RNA–Protein interactions for RNA: ENST00000514110.5

SNHG4-208, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 1 (best)

Gene SNHG4, Length 679 nt, Biotype retained intron, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-208ENST00000514110 PAMR1Q6UXH9 720 aa11.09□□□□□ -0.63
SNHG4-208ENST00000514110 NPSR1Q6W5P4 371 aa11.09□□□□□ -0.63
SNHG4-208ENST00000514110 ADGRE4PQ86SQ3 457 aa11.09□□□□□ -0.63
SNHG4-208ENST00000514110 PLCZ1Q86YW0 608 aa11.09□□□□□ -0.63
SNHG4-208ENST00000514110 CTAGE4Q8IX94 777 aa11.09□□□□□ -0.63
SNHG4-208ENST00000514110 EXOSC8Q96B26 276 aaKnown RBP11.09□□□□□ -0.63
SNHG4-208ENST00000514110 TMCO6Q96DC7 493 aa11.09□□□□□ -0.63
SNHG4-208ENST00000514110 SLC35A4Q96G79 324 aa11.09□□□□□ -0.63
SNHG4-208ENST00000514110 POM121Q96HA1 1249 aa11.09□□□□□ -0.63
SNHG4-208ENST00000514110 C16orf45Q96MC5 204 aaPredicted RBP11.09□□□□□ -0.63
SNHG4-208ENST00000514110 TMEM237Q96Q45 408 aa11.09□□□□□ -0.63
SNHG4-208ENST00000514110 ALPK1Q96QP1 1244 aa11.09□□□□□ -0.63
SNHG4-208ENST00000514110 UCN2Q96RP3 112 aa11.09□□□□□ -0.63
SNHG4-208ENST00000514110 ZNF382Q96SR6 550 aa11.09□□□□□ -0.63
SNHG4-208ENST00000514110 ADOQ96SZ5 270 aa11.09□□□□□ -0.63
SNHG4-208ENST00000514110 ACPTQ9BZG2 426 aa11.09□□□□□ -0.63
SNHG4-208ENST00000514110 TSPYL1Q9H0U9 437 aa11.09□□□□□ -0.63
SNHG4-208ENST00000514110 AKAP6Q13023 2319 aa11.09□□□□□ -0.63
SNHG4-208ENST00000514110 EXOC1LA0A1B0GW35 172 aa11.08□□□□□ -0.64
SNHG4-208ENST00000514110 GNG14A0A1W2PPG7 69 aa11.08□□□□□ -0.64
SNHG4-208ENST00000514110 CLCA1A8K7I4 914 aa11.08□□□□□ -0.64
SNHG4-208ENST00000514110 C17orf51A8MQB3 221 aa11.08□□□□□ -0.64
SNHG4-208ENST00000514110 PCDH7O60245 1069 aa11.08□□□□□ -0.64
SNHG4-208ENST00000514110 ULK1O75385 1050 aa11.08□□□□□ -0.64
SNHG4-208ENST00000514110 RCBTB2O95199 551 aa11.08□□□□□ -0.64
SNHG4-208ENST00000514110 ATE1O95260 518 aa11.08□□□□□ -0.64
SNHG4-208ENST00000514110 KRT6AP02538 564 aa11.08□□□□□ -0.64
SNHG4-208ENST00000514110 KRT6BP04259 564 aa11.08□□□□□ -0.64
SNHG4-208ENST00000514110 DRD2P14416 443 aa11.08□□□□□ -0.64
SNHG4-208ENST00000514110 TCEA1P23193 301 aaKnown RBP11.08□□□□□ -0.64
SNHG4-208ENST00000514110 HMOX2P30519 316 aa11.08□□□□□ -0.64
SNHG4-208ENST00000514110 GCKP35557 465 aa11.08□□□□□ -0.64
SNHG4-208ENST00000514110 KRT6CP48668 564 aa11.08□□□□□ -0.64
SNHG4-208ENST00000514110 GAS1P54826 345 aa11.08□□□□□ -0.64
SNHG4-208ENST00000514110 PPP2R2AP63151 447 aa11.08□□□□□ -0.64
SNHG4-208ENST00000514110 SORDQ00796 357 aa11.08□□□□□ -0.64
SNHG4-208ENST00000514110 KRTAP21-3Q3LHN1 58 aa11.08□□□□□ -0.64
SNHG4-208ENST00000514110 FBXW10Q5XX13 1052 aa11.08□□□□□ -0.64
SNHG4-208ENST00000514110 OR5M10Q6IEU7 315 aa11.08□□□□□ -0.64
SNHG4-208ENST00000514110 ENPP6Q6UWR7 440 aa11.08□□□□□ -0.64
SNHG4-208ENST00000514110 TIFABQ6ZNK6 161 aa11.08□□□□□ -0.64
SNHG4-208ENST00000514110 GPRIN3Q6ZVF9 776 aa11.08□□□□□ -0.64
SNHG4-208ENST00000514110 CAMKMTQ7Z624 323 aa11.08□□□□□ -0.64
SNHG4-208ENST00000514110 LUZP2Q86TE4 346 aa11.08□□□□□ -0.64
SNHG4-208ENST00000514110 IFNEQ86WN2 208 aa11.08□□□□□ -0.64
SNHG4-208ENST00000514110 OR4N2Q8NGD1 307 aa11.08□□□□□ -0.64
SNHG4-208ENST00000514110 METTL6Q8TCB7 284 aa11.08□□□□□ -0.64
SNHG4-208ENST00000514110 C16orf78Q8WTQ4 265 aa11.08□□□□□ -0.64
SNHG4-208ENST00000514110 INTS12Q96CB8 462 aaKnown RBP11.08□□□□□ -0.64
SNHG4-208ENST00000514110 MBD6Q96DN6 1003 aa11.08□□□□□ -0.64
SNHG4-208ENST00000514110 APIPQ96GX9 242 aa11.08□□□□□ -0.64
SNHG4-208ENST00000514110 VSTM2LQ96N03 204 aa11.08□□□□□ -0.64
SNHG4-208ENST00000514110 KCNA7Q96RP8 456 aa11.08□□□□□ -0.64
SNHG4-208ENST00000514110 TM9SF2Q99805 663 aa11.08□□□□□ -0.64
SNHG4-208ENST00000514110 RBM24Q9BX46 236 aaKnown RBP11.08□□□□□ -0.64
SNHG4-208ENST00000514110 PLEKHF2Q9H8W4 249 aa11.08□□□□□ -0.64
SNHG4-208ENST00000514110 FOLH1BQ9HBA9 442 aa11.08□□□□□ -0.64
SNHG4-208ENST00000514110 GALNT8Q9NY28 637 aa11.08□□□□□ -0.64
SNHG4-208ENST00000514110 TAS2R10Q9NYW0 307 aa11.08□□□□□ -0.64
SNHG4-208ENST00000514110 CLCF1Q9UBD9 225 aa11.08□□□□□ -0.64
SNHG4-208ENST00000514110 EDARQ9UNE0 448 aa11.08□□□□□ -0.64
SNHG4-208ENST00000514110 WIF1Q9Y5W5 379 aa11.08□□□□□ -0.64
SNHG4-208ENST00000514110 PLOD2O00469 737 aa11.07□□□□□ -0.64
SNHG4-208ENST00000514110 ZIC3O60481 467 aa11.07□□□□□ -0.64
SNHG4-208ENST00000514110 ABCB7O75027 752 aa11.07□□□□□ -0.64
SNHG4-208ENST00000514110 ERN1O75460 977 aaKnown RBP11.07□□□□□ -0.64
SNHG4-208ENST00000514110 BCAS2O75934 225 aaPredicted RBP11.07□□□□□ -0.64
SNHG4-208ENST00000514110 RAF1P04049 648 aa11.07□□□□□ -0.64
SNHG4-208ENST00000514110 TAC1P20366 129 aa11.07□□□□□ -0.64
SNHG4-208ENST00000514110 IMPDH1P20839 514 aa11.07□□□□□ -0.64
SNHG4-208ENST00000514110 SRD5A2P31213 254 aa11.07□□□□□ -0.64
SNHG4-208ENST00000514110 CLDN18P56856 261 aa11.07□□□□□ -0.64
SNHG4-208ENST00000514110 ADAM8P78325 824 aa11.07□□□□□ -0.64
SNHG4-208ENST00000514110 PRSS53Q2L4Q9 553 aa11.07□□□□□ -0.64
SNHG4-208ENST00000514110 SCIMPQ6UWF3 145 aa11.07□□□□□ -0.64
SNHG4-208ENST00000514110 LARP4Q71RC2 724 aaKnown RBP eCLIP11.07□□□□□ -0.64
SNHG4-208ENST00000514110 GCNT2Q8N0V5 402 aa11.07□□□□□ -0.64
SNHG4-208ENST00000514110 OR7G2Q8NG99 324 aa11.07□□□□□ -0.64
SNHG4-208ENST00000514110 RNF138Q8WVD3 245 aa11.07□□□□□ -0.64
SNHG4-208ENST00000514110 WNT2BQ93097 391 aa11.07□□□□□ -0.64
SNHG4-208ENST00000514110 EFHD2Q96C19 240 aaPredicted RBP11.07□□□□□ -0.64
SNHG4-208ENST00000514110 ERP27Q96DN0 273 aa11.07□□□□□ -0.64
SNHG4-208ENST00000514110 MTBPQ96DY7 904 aa11.07□□□□□ -0.64
SNHG4-208ENST00000514110 C11orf24Q96F05 449 aaPredicted RBP11.07□□□□□ -0.64
SNHG4-208ENST00000514110 SFXN3Q9BWM7 321 aa11.07□□□□□ -0.64
SNHG4-208ENST00000514110 GSX1Q9H4S2 264 aaPredicted RBP11.07□□□□□ -0.64
SNHG4-208ENST00000514110 SLC35C2Q9NQQ7 365 aa11.07□□□□□ -0.64
SNHG4-208ENST00000514110 DLL4Q9NR61 685 aa11.07□□□□□ -0.64
SNHG4-208ENST00000514110 DKKL1Q9UK85 242 aa11.07□□□□□ -0.64
SNHG4-208ENST00000514110 TIMM22Q9Y584 194 aa11.07□□□□□ -0.64
SNHG4-208ENST00000514110 MPDZO75970 2070 aa11.06□□□□□ -0.64
SNHG4-208ENST00000514110 A0A1W2PPR1 153 aa11.06□□□□□ -0.64
SNHG4-208ENST00000514110 TGM6O95932 706 aa11.06□□□□□ -0.64
SNHG4-208ENST00000514110 HRGP04196 525 aa11.06□□□□□ -0.64
SNHG4-208ENST00000514110 ZNF708P17019 499 aa11.06□□□□□ -0.64
SNHG4-208ENST00000514110 HOXB4P17483 251 aaPredicted RBP11.06□□□□□ -0.64
SNHG4-208ENST00000514110 ATP5F1P24539 256 aaPredicted RBP11.06□□□□□ -0.64
SNHG4-208ENST00000514110 GRK2P25098 689 aa11.06□□□□□ -0.64
SNHG4-208ENST00000514110 IL12BP29460 328 aa11.06□□□□□ -0.64
SNHG4-208ENST00000514110 TIA1P31483 386 aaKnown RBP eCLIP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms