RNA–Protein interactions for RNA: ENST00000513346.5

TCOF1-211, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-211ENST00000513346 PYCR1P32322 319 aa10.68□□□□□ -0.7
TCOF1-211ENST00000513346 RPS19P39019 145 aaKnown RBP10.68□□□□□ -0.7
TCOF1-211ENST00000513346 CCR8P51685 355 aa10.68□□□□□ -0.7
TCOF1-211ENST00000513346 PON3Q15166 354 aa10.68□□□□□ -0.7
TCOF1-211ENST00000513346 POMZP3Q6PJE2 187 aa10.68□□□□□ -0.7
TCOF1-211ENST00000513346 Q6ZSR9 355 aa10.68□□□□□ -0.7
TCOF1-211ENST00000513346 RIMKLAQ8IXN7 391 aa10.68□□□□□ -0.7
TCOF1-211ENST00000513346 TMEM145Q8NBT3 493 aa10.68□□□□□ -0.7
TCOF1-211ENST00000513346 ANKK1Q8NFD2 765 aa10.68□□□□□ -0.7
TCOF1-211ENST00000513346 BEST4Q8NFU0 473 aa10.68□□□□□ -0.7
TCOF1-211ENST00000513346 TCTEX1D2Q8WW35 142 aa10.68□□□□□ -0.7
TCOF1-211ENST00000513346 SLIRPQ9GZT3 109 aaKnown RBP10.68□□□□□ -0.7
TCOF1-211ENST00000513346 LTB4R2Q9NPC1 389 aa10.68□□□□□ -0.7
TCOF1-211ENST00000513346 KLHL9Q9P2J3 617 aa10.68□□□□□ -0.7
TCOF1-211ENST00000513346 A0A1W2PPK0 400 aa10.68□□□□□ -0.7
TCOF1-211ENST00000513346 B3GALT2O43825 422 aa10.68□□□□□ -0.7
TCOF1-211ENST00000513346 SC5DO75845 299 aa10.68□□□□□ -0.7
TCOF1-211ENST00000513346 ACVR1BP36896 505 aa10.68□□□□□ -0.7
TCOF1-211ENST00000513346 DHPSP49366 369 aaPredicted RBP10.68□□□□□ -0.7
TCOF1-211ENST00000513346 WDR5P61964 334 aaKnown RBP10.68□□□□□ -0.7
TCOF1-211ENST00000513346 PSPHP78330 225 aa10.68□□□□□ -0.7
TCOF1-211ENST00000513346 ZNF91Q05481 1191 aa10.68□□□□□ -0.7
TCOF1-211ENST00000513346 TMEM185AQ8NFB2 350 aa10.68□□□□□ -0.7
TCOF1-211ENST00000513346 TTLQ8NG68 377 aa10.68□□□□□ -0.7
TCOF1-211ENST00000513346 OR2T11Q8NH01 316 aa10.68□□□□□ -0.7
TCOF1-211ENST00000513346 C5orf34Q96MH7 638 aa10.68□□□□□ -0.7
TCOF1-211ENST00000513346 GAL3ST4Q96RP7 486 aa10.68□□□□□ -0.7
TCOF1-211ENST00000513346 MFFQ9GZY8 342 aa10.68□□□□□ -0.7
TCOF1-211ENST00000513346 TUBB1Q9H4B7 451 aa10.68□□□□□ -0.7
TCOF1-211ENST00000513346 THSD1Q9NS62 852 aa10.68□□□□□ -0.7
TCOF1-211ENST00000513346 TXNL4BQ9NX01 149 aaKnown RBP10.68□□□□□ -0.7
TCOF1-211ENST00000513346 TAS2R16Q9NYV7 291 aa10.68□□□□□ -0.7
TCOF1-211ENST00000513346 GNG8Q9UK08 70 aa10.68□□□□□ -0.7
TCOF1-211ENST00000513346 SH2B3Q9UQQ2 575 aa10.68□□□□□ -0.7
TCOF1-211ENST00000513346 NAALAD2Q9Y3Q0 740 aa10.68□□□□□ -0.7
TCOF1-211ENST00000513346 ADAMTS7Q9UKP4 1686 aa10.67□□□□□ -0.7
TCOF1-211ENST00000513346 A0A0G2JMP0 313 aa10.67□□□□□ -0.7
TCOF1-211ENST00000513346 PRODHO43272 600 aa10.67□□□□□ -0.7
TCOF1-211ENST00000513346 GTF2F2P13984 249 aa10.67□□□□□ -0.7
TCOF1-211ENST00000513346 CSNK2A2P19784 350 aaPredicted RBP10.67□□□□□ -0.7
TCOF1-211ENST00000513346 MAPK3P27361 379 aaPredicted RBP10.67□□□□□ -0.7
TCOF1-211ENST00000513346 RAB40BQ12829 278 aa10.67□□□□□ -0.7
TCOF1-211ENST00000513346 FAM69AQ5T7M9 428 aa10.67□□□□□ -0.7
TCOF1-211ENST00000513346 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.67□□□□□ -0.7
TCOF1-211ENST00000513346 OR4M2Q8NGB6 313 aa10.67□□□□□ -0.7
TCOF1-211ENST00000513346 OR6F1Q8NGZ6 308 aa10.67□□□□□ -0.7
TCOF1-211ENST00000513346 OR5P2Q8WZ92 322 aa10.67□□□□□ -0.7
TCOF1-211ENST00000513346 SMPDL3AQ92484 453 aa10.67□□□□□ -0.7
TCOF1-211ENST00000513346 RNF167Q9H6Y7 350 aa10.67□□□□□ -0.7
TCOF1-211ENST00000513346 METTL17Q9H7H0 456 aaPredicted RBP10.67□□□□□ -0.7
TCOF1-211ENST00000513346 ACSL6Q9UKU0 697 aa10.67□□□□□ -0.7
TCOF1-211ENST00000513346 C2orf78A6NCI8 922 aa10.67□□□□□ -0.7
TCOF1-211ENST00000513346 ELOA3DA6NLF2 546 aaPredicted RBP10.67□□□□□ -0.7
TCOF1-211ENST00000513346 B4DGG1 531 aa10.67□□□□□ -0.7
TCOF1-211ENST00000513346 SOCS5O75159 536 aa10.67□□□□□ -0.7
TCOF1-211ENST00000513346 ZNF821O75541 412 aaPredicted RBP10.67□□□□□ -0.7
TCOF1-211ENST00000513346 SOX30O94993 753 aa10.67□□□□□ -0.7
TCOF1-211ENST00000513346 FCER2P06734 321 aa10.67□□□□□ -0.7
TCOF1-211ENST00000513346 RAB3AP20336 220 aa10.67□□□□□ -0.7
TCOF1-211ENST00000513346 MPIP34949 423 aa10.67□□□□□ -0.7
TCOF1-211ENST00000513346 ZXDBP98169 803 aa10.67□□□□□ -0.7
TCOF1-211ENST00000513346 ELOA3BQ3SY89 546 aa10.67□□□□□ -0.7
TCOF1-211ENST00000513346 PKDCCQ504Y2 493 aa10.67□□□□□ -0.7
TCOF1-211ENST00000513346 SLC44A3Q8N4M1 653 aa10.67□□□□□ -0.7
TCOF1-211ENST00000513346 TTC9BQ8N6N2 239 aa10.67□□□□□ -0.7
TCOF1-211ENST00000513346 POGLUT1Q8NBL1 392 aa10.67□□□□□ -0.7
TCOF1-211ENST00000513346 ELOA3Q8NG57 546 aa10.67□□□□□ -0.7
TCOF1-211ENST00000513346 NKD1Q969G9 470 aa10.67□□□□□ -0.7
TCOF1-211ENST00000513346 FCRL1Q96LA6 429 aa10.67□□□□□ -0.7
TCOF1-211ENST00000513346 BTNL2Q9UIR0 455 aa10.67□□□□□ -0.7
TCOF1-211ENST00000513346 NDRG4Q9ULP0 352 aaKnown RBP10.67□□□□□ -0.7
TCOF1-211ENST00000513346 F5P12259 2224 aa10.67□□□□□ -0.7
TCOF1-211ENST00000513346 A8MUA0 341 aa10.67□□□□□ -0.7
TCOF1-211ENST00000513346 B4DXG7 233 aa10.67□□□□□ -0.7
TCOF1-211ENST00000513346 STC2O76061 302 aa10.67□□□□□ -0.7
TCOF1-211ENST00000513346 CD3GP09693 182 aa10.67□□□□□ -0.7
TCOF1-211ENST00000513346 PTPN6P29350 595 aa10.67□□□□□ -0.7
TCOF1-211ENST00000513346 BMP8BP34820 402 aa10.67□□□□□ -0.7
TCOF1-211ENST00000513346 MASP1P48740 699 aa10.67□□□□□ -0.7
TCOF1-211ENST00000513346 RAP2BP61225 183 aa10.67□□□□□ -0.7
TCOF1-211ENST00000513346 SOWAHCQ53LP3 525 aaPredicted RBP10.67□□□□□ -0.7
TCOF1-211ENST00000513346 TOR2AQ5JU69 321 aa10.67□□□□□ -0.7
TCOF1-211ENST00000513346 DLEU7Q6UYE1 221 aa10.67□□□□□ -0.7
TCOF1-211ENST00000513346 ZNF783Q6ZMS7 281 aa10.67□□□□□ -0.7
TCOF1-211ENST00000513346 BMP8AQ7Z5Y6 402 aa10.67□□□□□ -0.7
TCOF1-211ENST00000513346 GTPBP8Q8N3Z3 284 aaPredicted RBP10.67□□□□□ -0.7
TCOF1-211ENST00000513346 BBS10Q8TAM1 723 aa10.67□□□□□ -0.7
TCOF1-211ENST00000513346 RGMAQ96B86 450 aa10.67□□□□□ -0.7
TCOF1-211ENST00000513346 CSF3RQ99062 836 aa10.67□□□□□ -0.7
TCOF1-211ENST00000513346 FN3KQ9H479 309 aa10.67□□□□□ -0.7
TCOF1-211ENST00000513346 KCNK6Q9Y257 313 aa10.67□□□□□ -0.7
TCOF1-211ENST00000513346 GPR52Q9Y2T5 361 aa10.67□□□□□ -0.7
TCOF1-211ENST00000513346 HYKKA2RU49 373 aa10.67□□□□□ -0.7
TCOF1-211ENST00000513346 CACNG3O60359 315 aa10.67□□□□□ -0.7
TCOF1-211ENST00000513346 BTG1P62324 171 aa10.67□□□□□ -0.7
TCOF1-211ENST00000513346 LMAN2Q12907 356 aa10.67□□□□□ -0.7
TCOF1-211ENST00000513346 METTL2BQ6P1Q9 378 aaKnown RBP10.67□□□□□ -0.7
TCOF1-211ENST00000513346 ZCCHC12Q6PEW1 402 aa10.67□□□□□ -0.7
TCOF1-211ENST00000513346 CHRDL2Q6WN34 429 aa10.67□□□□□ -0.7
TCOF1-211ENST00000513346 OR52P1PQ8NH57 321 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms