RNA–Protein interactions for RNA: ENST00000516969.1

SCARNA20.4-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.4-201ENST00000516969 SLC5A8Q8N695 610 aa5.06□□□□□ -1.6
SCARNA20.4-201ENST00000516969 CDRT4Q8N9R6 151 aa5.06□□□□□ -1.6
SCARNA20.4-201ENST00000516969 ATG16L2Q8NAA4 619 aa5.06□□□□□ -1.6
SCARNA20.4-201ENST00000516969 ZBTB44Q8NCP5 570 aa5.06□□□□□ -1.6
SCARNA20.4-201ENST00000516969 ZNF555Q8NEP9 628 aa5.06□□□□□ -1.6
SCARNA20.4-201ENST00000516969 TSPAN14Q8NG11 270 aa5.06□□□□□ -1.6
SCARNA20.4-201ENST00000516969 OR10G2Q8NGC3 310 aa5.06□□□□□ -1.6
SCARNA20.4-201ENST00000516969 OR4D9Q8NGE8 314 aa5.06□□□□□ -1.6
SCARNA20.4-201ENST00000516969 OR51Q1Q8NH59 317 aa5.06□□□□□ -1.6
SCARNA20.4-201ENST00000516969 OR1L3Q8NH93 324 aa5.06□□□□□ -1.6
SCARNA20.4-201ENST00000516969 PHF10Q8WUB8 498 aaKnown RBP5.06□□□□□ -1.6
SCARNA20.4-201ENST00000516969 CDS1Q92903 461 aa5.06□□□□□ -1.6
SCARNA20.4-201ENST00000516969 ZNF501Q96CX3 271 aaPredicted RBP5.06□□□□□ -1.6
SCARNA20.4-201ENST00000516969 MMABQ96EY8 250 aaPredicted RBP5.06□□□□□ -1.6
SCARNA20.4-201ENST00000516969 OTUB1Q96FW1 271 aaPredicted RBP5.06□□□□□ -1.6
SCARNA20.4-201ENST00000516969 RMND5BQ96G75 393 aaPredicted RBP5.06□□□□□ -1.6
SCARNA20.4-201ENST00000516969 RBM18Q96H35 190 aaKnown RBP5.06□□□□□ -1.6
SCARNA20.4-201ENST00000516969 PEX11GQ96HA9 241 aa5.06□□□□□ -1.6
SCARNA20.4-201ENST00000516969 HRASLS5Q96KN8 279 aa5.06□□□□□ -1.6
SCARNA20.4-201ENST00000516969 ZNF578Q96N58 590 aaPredicted RBP5.06□□□□□ -1.6
SCARNA20.4-201ENST00000516969 OR1F2PQ96R84 312 aa5.06□□□□□ -1.6
SCARNA20.4-201ENST00000516969 FEVQ99581 238 aa5.06□□□□□ -1.6
SCARNA20.4-201ENST00000516969 PITX2Q99697 317 aa5.06□□□□□ -1.6
SCARNA20.4-201ENST00000516969 ARHGDIGQ99819 225 aa5.06□□□□□ -1.6
SCARNA20.4-201ENST00000516969 DPYSL5Q9BPU6 564 aa5.06□□□□□ -1.6
SCARNA20.4-201ENST00000516969 NUDT22Q9BRQ3 303 aa5.06□□□□□ -1.6
SCARNA20.4-201ENST00000516969 LMF2Q9BU23 707 aaKnown RBP5.06□□□□□ -1.6
SCARNA20.4-201ENST00000516969 GABARAPL3Q9BY60 117 aa5.06□□□□□ -1.6
SCARNA20.4-201ENST00000516969 ALOXE3Q9BYJ1 711 aa5.06□□□□□ -1.6
SCARNA20.4-201ENST00000516969 FAM192AQ9GZU8 254 aa5.06□□□□□ -1.6
SCARNA20.4-201ENST00000516969 ZNF350Q9GZX5 532 aa5.06□□□□□ -1.6
SCARNA20.4-201ENST00000516969 LRRN3Q9H3W5 708 aa5.06□□□□□ -1.6
SCARNA20.4-201ENST00000516969 GAREM1Q9H706 876 aa5.06□□□□□ -1.6
SCARNA20.4-201ENST00000516969 FSCN3Q9NQT6 498 aa5.06□□□□□ -1.6
SCARNA20.4-201ENST00000516969 PRTFDC1Q9NRG1 225 aa5.06□□□□□ -1.6
SCARNA20.4-201ENST00000516969 RLIMQ9NVW2 624 aa5.06□□□□□ -1.6
SCARNA20.4-201ENST00000516969 HCN3Q9P1Z3 774 aa5.06□□□□□ -1.6
SCARNA20.4-201ENST00000516969 KLHL3Q9UH77 587 aa5.06□□□□□ -1.6
SCARNA20.4-201ENST00000516969 SERTAD3Q9UJW9 196 aa5.06□□□□□ -1.6
SCARNA20.4-201ENST00000516969 NDRG4Q9ULP0 352 aaKnown RBP5.06□□□□□ -1.6
SCARNA20.4-201ENST00000516969 A4GNTQ9UNA3 340 aa5.06□□□□□ -1.6
SCARNA20.4-201ENST00000516969 SATB2Q9UPW6 733 aa5.06□□□□□ -1.6
SCARNA20.4-201ENST00000516969 MRPS33Q9Y291 106 aaKnown RBP5.06□□□□□ -1.6
SCARNA20.4-201ENST00000516969 SLC9A8Q9Y2E8 581 aa5.06□□□□□ -1.6
SCARNA20.4-201ENST00000516969 MYRFQ9Y2G1 1151 aa5.06□□□□□ -1.6
SCARNA20.4-201ENST00000516969 HCN4Q9Y3Q4 1203 aa5.06□□□□□ -1.6
SCARNA20.4-201ENST00000516969 TESMINQ9Y4I5 508 aa5.06□□□□□ -1.6
SCARNA20.4-201ENST00000516969 MMACHCQ9Y4U1 282 aa5.06□□□□□ -1.6
SCARNA20.4-201ENST00000516969 PCDHGA8Q9Y5G5 932 aa5.06□□□□□ -1.6
SCARNA20.4-201ENST00000516969 ORC6Q9Y5N6 252 aa5.06□□□□□ -1.6
SCARNA20.4-201ENST00000516969 HSPE1-MOB4S4R3N1 261 aa5.06□□□□□ -1.6
SCARNA20.4-201ENST00000516969 FRYLO94915 3013 aa5.06□□□□□ -1.6
SCARNA20.4-201ENST00000516969 COL27A1Q8IZC6 1860 aaPredicted RBP5.05□□□□□ -1.6
SCARNA20.4-201ENST00000516969 IGKV3D-11A0A0A0MRZ8 115 aa5.05□□□□□ -1.6
SCARNA20.4-201ENST00000516969 TRBV4-1A0A0J9YWV2 114 aa5.05□□□□□ -1.6
SCARNA20.4-201ENST00000516969 IGHV5-10-1A0A0J9YXX1 117 aa5.05□□□□□ -1.6
SCARNA20.4-201ENST00000516969 A0A1W2PQM1 296 aa5.05□□□□□ -1.6
SCARNA20.4-201ENST00000516969 SH3PXD2BA1X283 911 aa5.05□□□□□ -1.6
SCARNA20.4-201ENST00000516969 OR2W5A6NFC9 320 aa5.05□□□□□ -1.6
SCARNA20.4-201ENST00000516969 TTC36A6NLP5 189 aa5.05□□□□□ -1.6
SCARNA20.4-201ENST00000516969 A8MU76 341 aa5.05□□□□□ -1.6
SCARNA20.4-201ENST00000516969 PATE3B3GLJ2 98 aa5.05□□□□□ -1.6
SCARNA20.4-201ENST00000516969 ARHGAP33O14559 1287 aa5.05□□□□□ -1.6
SCARNA20.4-201ENST00000516969 BCKDKO14874 412 aa5.05□□□□□ -1.6
SCARNA20.4-201ENST00000516969 DSCR3O14972 297 aa5.05□□□□□ -1.6
SCARNA20.4-201ENST00000516969 OR10H2O60403 315 aa5.05□□□□□ -1.6
SCARNA20.4-201ENST00000516969 BRINP1O60477 761 aa5.05□□□□□ -1.6
SCARNA20.4-201ENST00000516969 TPST2O60704 377 aa5.05□□□□□ -1.6
SCARNA20.4-201ENST00000516969 COQ9O75208 318 aa5.05□□□□□ -1.6
SCARNA20.4-201ENST00000516969 STX11O75558 287 aa5.05□□□□□ -1.6
SCARNA20.4-201ENST00000516969 CCNB2O95067 398 aa5.05□□□□□ -1.6
SCARNA20.4-201ENST00000516969 CPNE6O95741 557 aa5.05□□□□□ -1.6
SCARNA20.4-201ENST00000516969 OXSR1O95747 527 aaPredicted RBP5.05□□□□□ -1.6
SCARNA20.4-201ENST00000516969 CER1O95813 267 aa5.05□□□□□ -1.6
SCARNA20.4-201ENST00000516969 ONECUT2O95948 504 aa5.05□□□□□ -1.6
SCARNA20.4-201ENST00000516969 GASTP01350 101 aa5.05□□□□□ -1.6
SCARNA20.4-201ENST00000516969 CLPSP04118 112 aa5.05□□□□□ -1.6
SCARNA20.4-201ENST00000516969 CFIP05156 583 aa5.05□□□□□ -1.6
SCARNA20.4-201ENST00000516969 ALPPP05187 535 aa5.05□□□□□ -1.6
SCARNA20.4-201ENST00000516969 H1F0P07305 194 aaKnown RBP5.05□□□□□ -1.6
SCARNA20.4-201ENST00000516969 THBS1P07996 1170 aa5.05□□□□□ -1.6
SCARNA20.4-201ENST00000516969 SYPP08247 313 aa5.05□□□□□ -1.6
SCARNA20.4-201ENST00000516969 ALOX5P09917 674 aa5.05□□□□□ -1.6
SCARNA20.4-201ENST00000516969 LINGO3P0C6S8 592 aa5.05□□□□□ -1.6
SCARNA20.4-201ENST00000516969 SP9P0CG40 484 aa5.05□□□□□ -1.6
SCARNA20.4-201ENST00000516969 CKMT1AP12532 417 aa5.05□□□□□ -1.6
SCARNA20.4-201ENST00000516969 CDH2P19022 906 aaPredicted RBP5.05□□□□□ -1.6
SCARNA20.4-201ENST00000516969 MAOAP21397 527 aa5.05□□□□□ -1.6
SCARNA20.4-201ENST00000516969 CRHBPP24387 322 aa5.05□□□□□ -1.6
SCARNA20.4-201ENST00000516969 EPHA2P29317 976 aa5.05□□□□□ -1.6
SCARNA20.4-201ENST00000516969 GABRA3P34903 492 aa5.05□□□□□ -1.6
SCARNA20.4-201ENST00000516969 STT3AP46977 705 aa5.05□□□□□ -1.6
SCARNA20.4-201ENST00000516969 OR1D4P47884 311 aa5.05□□□□□ -1.6
SCARNA20.4-201ENST00000516969 ALDH3B2P48448 385 aa5.05□□□□□ -1.6
SCARNA20.4-201ENST00000516969 PPM1FP49593 454 aaPredicted RBP5.05□□□□□ -1.6
SCARNA20.4-201ENST00000516969 ARL4DP49703 201 aa5.05□□□□□ -1.6
SCARNA20.4-201ENST00000516969 HLCSP50747 726 aa5.05□□□□□ -1.6
SCARNA20.4-201ENST00000516969 NR1H2P55055 460 aa5.05□□□□□ -1.6
SCARNA20.4-201ENST00000516969 EEF1A1P68104 462 aaKnown RBP5.05□□□□□ -1.6
SCARNA20.4-201ENST00000516969 RPP38P78345 283 aaKnown RBP5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms