RNA–Protein interactions for RNA: ENST00000513562.1

DDX41-216, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-216ENST00000513562 FNTAP49354 379 aa9.81□□□□□ -0.84
DDX41-216ENST00000513562 NEK2P51955 445 aa9.81□□□□□ -0.84
DDX41-216ENST00000513562 GAS1P54826 345 aa9.81□□□□□ -0.84
DDX41-216ENST00000513562 VLDLRP98155 873 aa9.81□□□□□ -0.84
DDX41-216ENST00000513562 SRSF2Q01130 221 aaKnown RBP9.81□□□□□ -0.84
DDX41-216ENST00000513562 POU4F1Q01851 419 aa9.81□□□□□ -0.84
DDX41-216ENST00000513562 RUNX1T1Q06455 604 aa9.81□□□□□ -0.84
DDX41-216ENST00000513562 MAP4K2Q12851 820 aa9.81□□□□□ -0.84
DDX41-216ENST00000513562 EXOSC7Q15024 291 aaKnown RBP9.81□□□□□ -0.84
DDX41-216ENST00000513562 RAET1LQ5VY80 246 aa9.81□□□□□ -0.84
DDX41-216ENST00000513562 FAM111BQ6SJ93 734 aa9.81□□□□□ -0.84
DDX41-216ENST00000513562 DNAJC14Q6Y2X3 702 aaPredicted RBP9.81□□□□□ -0.84
DDX41-216ENST00000513562 PDIK1LQ8N165 341 aa9.81□□□□□ -0.84
DDX41-216ENST00000513562 METTL25Q8N6Q8 603 aa9.81□□□□□ -0.84
DDX41-216ENST00000513562 FADS6Q8N9I5 356 aa9.81□□□□□ -0.84
DDX41-216ENST00000513562 ADCY4Q8NFM4 1077 aa9.81□□□□□ -0.84
DDX41-216ENST00000513562 TRIM58Q8NG06 486 aa9.81□□□□□ -0.84
DDX41-216ENST00000513562 EXT2Q93063 718 aa9.81□□□□□ -0.84
DDX41-216ENST00000513562 TMBIM1Q969X1 311 aa9.81□□□□□ -0.84
DDX41-216ENST00000513562 C11orf24Q96F05 449 aaPredicted RBP9.81□□□□□ -0.84
DDX41-216ENST00000513562 MS4A14Q96JA4 679 aa9.81□□□□□ -0.84
DDX41-216ENST00000513562 HS6ST2Q96MM7 605 aa9.81□□□□□ -0.84
DDX41-216ENST00000513562 KCNK17Q96T54 332 aa9.81□□□□□ -0.84
DDX41-216ENST00000513562 CAB39LQ9H9S4 337 aa9.81□□□□□ -0.84
DDX41-216ENST00000513562 LRTM1Q9HBL6 345 aa9.81□□□□□ -0.84
DDX41-216ENST00000513562 MOCS1Q9NZB8 636 aa9.81□□□□□ -0.84
DDX41-216ENST00000513562 NUDT4Q9NZJ9 180 aa9.81□□□□□ -0.84
DDX41-216ENST00000513562 MAT2BQ9NZL9 334 aa9.81□□□□□ -0.84
DDX41-216ENST00000513562 WHRNQ9P202 907 aa9.81□□□□□ -0.84
DDX41-216ENST00000513562 OPTCQ9UBM4 332 aa9.81□□□□□ -0.84
DDX41-216ENST00000513562 BCAP29Q9UHQ4 241 aa9.81□□□□□ -0.84
DDX41-216ENST00000513562 GDF2Q9UK05 429 aaPredicted RBP9.81□□□□□ -0.84
DDX41-216ENST00000513562 EMC9Q9Y3B6 208 aa9.81□□□□□ -0.84
DDX41-216ENST00000513562 PCDHGA11Q9Y5H2 935 aa9.81□□□□□ -0.84
DDX41-216ENST00000513562 TEX264Q9Y6I9 313 aa9.81□□□□□ -0.84
DDX41-216ENST00000513562 MED12Q93074 2177 aa9.81□□□□□ -0.84
DDX41-216ENST00000513562 ABCA1O95477 2261 aa9.8□□□□□ -0.84
DDX41-216ENST00000513562 C17orf51A8MQB3 221 aa9.8□□□□□ -0.84
DDX41-216ENST00000513562 H0YIV9 168 aa9.8□□□□□ -0.84
DDX41-216ENST00000513562 LINC01387J3KSC0 135 aa9.8□□□□□ -0.84
DDX41-216ENST00000513562 PHGDHO43175 533 aaKnown RBP9.8□□□□□ -0.84
DDX41-216ENST00000513562 SS18L1O75177 396 aaPredicted RBP9.8□□□□□ -0.84
DDX41-216ENST00000513562 AQP8O94778 261 aa9.8□□□□□ -0.84
DDX41-216ENST00000513562 SEMA3DO95025 777 aa9.8□□□□□ -0.84
DDX41-216ENST00000513562 ATP1B1P05026 303 aa9.8□□□□□ -0.84
DDX41-216ENST00000513562 PSMB1P20618 241 aaKnown RBP9.8□□□□□ -0.84
DDX41-216ENST00000513562 IL11P20809 199 aa9.8□□□□□ -0.84
DDX41-216ENST00000513562 EMDP50402 254 aa9.8□□□□□ -0.84
DDX41-216ENST00000513562 SLC12A2P55011 1212 aa9.8□□□□□ -0.84
DDX41-216ENST00000513562 CASP9P55211 416 aa9.8□□□□□ -0.84
DDX41-216ENST00000513562 CLDN20P56880 219 aa9.8□□□□□ -0.84
DDX41-216ENST00000513562 PHEXP78562 749 aa9.8□□□□□ -0.84
DDX41-216ENST00000513562 FAPQ12884 760 aa9.8□□□□□ -0.84
DDX41-216ENST00000513562 ILF2Q12905 390 aaKnown RBP9.8□□□□□ -0.84
DDX41-216ENST00000513562 PPP1R7Q15435 360 aa9.8□□□□□ -0.84
DDX41-216ENST00000513562 PGGHGQ32M88 737 aa9.8□□□□□ -0.84
DDX41-216ENST00000513562 ZNF672Q499Z4 452 aaPredicted RBP9.8□□□□□ -0.84
DDX41-216ENST00000513562 NCMAPQ5T1S8 102 aa9.8□□□□□ -0.84
DDX41-216ENST00000513562 LIPJQ5W064 366 aa9.8□□□□□ -0.84
DDX41-216ENST00000513562 OR10H5Q8NGA6 315 aa9.8□□□□□ -0.84
DDX41-216ENST00000513562 OR4K17Q8NGC6 315 aa9.8□□□□□ -0.84
DDX41-216ENST00000513562 OR52R1Q8NGF1 315 aa9.8□□□□□ -0.84
DDX41-216ENST00000513562 NEUROG1Q92886 237 aa9.8□□□□□ -0.84
DDX41-216ENST00000513562 GFM2Q969S9 779 aaKnown RBP9.8□□□□□ -0.84
DDX41-216ENST00000513562 LRRC39Q96DD0 335 aa9.8□□□□□ -0.84
DDX41-216ENST00000513562 TSPAN17Q96FV3 270 aa9.8□□□□□ -0.84
DDX41-216ENST00000513562 TNFRSF13CQ96RJ3 184 aa9.8□□□□□ -0.84
DDX41-216ENST00000513562 ADOQ96SZ5 270 aa9.8□□□□□ -0.84
DDX41-216ENST00000513562 RHNO1Q9BSD3 238 aa9.8□□□□□ -0.84
DDX41-216ENST00000513562 TRAF4Q9BUZ4 470 aaPredicted RBP9.8□□□□□ -0.84
DDX41-216ENST00000513562 BRINP2Q9C0B6 783 aa9.8□□□□□ -0.84
DDX41-216ENST00000513562 STMN4Q9H169 189 aaPredicted RBP9.8□□□□□ -0.84
DDX41-216ENST00000513562 FANCFQ9NPI8 374 aa9.8□□□□□ -0.84
DDX41-216ENST00000513562 NSMCE4AQ9NXX6 385 aa9.8□□□□□ -0.84
DDX41-216ENST00000513562 PRODH2Q9UF12 536 aa9.8□□□□□ -0.84
DDX41-216ENST00000513562 ASIC3Q9UHC3 531 aa9.8□□□□□ -0.84
DDX41-216ENST00000513562 GPR52Q9Y2T5 361 aa9.8□□□□□ -0.84
DDX41-216ENST00000513562 GPR55Q9Y2T6 319 aaPredicted RBP9.8□□□□□ -0.84
DDX41-216ENST00000513562 ZNF337Q9Y3M9 751 aa9.8□□□□□ -0.84
DDX41-216ENST00000513562 FREM3P0C091 2139 aa9.8□□□□□ -0.84
DDX41-216ENST00000513562 CR1P17927 2039 aa9.8□□□□□ -0.84
DDX41-216ENST00000513562 UQCRHLA0A096LP55 91 aa9.79□□□□□ -0.84
DDX41-216ENST00000513562 A0A1W2PP18 115 aa9.79□□□□□ -0.84
DDX41-216ENST00000513562 OR2M5A3KFT3 312 aa9.79□□□□□ -0.84
DDX41-216ENST00000513562 H3BML4 177 aa9.79□□□□□ -0.84
DDX41-216ENST00000513562 CLOCKO15516 846 aa9.79□□□□□ -0.84
DDX41-216ENST00000513562 TSPAN2O60636 221 aa9.79□□□□□ -0.84
DDX41-216ENST00000513562 REM1O75628 298 aa9.79□□□□□ -0.84
DDX41-216ENST00000513562 CD3EP07766 207 aa9.79□□□□□ -0.84
DDX41-216ENST00000513562 HK1P19367 917 aa9.79□□□□□ -0.84
DDX41-216ENST00000513562 DEKP35659 375 aaKnown RBP9.79□□□□□ -0.84
DDX41-216ENST00000513562 GPX6P59796 221 aa9.79□□□□□ -0.84
DDX41-216ENST00000513562 RPS3AP61247 264 aaKnown RBP9.79□□□□□ -0.84
DDX41-216ENST00000513562 LOXL1Q08397 574 aaPredicted RBP9.79□□□□□ -0.84
DDX41-216ENST00000513562 EFR3AQ14156 821 aa9.79□□□□□ -0.84
DDX41-216ENST00000513562 GANABQ14697 944 aaKnown RBP9.79□□□□□ -0.84
DDX41-216ENST00000513562 ZNF662Q6ZS27 426 aa9.79□□□□□ -0.84
DDX41-216ENST00000513562 BEND4Q6ZU67 534 aa9.79□□□□□ -0.84
DDX41-216ENST00000513562 MYLK4Q86YV6 388 aaPredicted RBP9.79□□□□□ -0.84
DDX41-216ENST00000513562 OR2M3Q8NG83 312 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms