RNA–Protein interactions for RNA: ENST00000516462.1

RNU6-1110P-201, Transcript of RNA, U6 small nuclear 1110, pseudogene, humanhuman

BASIC

Gene RNU6-1110P, Length 101 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1110P-201ENST00000516462 PTPN6P29350 595 aa0.66□□□□□ -2.3
RNU6-1110P-201ENST00000516462 RPL4P36578 427 aaKnown RBP0.66□□□□□ -2.3
RNU6-1110P-201ENST00000516462 ELK3P41970 407 aa0.66□□□□□ -2.3
RNU6-1110P-201ENST00000516462 PTGFRP43088 359 aa0.66□□□□□ -2.3
RNU6-1110P-201ENST00000516462 OR1D4P47884 311 aa0.66□□□□□ -2.3
RNU6-1110P-201ENST00000516462 SLC7A2P52569 658 aa0.66□□□□□ -2.3
RNU6-1110P-201ENST00000516462 SSTP61278 116 aa0.66□□□□□ -2.3
RNU6-1110P-201ENST00000516462 RPS6P62753 249 aaKnown RBP0.66□□□□□ -2.3
RNU6-1110P-201ENST00000516462 TRA2BP62995 288 aaKnown RBP0.66□□□□□ -2.3
RNU6-1110P-201ENST00000516462 NOP14P78316 857 aaKnown RBP0.66□□□□□ -2.3
RNU6-1110P-201ENST00000516462 GSTO1P78417 241 aa0.66□□□□□ -2.3
RNU6-1110P-201ENST00000516462 CXCL6P80162 114 aa0.66□□□□□ -2.3
RNU6-1110P-201ENST00000516462 MRPS6P82932 125 aaKnown RBP0.66□□□□□ -2.3
RNU6-1110P-201ENST00000516462 SRYQ05066 204 aa0.66□□□□□ -2.3
RNU6-1110P-201ENST00000516462 ST3GAL3Q11203 375 aa0.66□□□□□ -2.3
RNU6-1110P-201ENST00000516462 ZP4Q12836 540 aa0.66□□□□□ -2.3
RNU6-1110P-201ENST00000516462 IL18R1Q13478 541 aa0.66□□□□□ -2.3
RNU6-1110P-201ENST00000516462 EXOSC2Q13868 293 aaKnown RBP0.66□□□□□ -2.3
RNU6-1110P-201ENST00000516462 TFDP1Q14186 410 aa0.66□□□□□ -2.3
RNU6-1110P-201ENST00000516462 DPYSL3Q14195 570 aa0.66□□□□□ -2.3
RNU6-1110P-201ENST00000516462 GAMTQ14353 236 aa0.66□□□□□ -2.3
RNU6-1110P-201ENST00000516462 PDIA5Q14554 519 aa0.66□□□□□ -2.3
RNU6-1110P-201ENST00000516462 RAB35Q15286 201 aa0.66□□□□□ -2.3
RNU6-1110P-201ENST00000516462 TRIP10Q15642 601 aa0.66□□□□□ -2.3
RNU6-1110P-201ENST00000516462 CHI3L2Q15782 390 aa0.66□□□□□ -2.3
RNU6-1110P-201ENST00000516462 UBE2V2Q15819 145 aa0.66□□□□□ -2.3
RNU6-1110P-201ENST00000516462 ZIC1Q15915 447 aa0.66□□□□□ -2.3
RNU6-1110P-201ENST00000516462 CAMK4Q16566 473 aa0.66□□□□□ -2.3
RNU6-1110P-201ENST00000516462 HAGHQ16775 308 aa0.66□□□□□ -2.3
RNU6-1110P-201ENST00000516462 PPP1R3AQ16821 1122 aa0.66□□□□□ -2.3
RNU6-1110P-201ENST00000516462 Q1RN00 199 aa0.66□□□□□ -2.3
RNU6-1110P-201ENST00000516462 KIF26BQ2KJY2 2108 aa0.66□□□□□ -2.3
RNU6-1110P-201ENST00000516462 C15orf32Q32M92 178 aa0.66□□□□□ -2.3
RNU6-1110P-201ENST00000516462 KRT71Q3SY84 523 aa0.66□□□□□ -2.3
RNU6-1110P-201ENST00000516462 TIMM50Q3ZCQ8 353 aa0.66□□□□□ -2.3
RNU6-1110P-201ENST00000516462 USH1GQ495M9 461 aa0.66□□□□□ -2.3
RNU6-1110P-201ENST00000516462 ACSF3Q4G176 576 aaPredicted RBP0.66□□□□□ -2.3
RNU6-1110P-201ENST00000516462 FAM74A3Q4VXF1 159 aa0.66□□□□□ -2.3
RNU6-1110P-201ENST00000516462 DNAJC21Q5F1R6 531 aaKnown RBP0.66□□□□□ -2.3
RNU6-1110P-201ENST00000516462 SLC25A30Q5SVS4 291 aa0.66□□□□□ -2.3
RNU6-1110P-201ENST00000516462 BEND6Q5SZJ8 279 aaPredicted RBP0.66□□□□□ -2.3
RNU6-1110P-201ENST00000516462 LCE3EQ5T5B0 92 aa0.66□□□□□ -2.3
RNU6-1110P-201ENST00000516462 IL23RQ5VWK5 629 aa0.66□□□□□ -2.3
RNU6-1110P-201ENST00000516462 SLX4IPQ5VYV7 408 aa0.66□□□□□ -2.3
RNU6-1110P-201ENST00000516462 SEL1L3Q68CR1 1132 aa0.66□□□□□ -2.3
RNU6-1110P-201ENST00000516462 REP15Q6BDI9 236 aa0.66□□□□□ -2.3
RNU6-1110P-201ENST00000516462 DMKNQ6E0U4 476 aaPredicted RBP0.66□□□□□ -2.3
RNU6-1110P-201ENST00000516462 RAET1GQ6H3X3 334 aa0.66□□□□□ -2.3
RNU6-1110P-201ENST00000516462 SPINK14Q6IE38 97 aa0.66□□□□□ -2.3
RNU6-1110P-201ENST00000516462 SULT1C3Q6IMI6 304 aa0.66□□□□□ -2.3
RNU6-1110P-201ENST00000516462 PRR5LQ6MZQ0 368 aa0.66□□□□□ -2.3
RNU6-1110P-201ENST00000516462 CGB2Q6NT52 195 aa0.66□□□□□ -2.3
RNU6-1110P-201ENST00000516462 UFSP1Q6NVU6 142 aa0.66□□□□□ -2.3
RNU6-1110P-201ENST00000516462 ZNF544Q6NX49 715 aa0.66□□□□□ -2.3
RNU6-1110P-201ENST00000516462 IRGCQ6NXR0 463 aa0.66□□□□□ -2.3
RNU6-1110P-201ENST00000516462 FAAP20Q6NZ36 180 aa0.66□□□□□ -2.3
RNU6-1110P-201ENST00000516462 NEK5Q6P3R8 708 aa0.66□□□□□ -2.3
RNU6-1110P-201ENST00000516462 ABRAXAS1Q6UWZ7 409 aa0.66□□□□□ -2.3
RNU6-1110P-201ENST00000516462 BTNL3Q6UXE8 466 aa0.66□□□□□ -2.3
RNU6-1110P-201ENST00000516462 UNC5DQ6UXZ4 953 aa0.66□□□□□ -2.3
RNU6-1110P-201ENST00000516462 ZNF600Q6ZNG1 722 aa0.66□□□□□ -2.3
RNU6-1110P-201ENST00000516462 GET4Q7L5D6 327 aaPredicted RBP0.66□□□□□ -2.3
RNU6-1110P-201ENST00000516462 LPCAT2Q7L5N7 544 aa0.66□□□□□ -2.3
RNU6-1110P-201ENST00000516462 MIER3Q7Z3K6 550 aa0.66□□□□□ -2.3
RNU6-1110P-201ENST00000516462 TSEN54Q7Z6J9 526 aaKnown RBP0.66□□□□□ -2.3
RNU6-1110P-201ENST00000516462 LHFPL4Q7Z7J7 247 aa0.66□□□□□ -2.3
RNU6-1110P-201ENST00000516462 SYVN1Q86TM6 617 aa0.66□□□□□ -2.3
RNU6-1110P-201ENST00000516462 ZSCAN30Q86W11 494 aa0.66□□□□□ -2.3
RNU6-1110P-201ENST00000516462 GPBP1Q86WP2 473 aa0.66□□□□□ -2.3
RNU6-1110P-201ENST00000516462 CDC20BQ86Y33 519 aa0.66□□□□□ -2.3
RNU6-1110P-201ENST00000516462 LRRC49Q8IUZ0 686 aa0.66□□□□□ -2.3
RNU6-1110P-201ENST00000516462 C11orf53Q8IXP5 236 aa0.66□□□□□ -2.3
RNU6-1110P-201ENST00000516462 CCDC36Q8IYA8 594 aa0.66□□□□□ -2.3
RNU6-1110P-201ENST00000516462 GPR65Q8IYL9 337 aa0.66□□□□□ -2.3
RNU6-1110P-201ENST00000516462 CEND1Q8N111 149 aa0.66□□□□□ -2.3
RNU6-1110P-201ENST00000516462 CENPSQ8N2Z9 138 aa0.66□□□□□ -2.3
RNU6-1110P-201ENST00000516462 KDM8Q8N371 416 aa0.66□□□□□ -2.3
RNU6-1110P-201ENST00000516462 SPEM1Q8N4L4 309 aa0.66□□□□□ -2.3
RNU6-1110P-201ENST00000516462 C11orf42Q8N5U0 333 aa0.66□□□□□ -2.3
RNU6-1110P-201ENST00000516462 LINC00612Q8N6U2 182 aa0.66□□□□□ -2.3
RNU6-1110P-201ENST00000516462 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP0.66□□□□□ -2.3
RNU6-1110P-201ENST00000516462 MRPL43Q8N983 215 aaKnown RBP0.66□□□□□ -2.3
RNU6-1110P-201ENST00000516462 LEMD2Q8NC56 503 aa0.66□□□□□ -2.3
RNU6-1110P-201ENST00000516462 ZBTB44Q8NCP5 570 aa0.66□□□□□ -2.3
RNU6-1110P-201ENST00000516462 CNNM3Q8NE01 707 aa0.66□□□□□ -2.3
RNU6-1110P-201ENST00000516462 NFAM1Q8NET5 270 aaPredicted RBP0.66□□□□□ -2.3
RNU6-1110P-201ENST00000516462 OR2T33Q8NG76 320 aa0.66□□□□□ -2.3
RNU6-1110P-201ENST00000516462 OR56B1Q8NGI3 324 aa0.66□□□□□ -2.3
RNU6-1110P-201ENST00000516462 OR2L2Q8NH16 312 aa0.66□□□□□ -2.3
RNU6-1110P-201ENST00000516462 RHOXF1Q8NHV9 184 aa0.66□□□□□ -2.3
RNU6-1110P-201ENST00000516462 CNIH3Q8TBE1 160 aa0.66□□□□□ -2.3
RNU6-1110P-201ENST00000516462 M1APQ8TC57 530 aa0.66□□□□□ -2.3
RNU6-1110P-201ENST00000516462 FNDC8Q8TC99 324 aa0.66□□□□□ -2.3
RNU6-1110P-201ENST00000516462 DQX1Q8TE96 717 aaKnown RBP0.66□□□□□ -2.3
RNU6-1110P-201ENST00000516462 TBCKQ8TEA7 893 aa0.66□□□□□ -2.3
RNU6-1110P-201ENST00000516462 AGAP11Q8TF27 550 aa0.66□□□□□ -2.3
RNU6-1110P-201ENST00000516462 FCGR1BQ92637 280 aa0.66□□□□□ -2.3
RNU6-1110P-201ENST00000516462 RPL3LQ92901 407 aaKnown RBP0.66□□□□□ -2.3
RNU6-1110P-201ENST00000516462 CCDC47Q96A33 483 aaKnown RBP0.66□□□□□ -2.3
RNU6-1110P-201ENST00000516462 SLC25A36Q96CQ1 311 aa0.66□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms