RNA–Protein interactions for RNA: ENST00000515397.1

VCAN-212, Transcript of versican, humanhuman

TSL 2

Gene VCAN, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-212ENST00000515397 ART3Q13508 389 aa10.51□□□□□ -0.73
VCAN-212ENST00000515397 WIPI1Q5MNZ9 446 aaPredicted RBP10.51□□□□□ -0.73
VCAN-212ENST00000515397 MTFR2Q6P444 385 aa10.51□□□□□ -0.73
VCAN-212ENST00000515397 RPTNQ6XPR3 784 aa10.51□□□□□ -0.73
VCAN-212ENST00000515397 LARP4Q71RC2 724 aaKnown RBP eCLIP10.51□□□□□ -0.73
VCAN-212ENST00000515397 NUP54Q7Z3B4 507 aa10.51□□□□□ -0.73
VCAN-212ENST00000515397 GALNT10Q86SR1 603 aa10.51□□□□□ -0.73
VCAN-212ENST00000515397 PACS2Q86VP3 889 aa10.51□□□□□ -0.73
VCAN-212ENST00000515397 DND1Q8IYX4 353 aaKnown RBP10.51□□□□□ -0.73
VCAN-212ENST00000515397 SAMD14Q8IZD0 417 aaPredicted RBP10.51□□□□□ -0.73
VCAN-212ENST00000515397 SLC34A3Q8N130 599 aa10.51□□□□□ -0.73
VCAN-212ENST00000515397 LIX1Q8N485 282 aa10.51□□□□□ -0.73
VCAN-212ENST00000515397 KRTCAP2Q8N6L1 136 aa10.51□□□□□ -0.73
VCAN-212ENST00000515397 ZNF781Q8N8C0 355 aa10.51□□□□□ -0.73
VCAN-212ENST00000515397 C17orf47Q8NEP4 570 aa10.51□□□□□ -0.73
VCAN-212ENST00000515397 OR7A2PQ8NGA2 310 aa10.51□□□□□ -0.73
VCAN-212ENST00000515397 OR10Q1Q8NGQ4 319 aa10.51□□□□□ -0.73
VCAN-212ENST00000515397 FBXO30Q8TB52 745 aa10.51□□□□□ -0.73
VCAN-212ENST00000515397 MGARPQ8TDB4 240 aa10.51□□□□□ -0.73
VCAN-212ENST00000515397 OTUB1Q96FW1 271 aaPredicted RBP10.51□□□□□ -0.73
VCAN-212ENST00000515397 FCRL1Q96LA6 429 aa10.51□□□□□ -0.73
VCAN-212ENST00000515397 ZNF597Q96LX8 424 aa10.51□□□□□ -0.73
VCAN-212ENST00000515397 COL21A1Q96P44 957 aa10.51□□□□□ -0.73
VCAN-212ENST00000515397 REEP4Q9H6H4 257 aa10.51□□□□□ -0.73
VCAN-212ENST00000515397 SERHLQ9NQF3 203 aa10.51□□□□□ -0.73
VCAN-212ENST00000515397 TAS2R7Q9NYW3 318 aa10.51□□□□□ -0.73
VCAN-212ENST00000515397 KLRF1Q9NZS2 232 aa10.51□□□□□ -0.73
VCAN-212ENST00000515397 OR10H1Q9Y4A9 318 aa10.51□□□□□ -0.73
VCAN-212ENST00000515397 C15orf38-AP3S2A0A0A6YYH1 394 aa10.5□□□□□ -0.73
VCAN-212ENST00000515397 A0A1B0GVC2 190 aa10.5□□□□□ -0.73
VCAN-212ENST00000515397 GXYLT2A0PJZ3 443 aa10.5□□□□□ -0.73
VCAN-212ENST00000515397 PRAMEF25A6NGN4 478 aa10.5□□□□□ -0.73
VCAN-212ENST00000515397 AQP7O14520 342 aa10.5□□□□□ -0.73
VCAN-212ENST00000515397 TO15178 435 aa10.5□□□□□ -0.73
VCAN-212ENST00000515397 ACOX3O15254 700 aa10.5□□□□□ -0.73
VCAN-212ENST00000515397 PDPK1O15530 556 aa10.5□□□□□ -0.73
VCAN-212ENST00000515397 BCAS2O75934 225 aaPredicted RBP10.5□□□□□ -0.73
VCAN-212ENST00000515397 NEFHP12036 1026 aa10.5□□□□□ -0.73
VCAN-212ENST00000515397 NAGAP17050 411 aa10.5□□□□□ -0.73
VCAN-212ENST00000515397 GPC1P35052 558 aa10.5□□□□□ -0.73
VCAN-212ENST00000515397 KIR3DL1P43629 444 aa10.5□□□□□ -0.73
VCAN-212ENST00000515397 GSTM5P46439 218 aa10.5□□□□□ -0.73
VCAN-212ENST00000515397 TMED10P49755 219 aaKnown RBP10.5□□□□□ -0.73
VCAN-212ENST00000515397 MANFP55145 182 aaKnown RBP10.5□□□□□ -0.73
VCAN-212ENST00000515397 ABCE1P61221 599 aaKnown RBP10.5□□□□□ -0.73
VCAN-212ENST00000515397 DCAF7P61962 342 aa10.5□□□□□ -0.73
VCAN-212ENST00000515397 PSG6Q00889 435 aa10.5□□□□□ -0.73
VCAN-212ENST00000515397 PTGR1Q14914 329 aa10.5□□□□□ -0.73
VCAN-212ENST00000515397 PDCD2Q16342 344 aaPredicted RBP10.5□□□□□ -0.73
VCAN-212ENST00000515397 XKR7Q5GH72 579 aa10.5□□□□□ -0.73
VCAN-212ENST00000515397 TNFAIP8L3Q5GJ75 292 aa10.5□□□□□ -0.73
VCAN-212ENST00000515397 C6orf136Q5SQH8 315 aa10.5□□□□□ -0.73
VCAN-212ENST00000515397 IL23RQ5VWK5 629 aa10.5□□□□□ -0.73
VCAN-212ENST00000515397 TIGD3Q6B0B8 471 aa10.5□□□□□ -0.73
VCAN-212ENST00000515397 RTL6Q6ICC9 239 aa10.5□□□□□ -0.73
VCAN-212ENST00000515397 XKRXQ6PP77 449 aa10.5□□□□□ -0.73
VCAN-212ENST00000515397 SZRD1Q7Z422 152 aa10.5□□□□□ -0.73
VCAN-212ENST00000515397 FNDC5Q8NAU1 212 aa10.5□□□□□ -0.73
VCAN-212ENST00000515397 OR1J4Q8NGS1 313 aa10.5□□□□□ -0.73
VCAN-212ENST00000515397 NEIL3Q8TAT5 605 aa10.5□□□□□ -0.73
VCAN-212ENST00000515397 PPCDCQ96CD2 204 aa10.5□□□□□ -0.73
VCAN-212ENST00000515397 TUBGCP3Q96CW5 907 aa10.5□□□□□ -0.73
VCAN-212ENST00000515397 C16orf58Q96GQ5 468 aa10.5□□□□□ -0.73
VCAN-212ENST00000515397 BTBD9Q96Q07 612 aa10.5□□□□□ -0.73
VCAN-212ENST00000515397 CCT7Q99832 543 aa10.5□□□□□ -0.73
VCAN-212ENST00000515397 YIPF4Q9BSR8 244 aa10.5□□□□□ -0.73
VCAN-212ENST00000515397 DDX18Q9NVP1 670 aaKnown RBP10.5□□□□□ -0.73
VCAN-212ENST00000515397 TAS2R9Q9NYW1 312 aa10.5□□□□□ -0.73
VCAN-212ENST00000515397 C19orf53Q9UNZ5 99 aaPredicted RBP10.5□□□□□ -0.73
VCAN-212ENST00000515397 RNF6Q9Y252 685 aa10.5□□□□□ -0.73
VCAN-212ENST00000515397 FAM215AQ9Y5M1 114 aa10.5□□□□□ -0.73
VCAN-212ENST00000515397 NKX2-6A6NCS4 301 aa10.49□□□□□ -0.73
VCAN-212ENST00000515397 FAM90A27PA6NNH2 459 aa10.49□□□□□ -0.73
VCAN-212ENST00000515397 B4DXG7 233 aa10.49□□□□□ -0.73
VCAN-212ENST00000515397 NPIPB8E9PQR5 432 aa10.49□□□□□ -0.73
VCAN-212ENST00000515397 GMFGO60234 142 aa10.49□□□□□ -0.73
VCAN-212ENST00000515397 SUSD5O60279 629 aa10.49□□□□□ -0.73
VCAN-212ENST00000515397 TSPAN2O60636 221 aa10.49□□□□□ -0.73
VCAN-212ENST00000515397 HCN1O60741 890 aa10.49□□□□□ -0.73
VCAN-212ENST00000515397 SNX4O95219 450 aa10.49□□□□□ -0.73
VCAN-212ENST00000515397 CLDN14O95500 239 aa10.49□□□□□ -0.73
VCAN-212ENST00000515397 SERPINE1P05121 402 aa10.49□□□□□ -0.73
VCAN-212ENST00000515397 DHRS4L1P0CG22 281 aa10.49□□□□□ -0.73
VCAN-212ENST00000515397 GLI4P10075 376 aa10.49□□□□□ -0.73
VCAN-212ENST00000515397 LAMP1P11279 417 aa10.49□□□□□ -0.73
VCAN-212ENST00000515397 CYP4B1P13584 511 aa10.49□□□□□ -0.73
VCAN-212ENST00000515397 ACVR2AP27037 513 aa10.49□□□□□ -0.73
VCAN-212ENST00000515397 PTPN6P29350 595 aa10.49□□□□□ -0.73
VCAN-212ENST00000515397 IL12BP29460 328 aa10.49□□□□□ -0.73
VCAN-212ENST00000515397 GABRA3P34903 492 aa10.49□□□□□ -0.73
VCAN-212ENST00000515397 KRT20P35900 424 aa10.49□□□□□ -0.73
VCAN-212ENST00000515397 SLC1A6P48664 564 aa10.49□□□□□ -0.73
VCAN-212ENST00000515397 RPP38P78345 283 aaKnown RBP10.49□□□□□ -0.73
VCAN-212ENST00000515397 ZNF630Q2M218 657 aaPredicted RBP10.49□□□□□ -0.73
VCAN-212ENST00000515397 ATP6AP1LQ52LC2 224 aa10.49□□□□□ -0.73
VCAN-212ENST00000515397 BEND6Q5SZJ8 279 aaPredicted RBP10.49□□□□□ -0.73
VCAN-212ENST00000515397 DCST1Q5T197 706 aa10.49□□□□□ -0.73
VCAN-212ENST00000515397 WLSQ5T9L3 541 aa10.49□□□□□ -0.73
VCAN-212ENST00000515397 PLXDC2Q6UX71 529 aa10.49□□□□□ -0.73
VCAN-212ENST00000515397 IKBIPQ70UQ0 350 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms