000517490 ADAMTS14Q8WXS8 1223 aa6.3□□□□□ -1.4
CPNE3-203ENST00000517490 NUS1Q96E22 293 aa6.3□□□□□ -1.4
CPNE3-203ENST00000517490 RADILQ96JH8 1075 aa6.3□□□□□ -1.4
CPNE3-203ENST00000517490 KATNB1Q9BVA0 655 aa6.3□□□□□ -1.4
CPNE3-203ENST00000517490 ALG8Q9BVK2 526 aa6.3□□□□□ -1.4
CPNE3-203ENST00000517490 KLF16Q9BXK1 252 aaPredicted RBP6.3□□□□□ -1.4
CPNE3-203ENST00000517490 PINK1Q9BXM7 581 aa6.3□□□□□ -1.4
CPNE3-203ENST00000517490 KCNK12Q9HB15 430 aa6.3□□□□□ -1.4
CPNE3-203ENST00000517490 QPCTLQ9NXS2 382 aa6.3□□□□□ -1.4
CPNE3-203ENST00000517490 RASD1Q9Y272 281 aa6.3□□□□□ -1.4
CPNE3-203ENST00000517490 ANKRD31Q8N7Z5 1873 aa6.3□□□□□ -1.4
CPNE3-203ENST00000517490 ABHD14A-ACY1A0A1B0GW23 586 aa6.3□□□□□ -1.4
CPNE3-203ENST00000517490 C1QTNF3-AMACRE9PGA6 284 aa6.3□□□□□ -1.4
CPNE3-203ENST00000517490 FAM227AF5H4B4 570 aa6.3□□□□□ -1.4
CPNE3-203ENST00000517490 MEN1O00255 615 aa6.3□□□□□ -1.4
CPNE3-203ENST00000517490 CACNB4O00305 520 aaPredicted RBP6.3□□□□□ -1.4
CPNE3-203ENST00000517490 AKR7A2O43488 359 aa6.3□□□□□ -1.4
CPNE3-203ENST00000517490 NCR1O76036 304 aa6.3□□□□□ -1.4
CPNE3-203ENST00000517490 HPGDP15428 266 aa6.3□□□□□ -1.4
CPNE3-203ENST00000517490 GNSP15586 552 aa6.3□□□□□ -1.4
CPNE3-203ENST00000517490 EPCAMP16422 314 aa6.3□□□□□ -1.4
CPNE3-203ENST00000517490 GIFP27352 417 aa6.3□□□□□ -1.4
CPNE3-203ENST00000517490 GRK5P34947 590 aa6.3□□□□□ -1.4
CPNE3-203ENST00000517490 CTBP2P56545 445 aa6.3□□□□□ -1.4
CPNE3-203ENST00000517490 RAB8AP61006 207 aa6.3□□□□□ -1.4
CPNE3-203ENST00000517490 GPLD1P80108 840 aa6.3□□□□□ -1.4
CPNE3-203ENST00000517490 POU4F2Q12837 409 aa6.3□□□□□ -1.4
CPNE3-203ENST00000517490 IRF3Q14653 427 aa6.3□□□□□ -1.4
CPNE3-203ENST00000517490 GRK1Q15835 563 aa6.3□□□□□ -1.4
CPNE3-203ENST00000517490 FAM209AQ5JX71 171 aa6.3□□□□□ -1.4
CPNE3-203ENST00000517490 CLLU1OSQ5K130 101 aa6.3□□□□□ -1.4
CPNE3-203ENST00000517490 RTP2Q5QGT7 225 aa6.3□□□□□ -1.4
CPNE3-203ENST00000517490 DEFB128Q7Z7B8 93 aa6.3□□□□□ -1.4
CPNE3-203ENST00000517490 CMTM8Q8IZV2 173 aa6.3□□□□□ -1.4
CPNE3-203ENST00000517490 OR56B4Q8NH76 319 aa6.3□□□□□ -1.4
CPNE3-203ENST00000517490 ELMOD3Q96FG2 381 aa6.3□□□□□ -1.4
CPNE3-203ENST00000517490 F2RL3Q96RI0 385 aa6.3□□□□□ -1.4
CPNE3-203ENST00000517490 LGR4Q9BXB1 951 aa6.3□□□□□ -1.4
CPNE3-203ENST00000517490 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.3□□□□□ -1.4
CPNE3-203ENST00000517490 MED17Q9NVC6 651 aa6.3□□□□□ -1.4
CPNE3-203ENST00000517490 BABAM2Q9NXR7 383 aa6.3□□□□□ -1.4
CPNE3-203ENST00000517490 TRBV5-4A0A0C4DH59 114 aa6.29□□□□□ -1.4
CPNE3-203ENST00000517490 RAF1P04049 648 aa6.29□□□□□ -1.4
CPNE3-203ENST00000517490 ETV5P41161 510 aa6.29□□□□□ -1.4
CPNE3-203ENST00000517490 CRYBB2P43320 205 aa6.29□□□□□ -1.4
CPNE3-203ENST00000517490 EVX1P49640 407 aa6.29□□□□□ -1.4
CPNE3-203ENST00000517490 ETV1P50549 477 aa6.29□□□□□ -1.4
CPNE3-203ENST00000517490 GFOD2Q3B7J2 385 aa6.29□□□□□ -1.4
CPNE3-203ENST00000517490 SYT14P1Q58G82 188 aa6.29□□□□□ -1.4
CPNE3-203ENST00000517490 OR5W2Q8NH69 310 aa6.29□□□□□ -1.4
CPNE3-203ENST00000517490 TFGQ92734 400 aaPredicted RBP6.29□□□□□ -1.4
CPNE3-203ENST00000517490 MAP6Q96JE9 813 aa6.29□□□□□ -1.4
CPNE3-203ENST00000517490 NECTIN4Q96NY8 510 aa6.29□□□□□ -1.4
CPNE3-203ENST00000517490 MCCC1Q96RQ3 725 aaPredicted RBP6.29□□□□□ -1.4
CPNE3-203ENST00000517490 C17orf62Q9BQA9 187 aa6.29□□□□□ -1.4
CPNE3-203ENST00000517490 TRMT61BQ9BVS5 477 aaKnown RBP6.29□□□□□ -1.4
CPNE3-203ENST00000517490 RAB11FIP5Q9BXF6 653 aa6.29□□□□□ -1.4
CPNE3-203ENST00000517490 ARL6Q9H0F7 186 aa6.29□□□□□ -1.4
CPNE3-203ENST00000517490 IMP3Q9NV31 184 aaKnown RBP6.29□□□□□ -1.4
CPNE3-203ENST00000517490 MED31Q9Y3C7 131 aa6.29□□□□□ -1.4
CPNE3-203ENST00000517490 FER1L6Q2WGJ9 1857 aa6.29□□□□□ -1.4
CPNE3-203ENST00000517490 KRBOX1C9JBD0 128 aa6.29□□□□□ -1.4
CPNE3-203ENST00000517490 GALTP07902 379 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms