RNA–Protein interactions for RNA: ENST00000513525.1

CCL28-203, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best) BASIC

Gene CCL28, Length 1,518 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-203ENST00000513525 PRSS44E7EML9 344 aa9.13□□□□□ -0.95
CCL28-203ENST00000513525 NME4O00746 187 aa9.13□□□□□ -0.95
CCL28-203ENST00000513525 HNRNPRO43390 633 aaKnown RBP9.13□□□□□ -0.95
CCL28-203ENST00000513525 ASNA1O43681 348 aa9.13□□□□□ -0.95
CCL28-203ENST00000513525 CTNSO60931 367 aa9.13□□□□□ -0.95
CCL28-203ENST00000513525 ITGA10O75578 1167 aa9.13□□□□□ -0.95
CCL28-203ENST00000513525 F12P00748 615 aaPredicted RBP9.13□□□□□ -0.95
CCL28-203ENST00000513525 HSD3B1P14060 373 aa9.13□□□□□ -0.95
CCL28-203ENST00000513525 AGAP20933 346 aa9.13□□□□□ -0.95
CCL28-203ENST00000513525 HSD3B2P26439 372 aa9.13□□□□□ -0.95
CCL28-203ENST00000513525 IL12AP29459 219 aa9.13□□□□□ -0.95
CCL28-203ENST00000513525 GTF2A1P52655 376 aaPredicted RBP9.13□□□□□ -0.95
CCL28-203ENST00000513525 CLNS1AP54105 237 aaKnown RBP9.13□□□□□ -0.95
CCL28-203ENST00000513525 RPL38P63173 70 aaKnown RBP9.13□□□□□ -0.95
CCL28-203ENST00000513525 MRPS22P82650 360 aaKnown RBP9.13□□□□□ -0.95
CCL28-203ENST00000513525 CSTF3Q12996 717 aaKnown RBP9.13□□□□□ -0.95
CCL28-203ENST00000513525 C3AR1Q16581 482 aa9.13□□□□□ -0.95
CCL28-203ENST00000513525 TMEM35AQ53FP2 167 aa9.13□□□□□ -0.95
CCL28-203ENST00000513525 C6orf10Q5SRN2 563 aa9.13□□□□□ -0.95
CCL28-203ENST00000513525 FRG2Q64ET8 278 aa9.13□□□□□ -0.95
CCL28-203ENST00000513525 MED27Q6P2C8 311 aa9.13□□□□□ -0.95
CCL28-203ENST00000513525 ZNF793Q6ZN11 406 aa9.13□□□□□ -0.95
CCL28-203ENST00000513525 VASH1Q7L8A9 365 aaPredicted RBP9.13□□□□□ -0.95
CCL28-203ENST00000513525 SPATA24Q86W54 205 aa9.13□□□□□ -0.95
CCL28-203ENST00000513525 DHFR2Q86XF0 187 aa9.13□□□□□ -0.95
CCL28-203ENST00000513525 SPPL2CQ8IUH8 684 aa9.13□□□□□ -0.95
CCL28-203ENST00000513525 LURAP1LQ8IV03 231 aa9.13□□□□□ -0.95
CCL28-203ENST00000513525 AQP12AQ8IXF9 295 aa9.13□□□□□ -0.95
CCL28-203ENST00000513525 CCDC116Q8IYX3 515 aa9.13□□□□□ -0.95
CCL28-203ENST00000513525 GHDCQ8N2G8 530 aa9.13□□□□□ -0.95
CCL28-203ENST00000513525 TMEM132CQ8N3T6 1108 aa9.13□□□□□ -0.95
CCL28-203ENST00000513525 RNF148Q8N7C7 305 aa9.13□□□□□ -0.95
CCL28-203ENST00000513525 C7orf57Q8NEG2 295 aa9.13□□□□□ -0.95
CCL28-203ENST00000513525 SELENOMQ8WWX9 145 aa9.13□□□□□ -0.95
CCL28-203ENST00000513525 NCLNQ969V3 563 aa9.13□□□□□ -0.95
CCL28-203ENST00000513525 MAGED4Q96JG8 741 aa9.13□□□□□ -0.95
CCL28-203ENST00000513525 FRG2BQ96QU4 278 aa9.13□□□□□ -0.95
CCL28-203ENST00000513525 F2RL3Q96RI0 385 aa9.13□□□□□ -0.95
CCL28-203ENST00000513525 CSF3RQ99062 836 aa9.13□□□□□ -0.95
CCL28-203ENST00000513525 KLHL4Q9C0H6 718 aa9.13□□□□□ -0.95
CCL28-203ENST00000513525 PNO1Q9NRX1 252 aaKnown RBP9.13□□□□□ -0.95
CCL28-203ENST00000513525 KCMF1Q9P0J7 381 aa9.13□□□□□ -0.95
CCL28-203ENST00000513525 ADGRE2Q9UHX3 823 aa9.13□□□□□ -0.95
CCL28-203ENST00000513525 PACSIN3Q9UKS6 424 aa9.13□□□□□ -0.95
CCL28-203ENST00000513525 AP3M1Q9Y2T2 418 aa9.13□□□□□ -0.95
CCL28-203ENST00000513525 YARS2Q9Y2Z4 477 aaKnown RBP9.13□□□□□ -0.95
CCL28-203ENST00000513525 TSC22D4Q9Y3Q8 395 aa9.13□□□□□ -0.95
CCL28-203ENST00000513525 PCDHA9Q9Y5H5 950 aa9.13□□□□□ -0.95
CCL28-203ENST00000513525 DCHS2Q6V1P9 2916 aa9.13□□□□□ -0.95
CCL28-203ENST00000513525 SLC35F4A4IF30 521 aa9.12□□□□□ -0.95
CCL28-203ENST00000513525 NPIPA5E9PKD4 350 aa9.12□□□□□ -0.95
CCL28-203ENST00000513525 KLRC4-KLRK1H3BQV0 150 aa9.12□□□□□ -0.95
CCL28-203ENST00000513525 SEC22BO75396 215 aa9.12□□□□□ -0.95
CCL28-203ENST00000513525 ZFAND5O76080 213 aa9.12□□□□□ -0.95
CCL28-203ENST00000513525 PDYNP01213 254 aa9.12□□□□□ -0.95
CCL28-203ENST00000513525 IL6P05231 212 aa9.12□□□□□ -0.95
CCL28-203ENST00000513525 ZNF24P17028 368 aa9.12□□□□□ -0.95
CCL28-203ENST00000513525 ATP5A1P25705 553 aaKnown RBP9.12□□□□□ -0.95
CCL28-203ENST00000513525 PPP2R1BP30154 601 aa9.12□□□□□ -0.95
CCL28-203ENST00000513525 ARFIP1P53367 373 aa9.12□□□□□ -0.95
CCL28-203ENST00000513525 ADORA2A-AS1P86434 159 aa9.12□□□□□ -0.95
CCL28-203ENST00000513525 SERTAD2Q14140 314 aa9.12□□□□□ -0.95
CCL28-203ENST00000513525 KIAA0040Q15053 153 aa9.12□□□□□ -0.95
CCL28-203ENST00000513525 CPSF6Q16630 551 aaKnown RBP eCLIP9.12□□□□□ -0.95
CCL28-203ENST00000513525 TIGD2Q4W5G0 525 aa9.12□□□□□ -0.95
CCL28-203ENST00000513525 SGO1Q5FBB7 561 aa9.12□□□□□ -0.95
CCL28-203ENST00000513525 OGFRL1Q5TC84 451 aaPredicted RBP9.12□□□□□ -0.95
CCL28-203ENST00000513525 SP5Q6BEB4 398 aaPredicted RBP9.12□□□□□ -0.95
CCL28-203ENST00000513525 GRHL2Q6ISB3 625 aa9.12□□□□□ -0.95
CCL28-203ENST00000513525 LCN8Q6JVE9 175 aa9.12□□□□□ -0.95
CCL28-203ENST00000513525 XKRXQ6PP77 449 aa9.12□□□□□ -0.95
CCL28-203ENST00000513525 RNF111Q6ZNA4 994 aa9.12□□□□□ -0.95
CCL28-203ENST00000513525 UBE3DQ7Z6J8 389 aa9.12□□□□□ -0.95
CCL28-203ENST00000513525 MRGPRGQ86SM5 289 aa9.12□□□□□ -0.95
CCL28-203ENST00000513525 CHERPQ8IWX8 916 aaKnown RBP9.12□□□□□ -0.95
CCL28-203ENST00000513525 GPALPP1Q8IXQ4 340 aa9.12□□□□□ -0.95
CCL28-203ENST00000513525 CYP4Z2PQ8N1L4 340 aa9.12□□□□□ -0.95
CCL28-203ENST00000513525 VWA5B2Q8N398 1253 aa9.12□□□□□ -0.95
CCL28-203ENST00000513525 TMEM156Q8N614 296 aa9.12□□□□□ -0.95
CCL28-203ENST00000513525 ACOT4Q8N9L9 421 aa9.12□□□□□ -0.95
CCL28-203ENST00000513525 MORN4Q8NDC4 146 aa9.12□□□□□ -0.95
CCL28-203ENST00000513525 ADCY4Q8NFM4 1077 aa9.12□□□□□ -0.95
CCL28-203ENST00000513525 OR7G3Q8NG95 312 aa9.12□□□□□ -0.95
CCL28-203ENST00000513525 OR14A16Q8NHC5 309 aa9.12□□□□□ -0.95
CCL28-203ENST00000513525 C16orf52Q8NHV5 167 aa9.12□□□□□ -0.95
CCL28-203ENST00000513525 DAZLQ92904 295 aaKnown RBP9.12□□□□□ -0.95
CCL28-203ENST00000513525 VPS33AQ96AX1 596 aa9.12□□□□□ -0.95
CCL28-203ENST00000513525 FCRL1Q96LA6 429 aa9.12□□□□□ -0.95
CCL28-203ENST00000513525 LRGUKQ96M69 825 aa9.12□□□□□ -0.95
CCL28-203ENST00000513525 MAPKAP1Q9BPZ7 522 aa9.12□□□□□ -0.95
CCL28-203ENST00000513525 ECSITQ9BQ95 431 aa9.12□□□□□ -0.95
CCL28-203ENST00000513525 ACPTQ9BZG2 426 aa9.12□□□□□ -0.95
CCL28-203ENST00000513525 DPY30Q9C005 99 aa9.12□□□□□ -0.95
CCL28-203ENST00000513525 TSPAN10Q9H1Z9 355 aaPredicted RBP9.12□□□□□ -0.95
CCL28-203ENST00000513525 BATF3Q9NR55 127 aa9.12□□□□□ -0.95
CCL28-203ENST00000513525 FARSBQ9NSD9 589 aaKnown RBP9.12□□□□□ -0.95
CCL28-203ENST00000513525 CMTM6Q9NX76 183 aa9.12□□□□□ -0.95
CCL28-203ENST00000513525 SH3BGRL2Q9UJC5 107 aa9.12□□□□□ -0.95
CCL28-203ENST00000513525 TINAGQ9UJW2 476 aa9.12□□□□□ -0.95
CCL28-203ENST00000513525 FBXW2Q9UKT8 454 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms