RNA–Protein interactions for RNA: ENST00000515385.1

SMAD1-215, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMAD1, Length 2,085 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-215ENST00000515385 SYPP08247 313 aa12.09□□□□□ -0.47
SMAD1-215ENST00000515385 ANXA4P09525 319 aaPredicted RBP12.09□□□□□ -0.47
SMAD1-215ENST00000515385 CPN1P15169 458 aa12.09□□□□□ -0.47
SMAD1-215ENST00000515385 GSTM3P21266 225 aa12.09□□□□□ -0.47
SMAD1-215ENST00000515385 KCNJ5P48544 419 aa12.09□□□□□ -0.47
SMAD1-215ENST00000515385 RNF144AP50876 292 aaPredicted RBP12.09□□□□□ -0.47
SMAD1-215ENST00000515385 LIM2P55344 173 aa12.09□□□□□ -0.47
SMAD1-215ENST00000515385 MAZP56270 477 aaKnown RBP12.09□□□□□ -0.47
SMAD1-215ENST00000515385 GK2Q14410 553 aaPredicted RBP12.09□□□□□ -0.47
SMAD1-215ENST00000515385 HLXQ14774 488 aaPredicted RBP12.09□□□□□ -0.47
SMAD1-215ENST00000515385 REEP3Q6NUK4 255 aa12.09□□□□□ -0.47
SMAD1-215ENST00000515385 BEND4Q6ZU67 534 aa12.09□□□□□ -0.47
SMAD1-215ENST00000515385 RAB11FIP2Q7L804 512 aa12.09□□□□□ -0.47
SMAD1-215ENST00000515385 CIR1Q86X95 450 aaPredicted RBP12.09□□□□□ -0.47
SMAD1-215ENST00000515385 LRRC56Q8IYG6 542 aaPredicted RBP12.09□□□□□ -0.47
SMAD1-215ENST00000515385 SAMD12Q8N8I0 201 aa12.09□□□□□ -0.47
SMAD1-215ENST00000515385 NSMAFQ92636 917 aa12.09□□□□□ -0.47
SMAD1-215ENST00000515385 C10orf90Q96M02 699 aa12.09□□□□□ -0.47
SMAD1-215ENST00000515385 ABHD1Q96SE0 405 aa12.09□□□□□ -0.47
SMAD1-215ENST00000515385 SLC12A9Q9BXP2 914 aa12.09□□□□□ -0.47
SMAD1-215ENST00000515385 GPR63Q9BZJ6 419 aa12.09□□□□□ -0.47
SMAD1-215ENST00000515385 SAP130Q9H0E3 1048 aa12.09□□□□□ -0.47
SMAD1-215ENST00000515385 CDCP1Q9H5V8 836 aa12.09□□□□□ -0.47
SMAD1-215ENST00000515385 MED11Q9P086 117 aa12.09□□□□□ -0.47
SMAD1-215ENST00000515385 EPHA6Q9UF33 1036 aa12.09□□□□□ -0.47
SMAD1-215ENST00000515385 ZFR2Q9UPR6 939 aaKnown RBP12.09□□□□□ -0.47
SMAD1-215ENST00000515385 MBLAC1A4D2B0 266 aaPredicted RBP12.09□□□□□ -0.47
SMAD1-215ENST00000515385 ARHGEF33A8MVX0 844 aa12.09□□□□□ -0.47
SMAD1-215ENST00000515385 FAM227AF5H4B4 570 aa12.09□□□□□ -0.47
SMAD1-215ENST00000515385 RASGRP1O95267 797 aa12.09□□□□□ -0.47
SMAD1-215ENST00000515385 F11P03951 625 aa12.09□□□□□ -0.47
SMAD1-215ENST00000515385 CELP19835 753 aa12.09□□□□□ -0.47
SMAD1-215ENST00000515385 SRP9P49458 86 aaKnown RBP12.09□□□□□ -0.47
SMAD1-215ENST00000515385 RAB13P51153 203 aa12.09□□□□□ -0.47
SMAD1-215ENST00000515385 DSC1Q08554 894 aa12.09□□□□□ -0.47
SMAD1-215ENST00000515385 CHIT1Q13231 466 aa12.09□□□□□ -0.47
SMAD1-215ENST00000515385 SNTB2Q13425 540 aaKnown RBP12.09□□□□□ -0.47
SMAD1-215ENST00000515385 PUM1Q14671 1186 aaKnown RBP eCLIP12.09□□□□□ -0.47
SMAD1-215ENST00000515385 ATRAIDQ6UW56 229 aa12.09□□□□□ -0.47
SMAD1-215ENST00000515385 DEF8Q6ZN54 512 aa12.09□□□□□ -0.47
SMAD1-215ENST00000515385 JAZF1Q86VZ6 243 aa12.09□□□□□ -0.47
SMAD1-215ENST00000515385 NKAIN4Q8IVV8 208 aa12.09□□□□□ -0.47
SMAD1-215ENST00000515385 ZNF527Q8NB42 609 aa12.09□□□□□ -0.47
SMAD1-215ENST00000515385 POGLUT1Q8NBL1 392 aa12.09□□□□□ -0.47
SMAD1-215ENST00000515385 FBXO15Q8NCQ5 510 aaPredicted RBP12.09□□□□□ -0.47
SMAD1-215ENST00000515385 WDR20Q8TBZ3 569 aa12.09□□□□□ -0.47
SMAD1-215ENST00000515385 RFKQ969G6 155 aa12.09□□□□□ -0.47
SMAD1-215ENST00000515385 LRRC46Q96FV0 321 aa12.09□□□□□ -0.47
SMAD1-215ENST00000515385 MS4A3Q96HJ5 214 aa12.09□□□□□ -0.47
SMAD1-215ENST00000515385 FUZQ9BT04 418 aa12.09□□□□□ -0.47
SMAD1-215ENST00000515385 WRAP53Q9BUR4 548 aaKnown RBP12.09□□□□□ -0.47
SMAD1-215ENST00000515385 NKX6-2Q9C056 277 aaPredicted RBP12.09□□□□□ -0.47
SMAD1-215ENST00000515385 C20orf85Q9H1P6 137 aa12.09□□□□□ -0.47
SMAD1-215ENST00000515385 OR6C2Q9NZP2 312 aa12.09□□□□□ -0.47
SMAD1-215ENST00000515385 PLCL2Q9UPR0 1127 aa12.09□□□□□ -0.47
SMAD1-215ENST00000515385 CA5BQ9Y2D0 317 aa12.09□□□□□ -0.47
SMAD1-215ENST00000515385 SLC45A1Q9Y2W3 748 aa12.09□□□□□ -0.47
SMAD1-215ENST00000515385 PCDHGC4Q9Y5F7 938 aa12.09□□□□□ -0.47
SMAD1-215ENST00000515385 TRBV5-4A0A0C4DH59 114 aa12.08□□□□□ -0.48
SMAD1-215ENST00000515385 NAP1L6A6NFF2 107 aa12.08□□□□□ -0.48
SMAD1-215ENST00000515385 AGAP14A8MT82 685 aa12.08□□□□□ -0.48
SMAD1-215ENST00000515385 LINC00587B1AMM8 73 aa12.08□□□□□ -0.48
SMAD1-215ENST00000515385 KDM4EB2RXH2 506 aaPredicted RBP12.08□□□□□ -0.48
SMAD1-215ENST00000515385 LRRN3E7EW58 273 aa12.08□□□□□ -0.48
SMAD1-215ENST00000515385 SLC16A5O15375 505 aa12.08□□□□□ -0.48
SMAD1-215ENST00000515385 LRRTM2O43300 516 aa12.08□□□□□ -0.48
SMAD1-215ENST00000515385 FZD7O75084 574 aa12.08□□□□□ -0.48
SMAD1-215ENST00000515385 AQP8O94778 261 aa12.08□□□□□ -0.48
SMAD1-215ENST00000515385 CD53P19397 219 aa12.08□□□□□ -0.48
SMAD1-215ENST00000515385 ACRV1P26436 265 aa12.08□□□□□ -0.48
SMAD1-215ENST00000515385 CRYBB1P53674 252 aaPredicted RBP12.08□□□□□ -0.48
SMAD1-215ENST00000515385 KIAA1024LP59773 190 aa12.08□□□□□ -0.48
SMAD1-215ENST00000515385 HBA1P69905 142 aa12.08□□□□□ -0.48
SMAD1-215ENST00000515385 EFEMP1Q12805 493 aa12.08□□□□□ -0.48
SMAD1-215ENST00000515385 ZSWIM7Q19AV6 140 aa12.08□□□□□ -0.48
SMAD1-215ENST00000515385 CCDC157Q569K6 752 aa12.08□□□□□ -0.48
SMAD1-215ENST00000515385 KIAA1161Q6NSJ0 714 aa12.08□□□□□ -0.48
SMAD1-215ENST00000515385 UBE2R2Q712K3 238 aaPredicted RBP12.08□□□□□ -0.48
SMAD1-215ENST00000515385 MRGPREQ86SM8 312 aa12.08□□□□□ -0.48
SMAD1-215ENST00000515385 TMEM17Q86X19 198 aa12.08□□□□□ -0.48
SMAD1-215ENST00000515385 STX12Q86Y82 276 aa12.08□□□□□ -0.48
SMAD1-215ENST00000515385 APOBEC3FQ8IUX4 373 aaKnown RBP12.08□□□□□ -0.48
SMAD1-215ENST00000515385 OR6V1Q8N148 313 aa12.08□□□□□ -0.48
SMAD1-215ENST00000515385 IQCF1Q8N6M8 205 aa12.08□□□□□ -0.48
SMAD1-215ENST00000515385 ZFP41Q8N8Y5 198 aa12.08□□□□□ -0.48
SMAD1-215ENST00000515385 FBXO22Q8NEZ5 403 aa12.08□□□□□ -0.48
SMAD1-215ENST00000515385 OR1S1Q8NH92 325 aa12.08□□□□□ -0.48
SMAD1-215ENST00000515385 GANCQ8TET4 914 aa12.08□□□□□ -0.48
SMAD1-215ENST00000515385 TMEM40Q8WWA1 233 aa12.08□□□□□ -0.48
SMAD1-215ENST00000515385 SMIM14Q96QK8 99 aa12.08□□□□□ -0.48
SMAD1-215ENST00000515385 FAIM2Q9BWQ8 316 aa12.08□□□□□ -0.48
SMAD1-215ENST00000515385 BOCQ9BWV1 1114 aa12.08□□□□□ -0.48
SMAD1-215ENST00000515385 JAM3Q9BX67 310 aa12.08□□□□□ -0.48
SMAD1-215ENST00000515385 SLC25A32Q9H2D1 315 aa12.08□□□□□ -0.48
SMAD1-215ENST00000515385 LRRN3Q9H3W5 708 aa12.08□□□□□ -0.48
SMAD1-215ENST00000515385 MTG2Q9H4K7 406 aa12.08□□□□□ -0.48
SMAD1-215ENST00000515385 REEP4Q9H6H4 257 aa12.08□□□□□ -0.48
SMAD1-215ENST00000515385 EVA1AQ9H8M9 152 aa12.08□□□□□ -0.48
SMAD1-215ENST00000515385 NANSQ9NR45 359 aa12.08□□□□□ -0.48
SMAD1-215ENST00000515385 POLE3Q9NRF9 147 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms