RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 OR51I1Q9H343 314 aa19.41■□□□□ 0.7
LSM6-207ENST00000515311 Q9N2J8 555 aa19.41■□□□□ 0.7
LSM6-207ENST00000515311 ZMIZ1Q9ULJ6 1067 aa19.41■□□□□ 0.7
LSM6-207ENST00000515311 AP3M1Q9Y2T2 418 aa19.41■□□□□ 0.7
LSM6-207ENST00000515311 PCDHGB3Q9Y5G1 929 aa19.41■□□□□ 0.7
LSM6-207ENST00000515311 ATP5HO75947 161 aa19.4■□□□□ 0.7
LSM6-207ENST00000515311 ITGB2P05107 769 aa19.4■□□□□ 0.7
LSM6-207ENST00000515311 GABRA3P34903 492 aa19.4■□□□□ 0.7
LSM6-207ENST00000515311 SOX11P35716 441 aa19.4■□□□□ 0.7
LSM6-207ENST00000515311 CPOXP36551 454 aa19.4■□□□□ 0.7
LSM6-207ENST00000515311 CRATP43155 626 aa19.4■□□□□ 0.7
LSM6-207ENST00000515311 NR0B1P51843 470 aaKnown RBP19.4■□□□□ 0.7
LSM6-207ENST00000515311 PSME3P61289 254 aa19.4■□□□□ 0.7
LSM6-207ENST00000515311 MEP1AQ16819 746 aa19.4■□□□□ 0.7
LSM6-207ENST00000515311 CYP27C1Q4G0S4 372 aa19.4■□□□□ 0.7
LSM6-207ENST00000515311 PIGGQ5H8A4 983 aa19.4■□□□□ 0.7
LSM6-207ENST00000515311 RABL3Q5HYI8 236 aa19.4■□□□□ 0.7
LSM6-207ENST00000515311 ACER2Q5QJU3 275 aa19.4■□□□□ 0.7
LSM6-207ENST00000515311 TNFAIP8L2Q6P589 184 aaPredicted RBP19.4■□□□□ 0.7
LSM6-207ENST00000515311 C16orf89Q6UX73 402 aa19.4■□□□□ 0.7
LSM6-207ENST00000515311 PGAM4Q8N0Y7 254 aa19.4■□□□□ 0.7
LSM6-207ENST00000515311 TAGAPQ8N103 731 aa19.4■□□□□ 0.7
LSM6-207ENST00000515311 SIRT6Q8N6T7 355 aa19.4■□□□□ 0.7
LSM6-207ENST00000515311 HORMAD2Q8N7B1 307 aa19.4■□□□□ 0.7
LSM6-207ENST00000515311 OR5D16Q8NGK9 328 aa19.4■□□□□ 0.7
LSM6-207ENST00000515311 FBXO30Q8TB52 745 aa19.4■□□□□ 0.7
LSM6-207ENST00000515311 SLC22A8Q8TCC7 542 aa19.4■□□□□ 0.7
LSM6-207ENST00000515311 GPR151Q8TDV0 419 aa19.4■□□□□ 0.7
LSM6-207ENST00000515311 BTBD2Q9BX70 525 aa19.4■□□□□ 0.7
LSM6-207ENST00000515311 KAT8Q9H7Z6 458 aaKnown RBP19.4■□□□□ 0.7
LSM6-207ENST00000515311 SPAG4Q9NPE6 437 aa19.4■□□□□ 0.7
LSM6-207ENST00000515311 GPR83Q9NYM4 423 aa19.4■□□□□ 0.7
LSM6-207ENST00000515311 YARS2Q9Y2Z4 477 aaKnown RBP19.4■□□□□ 0.7
LSM6-207ENST00000515311 EXPH5Q8NEV8 1989 aa19.39■□□□□ 0.7
LSM6-207ENST00000515311 WWP2O00308 870 aa19.39■□□□□ 0.69
LSM6-207ENST00000515311 HMGN4O00479 90 aa19.39■□□□□ 0.69
LSM6-207ENST00000515311 CDK2AP1O14519 115 aa19.39■□□□□ 0.69
LSM6-207ENST00000515311 ITGA10O75578 1167 aa19.39■□□□□ 0.69
LSM6-207ENST00000515311 OR2J2O76002 312 aa19.39■□□□□ 0.69
LSM6-207ENST00000515311 ETFAP13804 333 aa19.39■□□□□ 0.69
LSM6-207ENST00000515311 TRHRP34981 398 aaPredicted RBP19.39■□□□□ 0.69
LSM6-207ENST00000515311 CCL11P51671 97 aa19.39■□□□□ 0.69
LSM6-207ENST00000515311 CASP9P55211 416 aa19.39■□□□□ 0.69
LSM6-207ENST00000515311 NRG3P56975 720 aa19.39■□□□□ 0.69
LSM6-207ENST00000515311 SELPLGQ14242 412 aa19.39■□□□□ 0.69
LSM6-207ENST00000515311 NNATQ16517 81 aa19.39■□□□□ 0.69
LSM6-207ENST00000515311 AGAP7PQ5VUJ5 663 aa19.39■□□□□ 0.69
LSM6-207ENST00000515311 COX18Q8N8Q8 333 aa19.39■□□□□ 0.69
LSM6-207ENST00000515311 RBM15BQ8NDT2 890 aaKnown RBP19.39■□□□□ 0.69
LSM6-207ENST00000515311 CDS1Q92903 461 aa19.39■□□□□ 0.69
LSM6-207ENST00000515311 TMEM125Q96AQ2 219 aa19.39■□□□□ 0.69
LSM6-207ENST00000515311 SLC35A4Q96G79 324 aa19.39■□□□□ 0.69
LSM6-207ENST00000515311 AGAP4Q96P64 663 aa19.39■□□□□ 0.69
LSM6-207ENST00000515311 SPATA9Q9BWV2 254 aa19.39■□□□□ 0.69
LSM6-207ENST00000515311 TRIM8Q9BZR9 551 aa19.39■□□□□ 0.69
LSM6-207ENST00000515311 CDCP1Q9H5V8 836 aa19.39■□□□□ 0.69
LSM6-207ENST00000515311 LIN28AQ9H9Z2 209 aaKnown RBP19.39■□□□□ 0.69
LSM6-207ENST00000515311 EXD2Q9NVH0 621 aa19.39■□□□□ 0.69
LSM6-207ENST00000515311 OR10H1Q9Y4A9 318 aa19.39■□□□□ 0.69
LSM6-207ENST00000515311 LOC400499M0QZD8 3231 aa19.39■□□□□ 0.69
LSM6-207ENST00000515311 A6NL46 340 aa19.38■□□□□ 0.69
LSM6-207ENST00000515311 ZZEF1O43149 2961 aa19.38■□□□□ 0.69
LSM6-207ENST00000515311 TNFRSF21O75509 655 aa19.38■□□□□ 0.69
LSM6-207ENST00000515311 NADKO95544 446 aaPredicted RBP19.38■□□□□ 0.69
LSM6-207ENST00000515311 AK1P00568 194 aa19.38■□□□□ 0.69
LSM6-207ENST00000515311 TPRP12270 2363 aaKnown RBP19.38■□□□□ 0.69
LSM6-207ENST00000515311 PIGAP37287 484 aa19.38■□□□□ 0.69
LSM6-207ENST00000515311 DSTNP60981 165 aa19.38■□□□□ 0.69
LSM6-207ENST00000515311 SLC25A3Q00325 362 aa19.38■□□□□ 0.69
LSM6-207ENST00000515311 ATAD3BQ5T9A4 648 aa19.38■□□□□ 0.69
LSM6-207ENST00000515311 ABHD17BQ5VST6 288 aa19.38■□□□□ 0.69
LSM6-207ENST00000515311 B3GNTL1Q67FW5 361 aaPredicted RBP19.38■□□□□ 0.69
LSM6-207ENST00000515311 FCRLBQ6BAA4 426 aa19.38■□□□□ 0.69
LSM6-207ENST00000515311 HEPHL1Q6MZM0 1159 aa19.38■□□□□ 0.69
LSM6-207ENST00000515311 C16orf47Q6ZP98 133 aaPredicted RBP19.38■□□□□ 0.69
LSM6-207ENST00000515311 RINLQ6ZS11 566 aa19.38■□□□□ 0.69
LSM6-207ENST00000515311 SERPINA11Q86U17 422 aa19.38■□□□□ 0.69
LSM6-207ENST00000515311 SLC15A3Q8IY34 581 aa19.38■□□□□ 0.69
LSM6-207ENST00000515311 OTUB1Q96FW1 271 aaPredicted RBP19.38■□□□□ 0.69
LSM6-207ENST00000515311 RASL10BQ96S79 203 aa19.38■□□□□ 0.69
LSM6-207ENST00000515311 ABCD2Q9UBJ2 740 aa19.38■□□□□ 0.69
LSM6-207ENST00000515311 LIPT1Q9Y234 373 aa19.38■□□□□ 0.69
LSM6-207ENST00000515311 L3MBTL1Q9Y468 752 aa19.38■□□□□ 0.69
LSM6-207ENST00000515311 A8MVJ9 347 aa19.37■□□□□ 0.69
LSM6-207ENST00000515311 ALPPP05187 535 aa19.37■□□□□ 0.69
LSM6-207ENST00000515311 OR12D1P0DN82 309 aa19.37■□□□□ 0.69
LSM6-207ENST00000515311 NAGAP17050 411 aa19.37■□□□□ 0.69
LSM6-207ENST00000515311 ABCD3P28288 659 aa19.37■□□□□ 0.69
LSM6-207ENST00000515311 RASSF2P50749 326 aa19.37■□□□□ 0.69
LSM6-207ENST00000515311 SLC7A2P52569 658 aa19.37■□□□□ 0.69
LSM6-207ENST00000515311 POU6F2P78424 691 aaPredicted RBP19.37■□□□□ 0.69
LSM6-207ENST00000515311 MRPS22P82650 360 aaKnown RBP19.37■□□□□ 0.69
LSM6-207ENST00000515311 TBR1Q16650 682 aa19.37■□□□□ 0.69
LSM6-207ENST00000515311 ISLR2Q6UXK2 745 aa19.37■□□□□ 0.69
LSM6-207ENST00000515311 CCDC121Q6ZUS5 278 aa19.37■□□□□ 0.69
LSM6-207ENST00000515311 NET1Q7Z628 596 aaPredicted RBP19.37■□□□□ 0.69
LSM6-207ENST00000515311 DND1Q8IYX4 353 aaKnown RBP19.37■□□□□ 0.69
LSM6-207ENST00000515311 SLC34A3Q8N130 599 aa19.37■□□□□ 0.69
LSM6-207ENST00000515311 C10orf111Q8N326 155 aa19.37■□□□□ 0.69
LSM6-207ENST00000515311 CHDHQ8NE62 594 aaPredicted RBP19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms