RNA–Protein interactions for RNA: ENST00000513858.5

SEC31A-237, Transcript of SEC31 homolog A, COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC31A, Length 3,687 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC31A-237ENST00000513858 GRK3P35626 688 aa4.29□□□□□ -1.72
SEC31A-237ENST00000513858 PIGAP37287 484 aa4.29□□□□□ -1.72
SEC31A-237ENST00000513858 MC3RP41968 323 aa4.29□□□□□ -1.72
SEC31A-237ENST00000513858 XCR1P46094 333 aa4.29□□□□□ -1.72
SEC31A-237ENST00000513858 HMGA2P52926 109 aa4.29□□□□□ -1.72
SEC31A-237ENST00000513858 VSX2P58304 361 aaPredicted RBP4.29□□□□□ -1.72
SEC31A-237ENST00000513858 FOLH1Q04609 750 aa4.29□□□□□ -1.72
SEC31A-237ENST00000513858 CSTF1Q05048 431 aaKnown RBP4.29□□□□□ -1.72
SEC31A-237ENST00000513858 HSPB3Q12988 150 aa4.29□□□□□ -1.72
SEC31A-237ENST00000513858 KRT33BQ14525 404 aa4.29□□□□□ -1.72
SEC31A-237ENST00000513858 SYT16Q17RD7 645 aa4.29□□□□□ -1.72
SEC31A-237ENST00000513858 LAIR1Q6GTX8 287 aa4.29□□□□□ -1.72
SEC31A-237ENST00000513858 KLHL35Q6PF15 583 aa4.29□□□□□ -1.72
SEC31A-237ENST00000513858 TMEM107Q6UX40 140 aa4.29□□□□□ -1.72
SEC31A-237ENST00000513858 C6orf120Q7Z4R8 191 aa4.29□□□□□ -1.72
SEC31A-237ENST00000513858 ADCK2Q7Z695 626 aa4.29□□□□□ -1.72
SEC31A-237ENST00000513858 STX12Q86Y82 276 aa4.29□□□□□ -1.72
SEC31A-237ENST00000513858 MCATQ8IVS2 390 aaKnown RBP4.29□□□□□ -1.72
SEC31A-237ENST00000513858 PACRGLQ8N7B6 248 aa4.29□□□□□ -1.72
SEC31A-237ENST00000513858 OR9A4Q8NGU2 314 aa4.29□□□□□ -1.72
SEC31A-237ENST00000513858 OR10Z1Q8NGY1 313 aa4.29□□□□□ -1.72
SEC31A-237ENST00000513858 FGF11Q92914 225 aa4.29□□□□□ -1.72
SEC31A-237ENST00000513858 EXOSC8Q96B26 276 aaKnown RBP4.29□□□□□ -1.72
SEC31A-237ENST00000513858 ZG16BQ96DA0 208 aa4.29□□□□□ -1.72
SEC31A-237ENST00000513858 SLC47A1Q96FL8 570 aa4.29□□□□□ -1.72
SEC31A-237ENST00000513858 C16orf58Q96GQ5 468 aa4.29□□□□□ -1.72
SEC31A-237ENST00000513858 HSH2DQ96JZ2 352 aa4.29□□□□□ -1.72
SEC31A-237ENST00000513858 NSMCE2Q96MF7 247 aa4.29□□□□□ -1.72
SEC31A-237ENST00000513858 TRIM15Q9C019 465 aa4.29□□□□□ -1.72
SEC31A-237ENST00000513858 SPRTNQ9H040 489 aaPredicted RBP4.29□□□□□ -1.72
SEC31A-237ENST00000513858 SAP130Q9H0E3 1048 aa4.29□□□□□ -1.72
SEC31A-237ENST00000513858 SLC38A1Q9H2H9 487 aa4.29□□□□□ -1.72
SEC31A-237ENST00000513858 BCL2L10Q9HD36 194 aa4.29□□□□□ -1.72
SEC31A-237ENST00000513858 SDHAF3Q9NRP4 125 aa4.29□□□□□ -1.72
SEC31A-237ENST00000513858 MAT2BQ9NZL9 334 aa4.29□□□□□ -1.72
SEC31A-237ENST00000513858 LAMP5Q9UJQ1 280 aa4.29□□□□□ -1.72
SEC31A-237ENST00000513858 FBXW2Q9UKT8 454 aa4.29□□□□□ -1.72
SEC31A-237ENST00000513858 B4DXG7 233 aa4.29□□□□□ -1.72
SEC31A-237ENST00000513858 CLOCKO15516 846 aa4.29□□□□□ -1.72
SEC31A-237ENST00000513858 PLOD3O60568 738 aa4.29□□□□□ -1.72
SEC31A-237ENST00000513858 SRPX2O60687 465 aaPredicted RBP4.29□□□□□ -1.72
SEC31A-237ENST00000513858 LDB3O75112 727 aa4.29□□□□□ -1.72
SEC31A-237ENST00000513858 HMGN2P05204 90 aaKnown RBP4.29□□□□□ -1.72
SEC31A-237ENST00000513858 C8orf89P0DMQ9 161 aa4.29□□□□□ -1.72
SEC31A-237ENST00000513858 NR2F6P10588 404 aa4.29□□□□□ -1.72
SEC31A-237ENST00000513858 CKMT1AP12532 417 aa4.29□□□□□ -1.72
SEC31A-237ENST00000513858 CPMP14384 443 aa4.29□□□□□ -1.72
SEC31A-237ENST00000513858 DCTP40126 519 aa4.29□□□□□ -1.72
SEC31A-237ENST00000513858 RPS3AP61247 264 aaKnown RBP4.29□□□□□ -1.72
SEC31A-237ENST00000513858 GPLD1P80108 840 aa4.29□□□□□ -1.72
SEC31A-237ENST00000513858 SYPL1Q16563 259 aa4.29□□□□□ -1.72
SEC31A-237ENST00000513858 TRMT12Q53H54 448 aaKnown RBP4.29□□□□□ -1.72
SEC31A-237ENST00000513858 C6orf52Q5T4I8 152 aa4.29□□□□□ -1.72
SEC31A-237ENST00000513858 PRAMEF17Q5VTA0 474 aa4.29□□□□□ -1.72
SEC31A-237ENST00000513858 KDM4DQ6B0I6 523 aa4.29□□□□□ -1.72
SEC31A-237ENST00000513858 ERICH5Q6P6B1 374 aa4.29□□□□□ -1.72
SEC31A-237ENST00000513858 LYPD8Q6UX82 237 aa4.29□□□□□ -1.72
SEC31A-237ENST00000513858 ABHD13Q7L211 337 aa4.29□□□□□ -1.72
SEC31A-237ENST00000513858 CYP4Z1Q86W10 505 aa4.29□□□□□ -1.72
SEC31A-237ENST00000513858 CAMKVQ8NCB2 501 aa4.29□□□□□ -1.72
SEC31A-237ENST00000513858 NFKBIDQ8NI38 313 aa4.29□□□□□ -1.72
SEC31A-237ENST00000513858 TRIM63Q969Q1 353 aa4.29□□□□□ -1.72
SEC31A-237ENST00000513858 TMBIM1Q969X1 311 aa4.29□□□□□ -1.72
SEC31A-237ENST00000513858 CCDC74AQ96AQ1 378 aa4.29□□□□□ -1.72
SEC31A-237ENST00000513858 ZBED6CLQ96FA7 236 aaPredicted RBP4.29□□□□□ -1.72
SEC31A-237ENST00000513858 CD180Q99467 661 aa4.29□□□□□ -1.72
SEC31A-237ENST00000513858 TREX2Q9BQ50 279 aaPredicted RBP4.29□□□□□ -1.72
SEC31A-237ENST00000513858 MESP1Q9BRJ9 268 aa4.29□□□□□ -1.72
SEC31A-237ENST00000513858 RAB26Q9ULW5 256 aa4.29□□□□□ -1.72
SEC31A-237ENST00000513858 CORO2BQ9UQ03 480 aa4.29□□□□□ -1.72
SEC31A-237ENST00000513858 MAP4K5Q9Y4K4 846 aa4.29□□□□□ -1.72
SEC31A-237ENST00000513858 IGLV3-12A0A075B6K2 115 aa4.28□□□□□ -1.72
SEC31A-237ENST00000513858 A0A087WV62 115 aa4.28□□□□□ -1.72
SEC31A-237ENST00000513858 IGHV5-10-1A0A0J9YXX1 117 aa4.28□□□□□ -1.72
SEC31A-237ENST00000513858 A0A1W2PNU3 283 aaPredicted RBP4.28□□□□□ -1.72
SEC31A-237ENST00000513858 OR2W5A6NFC9 320 aa4.28□□□□□ -1.72
SEC31A-237ENST00000513858 ZNF860A6NHJ4 632 aa4.28□□□□□ -1.72
SEC31A-237ENST00000513858 CDX4O14627 284 aaPredicted RBP4.28□□□□□ -1.72
SEC31A-237ENST00000513858 TOX3O15405 576 aaPredicted RBP4.28□□□□□ -1.72
SEC31A-237ENST00000513858 TPST1O60507 370 aa4.28□□□□□ -1.72
SEC31A-237ENST00000513858 ADAM11O75078 769 aa4.28□□□□□ -1.72
SEC31A-237ENST00000513858 BCAS1O75363 584 aaPredicted RBP4.28□□□□□ -1.72
SEC31A-237ENST00000513858 RDH16O75452 317 aa4.28□□□□□ -1.72
SEC31A-237ENST00000513858 LYPD3O95274 346 aa4.28□□□□□ -1.72
SEC31A-237ENST00000513858 IFNA14P01570 189 aa4.28□□□□□ -1.72
SEC31A-237ENST00000513858 GUSBP08236 651 aa4.28□□□□□ -1.72
SEC31A-237ENST00000513858 ALPPL2P10696 532 aa4.28□□□□□ -1.72
SEC31A-237ENST00000513858 ACP2P11117 423 aa4.28□□□□□ -1.72
SEC31A-237ENST00000513858 TNFRSF1BP20333 461 aa4.28□□□□□ -1.72
SEC31A-237ENST00000513858 CDH3P22223 829 aa4.28□□□□□ -1.72
SEC31A-237ENST00000513858 PPIBP23284 216 aaKnown RBP4.28□□□□□ -1.72
SEC31A-237ENST00000513858 FEN1P39748 380 aaKnown RBP4.28□□□□□ -1.72
SEC31A-237ENST00000513858 EMDP50402 254 aa4.28□□□□□ -1.72
SEC31A-237ENST00000513858 ST13P50502 369 aaKnown RBP4.28□□□□□ -1.72
SEC31A-237ENST00000513858 NCBP2P52298 156 aaKnown RBP eCLIP4.28□□□□□ -1.72
SEC31A-237ENST00000513858 RAB38P57729 211 aa4.28□□□□□ -1.72
SEC31A-237ENST00000513858 GNG2P59768 71 aa4.28□□□□□ -1.72
SEC31A-237ENST00000513858 SIM1P81133 766 aaPredicted RBP4.28□□□□□ -1.72
SEC31A-237ENST00000513858 PSG6Q00889 435 aa4.28□□□□□ -1.72
SEC31A-237ENST00000513858 RHAGQ02094 409 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms