RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 RETREG3Q86VR2 466 aa9.04□□□□□ -0.96
TOPBP1-209ENST00000513818 SNX32Q86XE0 403 aa9.04□□□□□ -0.96
TOPBP1-209ENST00000513818 LGI4Q8N135 537 aa9.04□□□□□ -0.96
TOPBP1-209ENST00000513818 ARMC10Q8N2F6 343 aa9.04□□□□□ -0.96
TOPBP1-209ENST00000513818 ZADH2Q8N4Q0 377 aa9.04□□□□□ -0.96
TOPBP1-209ENST00000513818 CPSF7Q8N684 471 aaKnown RBP9.04□□□□□ -0.96
TOPBP1-209ENST00000513818 POU5F2Q8N7G0 328 aa9.04□□□□□ -0.96
TOPBP1-209ENST00000513818 SLC16A11Q8NCK7 471 aa9.04□□□□□ -0.96
TOPBP1-209ENST00000513818 FAM13CQ8NE31 585 aa9.04□□□□□ -0.96
TOPBP1-209ENST00000513818 OR10G3Q8NGC4 313 aa9.04□□□□□ -0.96
TOPBP1-209ENST00000513818 OR5L2Q8NGL0 311 aa9.04□□□□□ -0.96
TOPBP1-209ENST00000513818 PSMA8Q8TAA3 256 aa9.04□□□□□ -0.96
TOPBP1-209ENST00000513818 SLC22A8Q8TCC7 542 aa9.04□□□□□ -0.96
TOPBP1-209ENST00000513818 SFXN5Q8TD22 340 aa9.04□□□□□ -0.96
TOPBP1-209ENST00000513818 TM9SF4Q92544 642 aa9.04□□□□□ -0.96
TOPBP1-209ENST00000513818 CDS1Q92903 461 aa9.04□□□□□ -0.96
TOPBP1-209ENST00000513818 TMBIM1Q969X1 311 aa9.04□□□□□ -0.96
TOPBP1-209ENST00000513818 EFHD2Q96C19 240 aaPredicted RBP9.04□□□□□ -0.96
TOPBP1-209ENST00000513818 OMA1Q96E52 524 aa9.04□□□□□ -0.96
TOPBP1-209ENST00000513818 RMND5BQ96G75 393 aaPredicted RBP9.04□□□□□ -0.96
TOPBP1-209ENST00000513818 LCORQ96JN0 433 aaPredicted RBP9.04□□□□□ -0.96
TOPBP1-209ENST00000513818 SLC35G5Q96KT7 338 aa9.04□□□□□ -0.96
TOPBP1-209ENST00000513818 BTBD9Q96Q07 612 aa9.04□□□□□ -0.96
TOPBP1-209ENST00000513818 SLC35A5Q9BS91 424 aa9.04□□□□□ -0.96
TOPBP1-209ENST00000513818 TRIM8Q9BZR9 551 aa9.04□□□□□ -0.96
TOPBP1-209ENST00000513818 EPN3Q9H201 632 aa9.04□□□□□ -0.96
TOPBP1-209ENST00000513818 C3orf14Q9HBI5 128 aa9.04□□□□□ -0.96
TOPBP1-209ENST00000513818 SLC52A3Q9NQ40 469 aa9.04□□□□□ -0.96
TOPBP1-209ENST00000513818 GPATCH2Q9NW75 528 aa9.04□□□□□ -0.96
TOPBP1-209ENST00000513818 HPF1Q9NWY4 346 aa9.04□□□□□ -0.96
TOPBP1-209ENST00000513818 FLRT3Q9NZU0 649 aa9.04□□□□□ -0.96
TOPBP1-209ENST00000513818 SLAMF8Q9P0V8 285 aa9.04□□□□□ -0.96
TOPBP1-209ENST00000513818 BTNL2Q9UIR0 455 aa9.04□□□□□ -0.96
TOPBP1-209ENST00000513818 PCDHGB4Q9UN71 923 aa9.04□□□□□ -0.96
TOPBP1-209ENST00000513818 CFL2Q9Y281 166 aa9.04□□□□□ -0.96
TOPBP1-209ENST00000513818 YARS2Q9Y2Z4 477 aaKnown RBP9.04□□□□□ -0.96
TOPBP1-209ENST00000513818 OR10H1Q9Y4A9 318 aa9.04□□□□□ -0.96
TOPBP1-209ENST00000513818 TLN1Q9Y490 2541 aaKnown RBP9.04□□□□□ -0.96
TOPBP1-209ENST00000513818 CHD6Q8TD26 2715 aa9.03□□□□□ -0.96
TOPBP1-209ENST00000513818 DPM1O60762 260 aa9.03□□□□□ -0.96
TOPBP1-209ENST00000513818 BCAS2O75934 225 aaPredicted RBP9.03□□□□□ -0.96
TOPBP1-209ENST00000513818 ANP32DO95626 131 aa9.03□□□□□ -0.96
TOPBP1-209ENST00000513818 IGKV1D-16P01601 117 aa9.03□□□□□ -0.96
TOPBP1-209ENST00000513818 CCL3P10147 92 aa9.03□□□□□ -0.96
TOPBP1-209ENST00000513818 PTPN6P29350 595 aa9.03□□□□□ -0.96
TOPBP1-209ENST00000513818 GABRA3P34903 492 aa9.03□□□□□ -0.96
TOPBP1-209ENST00000513818 CASRP41180 1078 aa9.03□□□□□ -0.96
TOPBP1-209ENST00000513818 PPICP45877 212 aa9.03□□□□□ -0.96
TOPBP1-209ENST00000513818 CYB561P49447 251 aa9.03□□□□□ -0.96
TOPBP1-209ENST00000513818 TNFSF10P50591 281 aa9.03□□□□□ -0.96
TOPBP1-209ENST00000513818 HLCSP50747 726 aa9.03□□□□□ -0.96
TOPBP1-209ENST00000513818 RNF144AP50876 292 aaPredicted RBP9.03□□□□□ -0.96
TOPBP1-209ENST00000513818 TLR1Q15399 786 aa9.03□□□□□ -0.96
TOPBP1-209ENST00000513818 PLEKHN1Q494U1 663 aaPredicted RBP9.03□□□□□ -0.96
TOPBP1-209ENST00000513818 SOWAHCQ53LP3 525 aaPredicted RBP9.03□□□□□ -0.96
TOPBP1-209ENST00000513818 COX20Q5RI15 118 aa9.03□□□□□ -0.96
TOPBP1-209ENST00000513818 PRAMEF20Q5VT98 475 aa9.03□□□□□ -0.96
TOPBP1-209ENST00000513818 METTL21CQ5VZV1 264 aa9.03□□□□□ -0.96
TOPBP1-209ENST00000513818 BICRALQ6AI39 1079 aa9.03□□□□□ -0.96
TOPBP1-209ENST00000513818 TNFAIP8L2Q6P589 184 aaPredicted RBP9.03□□□□□ -0.96
TOPBP1-209ENST00000513818 FIGNL1Q6PIW4 674 aa9.03□□□□□ -0.96
TOPBP1-209ENST00000513818 C6orf120Q7Z4R8 191 aa9.03□□□□□ -0.96
TOPBP1-209ENST00000513818 ZAR1Q86SH2 424 aa9.03□□□□□ -0.96
TOPBP1-209ENST00000513818 TREML1Q86YW5 311 aa9.03□□□□□ -0.96
TOPBP1-209ENST00000513818 MSRB3Q8IXL7 192 aa9.03□□□□□ -0.96
TOPBP1-209ENST00000513818 TAGAPQ8N103 731 aa9.03□□□□□ -0.96
TOPBP1-209ENST00000513818 NATD1Q8N6N6 113 aa9.03□□□□□ -0.96
TOPBP1-209ENST00000513818 TEX19Q8NA77 164 aa9.03□□□□□ -0.96
TOPBP1-209ENST00000513818 Q8NA96 180 aa9.03□□□□□ -0.96
TOPBP1-209ENST00000513818 MDS2Q8NDY4 140 aa9.03□□□□□ -0.96
TOPBP1-209ENST00000513818 VPS37AQ8NEZ2 397 aa9.03□□□□□ -0.96
TOPBP1-209ENST00000513818 OR56A1Q8NGH5 318 aa9.03□□□□□ -0.96
TOPBP1-209ENST00000513818 GPR151Q8TDV0 419 aa9.03□□□□□ -0.96
TOPBP1-209ENST00000513818 GTF2H4Q92759 462 aa9.03□□□□□ -0.96
TOPBP1-209ENST00000513818 ERP27Q96DN0 273 aa9.03□□□□□ -0.96
TOPBP1-209ENST00000513818 SPACA9Q96E40 222 aaPredicted RBP9.03□□□□□ -0.96
TOPBP1-209ENST00000513818 ITCHQ96J02 903 aa9.03□□□□□ -0.96
TOPBP1-209ENST00000513818 OR7D2Q96RA2 312 aa9.03□□□□□ -0.96
TOPBP1-209ENST00000513818 CCT8L2Q96SF2 557 aa9.03□□□□□ -0.96
TOPBP1-209ENST00000513818 LMF2Q9BU23 707 aaKnown RBP9.03□□□□□ -0.96
TOPBP1-209ENST00000513818 PAIP1Q9H074 479 aaKnown RBP9.03□□□□□ -0.96
TOPBP1-209ENST00000513818 IL1RL2Q9HB29 575 aa9.03□□□□□ -0.96
TOPBP1-209ENST00000513818 NTMQ9P121 344 aa9.03□□□□□ -0.96
TOPBP1-209ENST00000513818 VPS4AQ9UN37 437 aa9.03□□□□□ -0.96
TOPBP1-209ENST00000513818 GPR55Q9Y2T6 319 aaPredicted RBP9.03□□□□□ -0.96
TOPBP1-209ENST00000513818 NPFFR2Q9Y5X5 522 aa9.03□□□□□ -0.96
TOPBP1-209ENST00000513818 KCNE3Q9Y6H6 103 aa9.03□□□□□ -0.96
TOPBP1-209ENST00000513818 CAPN7Q9Y6W3 813 aa9.03□□□□□ -0.96
TOPBP1-209ENST00000513818 EML6Q6ZMW3 1958 aa9.03□□□□□ -0.96
TOPBP1-209ENST00000513818 NPIPA5A0A0B4J1W7 369 aa9.02□□□□□ -0.97
TOPBP1-209ENST00000513818 PINLYPA6NC86 204 aa9.02□□□□□ -0.97
TOPBP1-209ENST00000513818 C17orf51A8MQB3 221 aa9.02□□□□□ -0.97
TOPBP1-209ENST00000513818 NPIPA7E9PJI5 369 aa9.02□□□□□ -0.97
TOPBP1-209ENST00000513818 FBP2O00757 339 aa9.02□□□□□ -0.97
TOPBP1-209ENST00000513818 ANGPT2O15123 496 aa9.02□□□□□ -0.97
TOPBP1-209ENST00000513818 UGT2B11O75310 529 aa9.02□□□□□ -0.97
TOPBP1-209ENST00000513818 SLC25A12O75746 678 aa9.02□□□□□ -0.97
TOPBP1-209ENST00000513818 C1QL1O75973 258 aa9.02□□□□□ -0.97
TOPBP1-209ENST00000513818 NKX2-2O95096 273 aa9.02□□□□□ -0.97
TOPBP1-209ENST00000513818 SNRPB2P08579 225 aaKnown RBP9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms