RNA–Protein interactions for RNA: ENST00000516918.1

SCARNA11.1-201, small Cajal body-specific RNA 11, humanhuman

BASIC

Gene SCARNA11, Length 132 nt, Biotype scaRNA, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA11.1-201ENST00000516918 ZIC3O60481 467 aa6.3□□□□□ -1.4
SCARNA11.1-201ENST00000516918 KERAO60938 352 aa6.3□□□□□ -1.4
SCARNA11.1-201ENST00000516918 ERAL1O75616 437 aaKnown RBP6.3□□□□□ -1.4
SCARNA11.1-201ENST00000516918 REM1O75628 298 aa6.3□□□□□ -1.4
SCARNA11.1-201ENST00000516918 PLAUP00749 431 aa6.3□□□□□ -1.4
SCARNA11.1-201ENST00000516918 PCSK2P16519 638 aa6.3□□□□□ -1.4
SCARNA11.1-201ENST00000516918 ZNF708P17019 499 aa6.3□□□□□ -1.4
SCARNA11.1-201ENST00000516918 NAGAP17050 411 aa6.3□□□□□ -1.4
SCARNA11.1-201ENST00000516918 DPP4P27487 766 aa6.3□□□□□ -1.4
SCARNA11.1-201ENST00000516918 SRD5A2P31213 254 aa6.3□□□□□ -1.4
SCARNA11.1-201ENST00000516918 GP5P40197 560 aa6.3□□□□□ -1.4
SCARNA11.1-201ENST00000516918 ARL1P40616 181 aaPredicted RBP6.3□□□□□ -1.4
SCARNA11.1-201ENST00000516918 KIR2DL2P43627 348 aaPredicted RBP6.3□□□□□ -1.4
SCARNA11.1-201ENST00000516918 TPD52P55327 224 aaPredicted RBP6.3□□□□□ -1.4
SCARNA11.1-201ENST00000516918 GPX6P59796 221 aa6.3□□□□□ -1.4
SCARNA11.1-201ENST00000516918 HMGCS1Q01581 520 aa6.3□□□□□ -1.4
SCARNA11.1-201ENST00000516918 KRTAP1-1Q07627 177 aa6.3□□□□□ -1.4
SCARNA11.1-201ENST00000516918 MGAT2Q10469 447 aa6.3□□□□□ -1.4
SCARNA11.1-201ENST00000516918 SNTA1Q13424 505 aa6.3□□□□□ -1.4
SCARNA11.1-201ENST00000516918 TNK1Q13470 666 aa6.3□□□□□ -1.4
SCARNA11.1-201ENST00000516918 CUL3Q13618 768 aa6.3□□□□□ -1.4
SCARNA11.1-201ENST00000516918 LTB4RQ15722 352 aa6.3□□□□□ -1.4
SCARNA11.1-201ENST00000516918 ZKSCAN8Q15776 578 aaPredicted RBP6.3□□□□□ -1.4
SCARNA11.1-201ENST00000516918 PFKFB4Q16877 469 aa6.3□□□□□ -1.4
SCARNA11.1-201ENST00000516918 EXOC3L2Q2M3D2 409 aa6.3□□□□□ -1.4
SCARNA11.1-201ENST00000516918 C10orf62Q5T681 223 aaPredicted RBP6.3□□□□□ -1.4
SCARNA11.1-201ENST00000516918 GRTP1Q5TC63 336 aa6.3□□□□□ -1.4
SCARNA11.1-201ENST00000516918 LIPJQ5W064 366 aa6.3□□□□□ -1.4
SCARNA11.1-201ENST00000516918 FAM180BQ6P0A1 224 aa6.3□□□□□ -1.4
SCARNA11.1-201ENST00000516918 TMEM81Q6P7N7 255 aa6.3□□□□□ -1.4
SCARNA11.1-201ENST00000516918 SCIMPQ6UWF3 145 aa6.3□□□□□ -1.4
SCARNA11.1-201ENST00000516918 TBC1D1Q86TI0 1168 aaPredicted RBP6.3□□□□□ -1.4
SCARNA11.1-201ENST00000516918 CTAGE3PQ8IX95 158 aa6.3□□□□□ -1.4
SCARNA11.1-201ENST00000516918 PHC2Q8IXK0 858 aa6.3□□□□□ -1.4
SCARNA11.1-201ENST00000516918 ZNF610Q8N9Z0 462 aa6.3□□□□□ -1.4
SCARNA11.1-201ENST00000516918 C17orf47Q8NEP4 570 aa6.3□□□□□ -1.4
SCARNA11.1-201ENST00000516918 OR52R1Q8NGF1 315 aa6.3□□□□□ -1.4
SCARNA11.1-201ENST00000516918 TMEM171Q8WVE6 324 aa6.3□□□□□ -1.4
SCARNA11.1-201ENST00000516918 KCTD4Q8WVF5 259 aa6.3□□□□□ -1.4
SCARNA11.1-201ENST00000516918 TMBIM1Q969X1 311 aa6.3□□□□□ -1.4
SCARNA11.1-201ENST00000516918 REPS1Q96D71 796 aa6.3□□□□□ -1.4
SCARNA11.1-201ENST00000516918 ZNF845Q96IR2 970 aaPredicted RBP6.3□□□□□ -1.4
SCARNA11.1-201ENST00000516918 MARK4Q96L34 752 aa6.3□□□□□ -1.4
SCARNA11.1-201ENST00000516918 CDK15Q96Q40 435 aa6.3□□□□□ -1.4
SCARNA11.1-201ENST00000516918 FMO2Q99518 471 aa6.3□□□□□ -1.4
SCARNA11.1-201ENST00000516918 CPNE1Q99829 537 aa6.3□□□□□ -1.4
SCARNA11.1-201ENST00000516918 SLC39A3Q9BRY0 314 aa6.3□□□□□ -1.4
SCARNA11.1-201ENST00000516918 ZDHHC18Q9NUE0 388 aa6.3□□□□□ -1.4
SCARNA11.1-201ENST00000516918 ELOVL5Q9NYP7 299 aa6.3□□□□□ -1.4
SCARNA11.1-201ENST00000516918 MAT2BQ9NZL9 334 aa6.3□□□□□ -1.4
SCARNA11.1-201ENST00000516918 NFU1Q9UMS0 254 aa6.3□□□□□ -1.4
SCARNA11.1-201ENST00000516918 CFL2Q9Y281 166 aa6.3□□□□□ -1.4
SCARNA11.1-201ENST00000516918 PLLPQ9Y342 182 aa6.3□□□□□ -1.4
SCARNA11.1-201ENST00000516918 FBN1P35555 2871 aaKnown RBP6.3□□□□□ -1.4
SCARNA11.1-201ENST00000516918 CHD3Q12873 2000 aaKnown RBP6.3□□□□□ -1.4
SCARNA11.1-201ENST00000516918 A0A087X1B8 175 aa6.29□□□□□ -1.4
SCARNA11.1-201ENST00000516918 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.29□□□□□ -1.4
SCARNA11.1-201ENST00000516918 TCRBV9S1A1TA0A576 114 aa6.29□□□□□ -1.4
SCARNA11.1-201ENST00000516918 B4DXG7 233 aa6.29□□□□□ -1.4
SCARNA11.1-201ENST00000516918 RNF223E7ERA6 249 aa6.29□□□□□ -1.4
SCARNA11.1-201ENST00000516918 FOXE1O00358 373 aaPredicted RBP6.29□□□□□ -1.4
SCARNA11.1-201ENST00000516918 ACOX3O15254 700 aa6.29□□□□□ -1.4
SCARNA11.1-201ENST00000516918 SEC14L5O43304 696 aa6.29□□□□□ -1.4
SCARNA11.1-201ENST00000516918 SIX3O95343 332 aaPredicted RBP6.29□□□□□ -1.4
SCARNA11.1-201ENST00000516918 CBX7O95931 251 aa6.29□□□□□ -1.4
SCARNA11.1-201ENST00000516918 CGAP01215 116 aa6.29□□□□□ -1.4
SCARNA11.1-201ENST00000516918 CRHP06850 196 aa6.29□□□□□ -1.4
SCARNA11.1-201ENST00000516918 THBDP07204 575 aa6.29□□□□□ -1.4
SCARNA11.1-201ENST00000516918 LTA4HP09960 611 aaKnown RBP6.29□□□□□ -1.4
SCARNA11.1-201ENST00000516918 MTHFD2P13995 350 aa6.29□□□□□ -1.4
SCARNA11.1-201ENST00000516918 GFAPP14136 432 aa6.29□□□□□ -1.4
SCARNA11.1-201ENST00000516918 TBXA2RP21731 343 aa6.29□□□□□ -1.4
SCARNA11.1-201ENST00000516918 GRK2P25098 689 aa6.29□□□□□ -1.4
SCARNA11.1-201ENST00000516918 STX2P32856 288 aa6.29□□□□□ -1.4
SCARNA11.1-201ENST00000516918 SPRP35270 261 aaPredicted RBP6.29□□□□□ -1.4
SCARNA11.1-201ENST00000516918 PPICP45877 212 aa6.29□□□□□ -1.4
SCARNA11.1-201ENST00000516918 ARFIP1P53367 373 aa6.29□□□□□ -1.4
SCARNA11.1-201ENST00000516918 SUCLG1P53597 346 aaKnown RBP6.29□□□□□ -1.4
SCARNA11.1-201ENST00000516918 CLDN15P56746 228 aa6.29□□□□□ -1.4
SCARNA11.1-201ENST00000516918 B3GALT5-AS1P59052 145 aa6.29□□□□□ -1.4
SCARNA11.1-201ENST00000516918 MRPS35P82673 323 aaKnown RBP6.29□□□□□ -1.4
SCARNA11.1-201ENST00000516918 IRF9Q00978 393 aa6.29□□□□□ -1.4
SCARNA11.1-201ENST00000516918 DUSP2Q05923 314 aa6.29□□□□□ -1.4
SCARNA11.1-201ENST00000516918 DMTNQ08495 405 aa6.29□□□□□ -1.4
SCARNA11.1-201ENST00000516918 MAP4K2Q12851 820 aa6.29□□□□□ -1.4
SCARNA11.1-201ENST00000516918 GTF2H2Q13888 395 aa6.29□□□□□ -1.4
SCARNA11.1-201ENST00000516918 CAPRIN1Q14444 709 aaKnown RBP6.29□□□□□ -1.4
SCARNA11.1-201ENST00000516918 PRICKLE4Q2TBC4 344 aa6.29□□□□□ -1.4
SCARNA11.1-201ENST00000516918 TRMT12Q53H54 448 aaKnown RBP6.29□□□□□ -1.4
SCARNA11.1-201ENST00000516918 SGO1Q5FBB7 561 aa6.29□□□□□ -1.4
SCARNA11.1-201ENST00000516918 TEX35Q5T0J7 233 aa6.29□□□□□ -1.4
SCARNA11.1-201ENST00000516918 CCNYL2Q5T2Q4 361 aa6.29□□□□□ -1.4
SCARNA11.1-201ENST00000516918 FAM219BQ5XKK7 198 aa6.29□□□□□ -1.4
SCARNA11.1-201ENST00000516918 OR2A2Q6IF42 318 aa6.29□□□□□ -1.4
SCARNA11.1-201ENST00000516918 ALKBH2Q6NS38 261 aa6.29□□□□□ -1.4
SCARNA11.1-201ENST00000516918 GTF2H2CQ6P1K8 395 aa6.29□□□□□ -1.4
SCARNA11.1-201ENST00000516918 ZDHHC24Q6UX98 284 aa6.29□□□□□ -1.4
SCARNA11.1-201ENST00000516918 ZNF704Q6ZNC4 412 aaPredicted RBP6.29□□□□□ -1.4
SCARNA11.1-201ENST00000516918 GOLGA7Q7Z5G4 137 aa6.29□□□□□ -1.4
SCARNA11.1-201ENST00000516918 MEIOBQ8N635 442 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms