RNA–Protein interactions for RNA: ENST00000514536.5

USP46-209, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 1,589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-209ENST00000514536 DIO2Q92813 273 aa12.82□□□□□ -0.36
USP46-209ENST00000514536 FAM120BQ96EK7 910 aaKnown RBP12.82□□□□□ -0.36
USP46-209ENST00000514536 ZBTB18Q99592 522 aa12.82□□□□□ -0.36
USP46-209ENST00000514536 PROK2Q9HC23 129 aa12.82□□□□□ -0.36
USP46-209ENST00000514536 TCF7L2Q9NQB0 619 aa12.82□□□□□ -0.36
USP46-209ENST00000514536 ZCCHC3Q9NUD5 404 aaKnown RBP12.82□□□□□ -0.36
USP46-209ENST00000514536 CNOT11Q9UKZ1 510 aaKnown RBP12.82□□□□□ -0.36
USP46-209ENST00000514536 NBASA2RRP1 2371 aa12.82□□□□□ -0.36
USP46-209ENST00000514536 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.81□□□□□ -0.36
USP46-209ENST00000514536 CYSRT1A8MQ03 144 aa12.81□□□□□ -0.36
USP46-209ENST00000514536 E9PBE3 544 aa12.81□□□□□ -0.36
USP46-209ENST00000514536 RNASET2O00584 256 aaKnown RBP12.81□□□□□ -0.36
USP46-209ENST00000514536 POLR3GO15318 223 aaPredicted RBP12.81□□□□□ -0.36
USP46-209ENST00000514536 SCN2BO60939 215 aa12.81□□□□□ -0.36
USP46-209ENST00000514536 UGT2B11O75310 529 aa12.81□□□□□ -0.36
USP46-209ENST00000514536 GABRA3P34903 492 aa12.81□□□□□ -0.36
USP46-209ENST00000514536 DGKQP52824 942 aa12.81□□□□□ -0.36
USP46-209ENST00000514536 HBA1P69905 142 aa12.81□□□□□ -0.36
USP46-209ENST00000514536 PRR5P85299 388 aa12.81□□□□□ -0.36
USP46-209ENST00000514536 ELOAQ14241 798 aaKnown RBP12.81□□□□□ -0.36
USP46-209ENST00000514536 GSTA3Q16772 222 aa12.81□□□□□ -0.36
USP46-209ENST00000514536 EIF2S3LQ2VIR3 472 aaKnown RBP12.81□□□□□ -0.36
USP46-209ENST00000514536 SPDYE7PQ495Y7 208 aa12.81□□□□□ -0.36
USP46-209ENST00000514536 PDCD4Q53EL6 469 aaKnown RBP12.81□□□□□ -0.36
USP46-209ENST00000514536 BICRALQ6AI39 1079 aa12.81□□□□□ -0.36
USP46-209ENST00000514536 GK5Q6ZS86 529 aa12.81□□□□□ -0.36
USP46-209ENST00000514536 ANKRD46Q86W74 232 aa12.81□□□□□ -0.36
USP46-209ENST00000514536 FBXW8Q8N3Y1 598 aa12.81□□□□□ -0.36
USP46-209ENST00000514536 ST6GALNAC3Q8NDV1 305 aa12.81□□□□□ -0.36
USP46-209ENST00000514536 VPS37AQ8NEZ2 397 aa12.81□□□□□ -0.36
USP46-209ENST00000514536 PSMA8Q8TAA3 256 aa12.81□□□□□ -0.36
USP46-209ENST00000514536 HGDQ93099 445 aa12.81□□□□□ -0.36
USP46-209ENST00000514536 GIMAP5Q96F15 307 aa12.81□□□□□ -0.36
USP46-209ENST00000514536 C16orf58Q96GQ5 468 aa12.81□□□□□ -0.36
USP46-209ENST00000514536 COL21A1Q96P44 957 aa12.81□□□□□ -0.36
USP46-209ENST00000514536 MS4A4EQ96PG1 132 aa12.81□□□□□ -0.36
USP46-209ENST00000514536 NODALQ96S42 347 aa12.81□□□□□ -0.36
USP46-209ENST00000514536 ADOQ96SZ5 270 aa12.81□□□□□ -0.36
USP46-209ENST00000514536 YIPF4Q9BSR8 244 aa12.81□□□□□ -0.36
USP46-209ENST00000514536 LMF2Q9BU23 707 aaKnown RBP12.81□□□□□ -0.36
USP46-209ENST00000514536 CCDC28BQ9BUN5 200 aa12.81□□□□□ -0.36
USP46-209ENST00000514536 Q9N2J8 555 aa12.81□□□□□ -0.36
USP46-209ENST00000514536 TUBA8Q9NY65 449 aaPredicted RBP12.81□□□□□ -0.36
USP46-209ENST00000514536 CBLCQ9ULV8 474 aa12.81□□□□□ -0.36
USP46-209ENST00000514536 PCDHGB4Q9UN71 923 aa12.81□□□□□ -0.36
USP46-209ENST00000514536 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.81□□□□□ -0.36
USP46-209ENST00000514536 SHANK1Q9Y566 2161 aa12.81□□□□□ -0.36
USP46-209ENST00000514536 PRSS51A0A1B0GVH4 220 aa12.81□□□□□ -0.36
USP46-209ENST00000514536 TSPAN2O60636 221 aa12.81□□□□□ -0.36
USP46-209ENST00000514536 SLC22A3O75751 556 aa12.81□□□□□ -0.36
USP46-209ENST00000514536 UNC5CO95185 931 aa12.81□□□□□ -0.36
USP46-209ENST00000514536 CPSF4O95639 269 aaKnown RBP12.81□□□□□ -0.36
USP46-209ENST00000514536 KRT20P35900 424 aa12.81□□□□□ -0.36
USP46-209ENST00000514536 CASP3P42574 277 aa12.81□□□□□ -0.36
USP46-209ENST00000514536 KCNK10P57789 538 aa12.81□□□□□ -0.36
USP46-209ENST00000514536 PPIAP62937 165 aaKnown RBP12.81□□□□□ -0.36
USP46-209ENST00000514536 KCNJ2P63252 427 aa12.81□□□□□ -0.36
USP46-209ENST00000514536 RPP38P78345 283 aaKnown RBP12.81□□□□□ -0.36
USP46-209ENST00000514536 GUCY1A3Q02108 690 aa12.81□□□□□ -0.36
USP46-209ENST00000514536 DPY19L1Q2PZI1 675 aa12.81□□□□□ -0.36
USP46-209ENST00000514536 CYP27C1Q4G0S4 372 aa12.81□□□□□ -0.36
USP46-209ENST00000514536 ANXA8L1Q5VT79 327 aa12.81□□□□□ -0.36
USP46-209ENST00000514536 GFRALQ6UXV0 394 aa12.81□□□□□ -0.36
USP46-209ENST00000514536 SIAH3Q8IW03 269 aa12.81□□□□□ -0.36
USP46-209ENST00000514536 CDRT4Q8N9R6 151 aa12.81□□□□□ -0.36
USP46-209ENST00000514536 OR4A15Q8NGL6 344 aa12.81□□□□□ -0.36
USP46-209ENST00000514536 PRR7Q8TB68 274 aa12.81□□□□□ -0.36
USP46-209ENST00000514536 GPR151Q8TDV0 419 aa12.81□□□□□ -0.36
USP46-209ENST00000514536 SLC9A6Q92581 669 aa12.81□□□□□ -0.36
USP46-209ENST00000514536 JSRP1Q96MG2 331 aaPredicted RBP12.81□□□□□ -0.36
USP46-209ENST00000514536 SECISBP2Q96T21 854 aaKnown RBP12.81□□□□□ -0.36
USP46-209ENST00000514536 DOHHQ9BU89 302 aa12.81□□□□□ -0.36
USP46-209ENST00000514536 SEC14L3Q9UDX4 400 aa12.81□□□□□ -0.36
USP46-209ENST00000514536 GXYLT2A0PJZ3 443 aa12.8□□□□□ -0.36
USP46-209ENST00000514536 ANKRD33BA6NCL7 494 aa12.8□□□□□ -0.36
USP46-209ENST00000514536 OR6C70A6NIJ9 312 aa12.8□□□□□ -0.36
USP46-209ENST00000514536 TTC36A6NLP5 189 aa12.8□□□□□ -0.36
USP46-209ENST00000514536 FAM166BA8MTA8 275 aa12.8□□□□□ -0.36
USP46-209ENST00000514536 TFECO14948 347 aaPredicted RBP12.8□□□□□ -0.36
USP46-209ENST00000514536 ASNA1O43681 348 aa12.8□□□□□ -0.36
USP46-209ENST00000514536 HS6ST1O60243 411 aa12.8□□□□□ -0.36
USP46-209ENST00000514536 HMGN2P05204 90 aaKnown RBP12.8□□□□□ -0.36
USP46-209ENST00000514536 ACP2P11117 423 aa12.8□□□□□ -0.36
USP46-209ENST00000514536 IL12BP29460 328 aa12.8□□□□□ -0.36
USP46-209ENST00000514536 SOAT1P35610 550 aa12.8□□□□□ -0.36
USP46-209ENST00000514536 MAP3K8P41279 467 aa12.8□□□□□ -0.36
USP46-209ENST00000514536 PRIM2P49643 509 aa12.8□□□□□ -0.36
USP46-209ENST00000514536 PSPHP78330 225 aa12.8□□□□□ -0.36
USP46-209ENST00000514536 FOXO1Q12778 655 aa12.8□□□□□ -0.36
USP46-209ENST00000514536 TP53BP2Q13625 1128 aa12.8□□□□□ -0.36
USP46-209ENST00000514536 VPS26BQ4G0F5 336 aa12.8□□□□□ -0.36
USP46-209ENST00000514536 KRTCAP3Q53RY4 240 aa12.8□□□□□ -0.36
USP46-209ENST00000514536 MFSD12Q6NUT3 480 aa12.8□□□□□ -0.36
USP46-209ENST00000514536 PAOXQ6QHF9 649 aa12.8□□□□□ -0.36
USP46-209ENST00000514536 CLEC4FQ8N1N0 589 aa12.8□□□□□ -0.36
USP46-209ENST00000514536 SLC16A11Q8NCK7 471 aa12.8□□□□□ -0.36
USP46-209ENST00000514536 OR56A1Q8NGH5 318 aa12.8□□□□□ -0.36
USP46-209ENST00000514536 OR52N2Q8NGI0 321 aa12.8□□□□□ -0.36
USP46-209ENST00000514536 OR5AK3PQ8NH89 298 aa12.8□□□□□ -0.36
USP46-209ENST00000514536 RFWD2Q8NHY2 731 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms