RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 GMPPBQ9Y5P6 360 aa6.97□□□□□ -1.29
CLIP1-205ENST00000514271 PRSS21Q9Y6M0 314 aa6.97□□□□□ -1.29
CLIP1-205ENST00000514271 PCDH15Q96QU1 1955 aa6.97□□□□□ -1.29
CLIP1-205ENST00000514271 BCAT2O15382 392 aaPredicted RBP6.97□□□□□ -1.29
CLIP1-205ENST00000514271 SOD1P00441 154 aa6.97□□□□□ -1.29
CLIP1-205ENST00000514271 OTCP00480 354 aa6.97□□□□□ -1.29
CLIP1-205ENST00000514271 PKMP14618 531 aaKnown RBP6.97□□□□□ -1.29
CLIP1-205ENST00000514271 CFPP27918 469 aa6.97□□□□□ -1.29
CLIP1-205ENST00000514271 PLA2G5P39877 138 aa6.97□□□□□ -1.29
CLIP1-205ENST00000514271 RPIAP49247 311 aa6.97□□□□□ -1.29
CLIP1-205ENST00000514271 EVX1P49640 407 aa6.97□□□□□ -1.29
CLIP1-205ENST00000514271 RRAS2P62070 204 aaPredicted RBP6.97□□□□□ -1.29
CLIP1-205ENST00000514271 ZNF284Q2VY69 593 aa6.97□□□□□ -1.29
CLIP1-205ENST00000514271 GPR33Q49SQ1 333 aa6.97□□□□□ -1.29
CLIP1-205ENST00000514271 HSD17B12Q53GQ0 312 aa6.97□□□□□ -1.29
CLIP1-205ENST00000514271 EXOSC6Q5RKV6 272 aaKnown RBP6.97□□□□□ -1.29
CLIP1-205ENST00000514271 PROKR2Q8NFJ6 384 aa6.97□□□□□ -1.29
CLIP1-205ENST00000514271 TOR1AIP2Q8NFQ8 470 aa6.97□□□□□ -1.29
CLIP1-205ENST00000514271 HUS1BQ8NHY5 278 aa6.97□□□□□ -1.29
CLIP1-205ENST00000514271 CREB3L1Q96BA8 519 aa6.97□□□□□ -1.29
CLIP1-205ENST00000514271 FAM122AQ96E09 287 aa6.97□□□□□ -1.29
CLIP1-205ENST00000514271 ZNF514Q96K75 400 aaPredicted RBP6.97□□□□□ -1.29
CLIP1-205ENST00000514271 DMRTA2Q96SC8 542 aa6.97□□□□□ -1.29
CLIP1-205ENST00000514271 GPR174Q9BXC1 333 aa6.97□□□□□ -1.29
CLIP1-205ENST00000514271 MIR1-1HGQ9H1L0 117 aa6.97□□□□□ -1.29
CLIP1-205ENST00000514271 GIMAP4Q9NUV9 329 aa6.97□□□□□ -1.29
CLIP1-205ENST00000514271 C14orf119Q9NWQ9 140 aa6.97□□□□□ -1.29
CLIP1-205ENST00000514271 HPF1Q9NWY4 346 aa6.97□□□□□ -1.29
CLIP1-205ENST00000514271 ANKRD10Q9NXR5 420 aa6.97□□□□□ -1.29
CLIP1-205ENST00000514271 EXOGQ9Y2C4 368 aaKnown RBP6.97□□□□□ -1.29
CLIP1-205ENST00000514271 PCDHB11Q9Y5F2 797 aa6.97□□□□□ -1.29
CLIP1-205ENST00000514271 ALG5Q9Y673 324 aa6.97□□□□□ -1.29
CLIP1-205ENST00000514271 ANKRD12Q6UB98 2062 aa6.97□□□□□ -1.29
CLIP1-205ENST00000514271 CCDC88CQ9P219 2028 aa6.97□□□□□ -1.29
CLIP1-205ENST00000514271 TBC1D3DA0A087WVF3 549 aa6.96□□□□□ -1.29
CLIP1-205ENST00000514271 TBC1D3IA0A087WXS9 549 aa6.96□□□□□ -1.29
CLIP1-205ENST00000514271 TBC1D3EA0A087X179 549 aa6.96□□□□□ -1.29
CLIP1-205ENST00000514271 TBC1D3KA0A087X1G2 549 aa6.96□□□□□ -1.29
CLIP1-205ENST00000514271 A0A1B0GVC2 190 aa6.96□□□□□ -1.29
CLIP1-205ENST00000514271 TMEM129A0AVI4 362 aa6.96□□□□□ -1.29
CLIP1-205ENST00000514271 TBC1D3FA6NER0 549 aaPredicted RBP6.96□□□□□ -1.29
CLIP1-205ENST00000514271 PRR23AA6NEV1 266 aa6.96□□□□□ -1.29
CLIP1-205ENST00000514271 TBC1D3LB9A6J9 549 aa6.96□□□□□ -1.29
CLIP1-205ENST00000514271 PTGES3LE9PB15 166 aa6.96□□□□□ -1.29
CLIP1-205ENST00000514271 PCDH17O14917 1159 aa6.96□□□□□ -1.29
CLIP1-205ENST00000514271 FFAR2O15552 330 aa6.96□□□□□ -1.29
CLIP1-205ENST00000514271 PDYNP01213 254 aa6.96□□□□□ -1.29
CLIP1-205ENST00000514271 TBC1D3HP0C7X1 549 aa6.96□□□□□ -1.29
CLIP1-205ENST00000514271 PRPS2P11908 318 aa6.96□□□□□ -1.29
CLIP1-205ENST00000514271 PRKACBP22694 351 aa6.96□□□□□ -1.29
CLIP1-205ENST00000514271 CD38P28907 300 aa6.96□□□□□ -1.29
CLIP1-205ENST00000514271 GPC1P35052 558 aa6.96□□□□□ -1.29
CLIP1-205ENST00000514271 LIM2P55344 173 aa6.96□□□□□ -1.29
CLIP1-205ENST00000514271 PCSK7Q16549 785 aa6.96□□□□□ -1.29
CLIP1-205ENST00000514271 ZFP69Q49AA0 526 aa6.96□□□□□ -1.29
CLIP1-205ENST00000514271 TBC1D3GQ6DHY5 549 aa6.96□□□□□ -1.29
CLIP1-205ENST00000514271 TBC1D3CQ6IPX1 549 aa6.96□□□□□ -1.29
CLIP1-205ENST00000514271 MRNIPQ6NTE8 343 aa6.96□□□□□ -1.29
CLIP1-205ENST00000514271 LIPIQ6XZB0 460 aa6.96□□□□□ -1.29
CLIP1-205ENST00000514271 SFTPA1Q8IWL2 248 aa6.96□□□□□ -1.29
CLIP1-205ENST00000514271 TBC1D3Q8IZP1 549 aaPredicted RBP6.96□□□□□ -1.29
CLIP1-205ENST00000514271 SLC5A8Q8N695 610 aa6.96□□□□□ -1.29
CLIP1-205ENST00000514271 NUS1Q96E22 293 aa6.96□□□□□ -1.29
CLIP1-205ENST00000514271 ZNF845Q96IR2 970 aaPredicted RBP6.96□□□□□ -1.29
CLIP1-205ENST00000514271 C17orf62Q9BQA9 187 aa6.96□□□□□ -1.29
CLIP1-205ENST00000514271 TTYH2Q9BSA4 534 aa6.96□□□□□ -1.29
CLIP1-205ENST00000514271 CRB3Q9BUF7 120 aa6.96□□□□□ -1.29
CLIP1-205ENST00000514271 TIGARQ9NQ88 270 aa6.96□□□□□ -1.29
CLIP1-205ENST00000514271 NPDC1Q9NQX5 325 aaPredicted RBP6.96□□□□□ -1.29
CLIP1-205ENST00000514271 MALT1Q9UDY8 824 aa6.96□□□□□ -1.29
CLIP1-205ENST00000514271 IL20RAQ9UHF4 553 aa6.96□□□□□ -1.29
CLIP1-205ENST00000514271 RNF112Q9ULX5 631 aa6.96□□□□□ -1.29
CLIP1-205ENST00000514271 PNMA8CA0A1B0GUJ8 204 aa6.96□□□□□ -1.3
CLIP1-205ENST00000514271 A0A1W2PQU0 124 aa6.96□□□□□ -1.3
CLIP1-205ENST00000514271 GTPBP1O00178 669 aaKnown RBP6.96□□□□□ -1.3
CLIP1-205ENST00000514271 AKAP8O43823 692 aaKnown RBP6.96□□□□□ -1.3
CLIP1-205ENST00000514271 NIPSNAP2O75323 286 aa6.96□□□□□ -1.3
CLIP1-205ENST00000514271 GMNNO75496 209 aa6.96□□□□□ -1.3
CLIP1-205ENST00000514271 SULT1A3P0DMM9 295 aa6.96□□□□□ -1.3
CLIP1-205ENST00000514271 SULT1A4P0DMN0 295 aa6.96□□□□□ -1.3
CLIP1-205ENST00000514271 AOAHP28039 575 aa6.96□□□□□ -1.3
CLIP1-205ENST00000514271 MPLP40238 635 aa6.96□□□□□ -1.3
CLIP1-205ENST00000514271 RFX3P48380 749 aa6.96□□□□□ -1.3
CLIP1-205ENST00000514271 TGM4P49221 684 aa6.96□□□□□ -1.3
CLIP1-205ENST00000514271 DHPSP49366 369 aaPredicted RBP6.96□□□□□ -1.3
CLIP1-205ENST00000514271 RGS1Q08116 209 aa6.96□□□□□ -1.3
CLIP1-205ENST00000514271 ST3GAL4Q11206 333 aa6.96□□□□□ -1.3
CLIP1-205ENST00000514271 PPP1R8Q12972 351 aaKnown RBP6.96□□□□□ -1.3
CLIP1-205ENST00000514271 CAMK2DQ13557 499 aa6.96□□□□□ -1.3
CLIP1-205ENST00000514271 RGNQ15493 299 aa6.96□□□□□ -1.3
CLIP1-205ENST00000514271 AHSA2Q719I0 299 aa6.96□□□□□ -1.3
CLIP1-205ENST00000514271 PXKQ7Z7A4 578 aa6.96□□□□□ -1.3
CLIP1-205ENST00000514271 CCDC28AQ8IWP9 274 aa6.96□□□□□ -1.3
CLIP1-205ENST00000514271 POGLUT1Q8NBL1 392 aa6.96□□□□□ -1.3
CLIP1-205ENST00000514271 TMEM145Q8NBT3 493 aa6.96□□□□□ -1.3
CLIP1-205ENST00000514271 MORN4Q8NDC4 146 aa6.96□□□□□ -1.3
CLIP1-205ENST00000514271 INTS12Q96CB8 462 aaKnown RBP6.96□□□□□ -1.3
CLIP1-205ENST00000514271 CMTM3Q96MX0 182 aa6.96□□□□□ -1.3
CLIP1-205ENST00000514271 MGLLQ99685 303 aa6.96□□□□□ -1.3
CLIP1-205ENST00000514271 ZNF717Q9BY31 904 aaPredicted RBP6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms