RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 BPIFB3P59826 476 aa3.89□□□□□ -1.79
HMGCS1-207ENST00000514610 ZP4Q12836 540 aa3.89□□□□□ -1.79
HMGCS1-207ENST00000514610 ZIC1Q15915 447 aa3.89□□□□□ -1.79
HMGCS1-207ENST00000514610 TIMM50Q3ZCQ8 353 aa3.89□□□□□ -1.79
HMGCS1-207ENST00000514610 LEG1Q6P5S2 330 aa3.89□□□□□ -1.79
HMGCS1-207ENST00000514610 HACD2Q6Y1H2 254 aa3.89□□□□□ -1.79
HMGCS1-207ENST00000514610 RBM43Q6ZSC3 357 aaKnown RBP3.89□□□□□ -1.79
HMGCS1-207ENST00000514610 TSEN54Q7Z6J9 526 aaKnown RBP3.89□□□□□ -1.79
HMGCS1-207ENST00000514610 CENPSQ8N2Z9 138 aa3.89□□□□□ -1.79
HMGCS1-207ENST00000514610 LINC00612Q8N6U2 182 aa3.89□□□□□ -1.79
HMGCS1-207ENST00000514610 GPATCH11Q8N954 259 aa3.89□□□□□ -1.79
HMGCS1-207ENST00000514610 FAM71CQ8NEG0 241 aa3.89□□□□□ -1.79
HMGCS1-207ENST00000514610 NCLNQ969V3 563 aa3.89□□□□□ -1.79
HMGCS1-207ENST00000514610 DNAJA3Q96EY1 480 aa3.89□□□□□ -1.79
HMGCS1-207ENST00000514610 RAB17Q9H0T7 212 aa3.89□□□□□ -1.79
HMGCS1-207ENST00000514610 PNNQ9H307 717 aaKnown RBP3.89□□□□□ -1.79
HMGCS1-207ENST00000514610 SLC7A10Q9NS82 523 aa3.89□□□□□ -1.79
HMGCS1-207ENST00000514610 P2RX2Q9UBL9 471 aa3.89□□□□□ -1.79
HMGCS1-207ENST00000514610 SMAD5-AS1Q9Y6J3 95 aa3.89□□□□□ -1.79
HMGCS1-207ENST00000514610 POGZQ7Z3K3 1410 aa3.88□□□□□ -1.79
HMGCS1-207ENST00000514610 FBLL1A6NHQ2 334 aaKnown RBP3.88□□□□□ -1.79
HMGCS1-207ENST00000514610 E9PMD0 336 aa3.88□□□□□ -1.79
HMGCS1-207ENST00000514610 H0YL77 283 aa3.88□□□□□ -1.79
HMGCS1-207ENST00000514610 SGK494L7N484 410 aa3.88□□□□□ -1.79
HMGCS1-207ENST00000514610 RASGRF2O14827 1237 aa3.88□□□□□ -1.79
HMGCS1-207ENST00000514610 TSC22D2O75157 780 aa3.88□□□□□ -1.79
HMGCS1-207ENST00000514610 NDUFA7O95182 113 aa3.88□□□□□ -1.79
HMGCS1-207ENST00000514610 SNRPCP09234 159 aaKnown RBP3.88□□□□□ -1.79
HMGCS1-207ENST00000514610 IDSP22304 550 aa3.88□□□□□ -1.79
HMGCS1-207ENST00000514610 HERVK_113P63132 956 aa3.88□□□□□ -1.79
HMGCS1-207ENST00000514610 ERVK-8P63133 956 aa3.88□□□□□ -1.79
HMGCS1-207ENST00000514610 NOP14P78316 857 aaKnown RBP3.88□□□□□ -1.79
HMGCS1-207ENST00000514610 MRPS6P82932 125 aaKnown RBP3.88□□□□□ -1.79
HMGCS1-207ENST00000514610 SRYQ05066 204 aa3.88□□□□□ -1.79
HMGCS1-207ENST00000514610 BNIP1Q12981 228 aa3.88□□□□□ -1.79
HMGCS1-207ENST00000514610 SLC10A1Q14973 349 aa3.88□□□□□ -1.79
HMGCS1-207ENST00000514610 DMKNQ6E0U4 476 aaPredicted RBP3.88□□□□□ -1.79
HMGCS1-207ENST00000514610 IRGCQ6NXR0 463 aa3.88□□□□□ -1.79
HMGCS1-207ENST00000514610 ZNF562Q6V9R5 426 aa3.88□□□□□ -1.79
HMGCS1-207ENST00000514610 Q6ZR54 194 aa3.88□□□□□ -1.79
HMGCS1-207ENST00000514610 HSCBQ8IWL3 235 aa3.88□□□□□ -1.79
HMGCS1-207ENST00000514610 KLHL30-AS1Q8NEE0 82 aa3.88□□□□□ -1.79
HMGCS1-207ENST00000514610 RHOXF1Q8NHV9 184 aa3.88□□□□□ -1.79
HMGCS1-207ENST00000514610 RFESDQ8TAC1 157 aa3.88□□□□□ -1.79
HMGCS1-207ENST00000514610 GTSF1Q8WW33 167 aa3.88□□□□□ -1.79
HMGCS1-207ENST00000514610 FCGR1BQ92637 280 aa3.88□□□□□ -1.79
HMGCS1-207ENST00000514610 ADIPOR1Q96A54 375 aa3.88□□□□□ -1.79
HMGCS1-207ENST00000514610 KCNK16Q96T55 309 aa3.88□□□□□ -1.79
HMGCS1-207ENST00000514610 ERVK-6Q9BXR3 956 aa3.88□□□□□ -1.79
HMGCS1-207ENST00000514610 NGBQ9NPG2 151 aa3.88□□□□□ -1.79
HMGCS1-207ENST00000514610 DCAF13Q9NV06 445 aaKnown RBP3.88□□□□□ -1.79
HMGCS1-207ENST00000514610 GDAP2Q9NXN4 497 aa3.88□□□□□ -1.79
HMGCS1-207ENST00000514610 ABCC4O15439 1325 aa3.88□□□□□ -1.79
HMGCS1-207ENST00000514610 NPIPA2E9PIF3 369 aa3.87□□□□□ -1.79
HMGCS1-207ENST00000514610 PDXKO00764 312 aa3.87□□□□□ -1.79
HMGCS1-207ENST00000514610 PHOX2AO14813 284 aa3.87□□□□□ -1.79
HMGCS1-207ENST00000514610 THY1P04216 161 aa3.87□□□□□ -1.79
HMGCS1-207ENST00000514610 GHRP10912 638 aa3.87□□□□□ -1.79
HMGCS1-207ENST00000514610 LAMP1P11279 417 aa3.87□□□□□ -1.79
HMGCS1-207ENST00000514610 TSPAN8P19075 237 aa3.87□□□□□ -1.79
HMGCS1-207ENST00000514610 OR1D4P47884 311 aa3.87□□□□□ -1.79
HMGCS1-207ENST00000514610 PAX2Q02962 417 aa3.87□□□□□ -1.79
HMGCS1-207ENST00000514610 EIF2B1Q14232 305 aaKnown RBP3.87□□□□□ -1.79
HMGCS1-207ENST00000514610 RFTN1Q14699 578 aaPredicted RBP3.87□□□□□ -1.79
HMGCS1-207ENST00000514610 MICAQ29983 383 aa3.87□□□□□ -1.79
HMGCS1-207ENST00000514610 ATAD3CQ5T2N8 411 aa3.87□□□□□ -1.79
HMGCS1-207ENST00000514610 RAET1GQ6H3X3 334 aa3.87□□□□□ -1.79
HMGCS1-207ENST00000514610 P4HA3Q7Z4N8 544 aa3.87□□□□□ -1.79
HMGCS1-207ENST00000514610 UNC5CLQ8IV45 518 aa3.87□□□□□ -1.79
HMGCS1-207ENST00000514610 NFAM1Q8NET5 270 aaPredicted RBP3.87□□□□□ -1.79
HMGCS1-207ENST00000514610 WRAP53Q9BUR4 548 aaKnown RBP3.87□□□□□ -1.79
HMGCS1-207ENST00000514610 CARD6Q9BX69 1037 aa3.87□□□□□ -1.79
HMGCS1-207ENST00000514610 ACTR8Q9H981 624 aa3.87□□□□□ -1.79
HMGCS1-207ENST00000514610 MEPEQ9NQ76 525 aaPredicted RBP3.87□□□□□ -1.79
HMGCS1-207ENST00000514610 TIGARQ9NQ88 270 aa3.87□□□□□ -1.79
HMGCS1-207ENST00000514610 YAE1D1Q9NRH1 226 aa3.87□□□□□ -1.79
HMGCS1-207ENST00000514610 NAALAD2Q9Y3Q0 740 aa3.87□□□□□ -1.79
HMGCS1-207ENST00000514610 TTC26A0AVF1 554 aa3.86□□□□□ -1.79
HMGCS1-207ENST00000514610 C11orf98E9PRG8 122 aa3.86□□□□□ -1.79
HMGCS1-207ENST00000514610 LGALS8O00214 317 aa3.86□□□□□ -1.79
HMGCS1-207ENST00000514610 ALOX15BO15296 676 aa3.86□□□□□ -1.79
HMGCS1-207ENST00000514610 LANCL1O43813 399 aa3.86□□□□□ -1.79
HMGCS1-207ENST00000514610 APBB3O95704 486 aa3.86□□□□□ -1.79
HMGCS1-207ENST00000514610 GIG44P09565 113 aaPredicted RBP3.86□□□□□ -1.79
HMGCS1-207ENST00000514610 ALPIP09923 528 aa3.86□□□□□ -1.79
HMGCS1-207ENST00000514610 SLC35G4P0C7Q5 338 aa3.86□□□□□ -1.79
HMGCS1-207ENST00000514610 UMPSP11172 480 aa3.86□□□□□ -1.79
HMGCS1-207ENST00000514610 DNAJB1P25685 340 aa3.86□□□□□ -1.79
HMGCS1-207ENST00000514610 ASMTP46597 345 aa3.86□□□□□ -1.79
HMGCS1-207ENST00000514610 HTR5AP47898 357 aa3.86□□□□□ -1.79
HMGCS1-207ENST00000514610 RPL34P49207 117 aaKnown RBP3.86□□□□□ -1.79
HMGCS1-207ENST00000514610 STK19P49842 368 aaPredicted RBP3.86□□□□□ -1.79
HMGCS1-207ENST00000514610 ARHGDIBP52566 201 aa3.86□□□□□ -1.79
HMGCS1-207ENST00000514610 ADPRMQ3LIE5 342 aa3.86□□□□□ -1.79
HMGCS1-207ENST00000514610 BEND6Q5SZJ8 279 aaPredicted RBP3.86□□□□□ -1.79
HMGCS1-207ENST00000514610 CGB2Q6NT52 195 aa3.86□□□□□ -1.79
HMGCS1-207ENST00000514610 SLC39A4Q6P5W5 647 aa3.86□□□□□ -1.79
HMGCS1-207ENST00000514610 GCNT7Q6ZNI0 430 aa3.86□□□□□ -1.79
HMGCS1-207ENST00000514610 NET1Q7Z628 596 aaPredicted RBP3.86□□□□□ -1.79
HMGCS1-207ENST00000514610 SYVN1Q86TM6 617 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms