RNA–Protein interactions for RNA: ENST00000512707.1

PFDN1-204, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-204ENST00000512707 PIGUQ9H490 435 aa10.09□□□□□ -0.79
PFDN1-204ENST00000512707 IKZF5Q9H5V7 419 aa10.09□□□□□ -0.79
PFDN1-204ENST00000512707 PIF1Q9H611 641 aa10.09□□□□□ -0.79
PFDN1-204ENST00000512707 TMEM38AQ9H6F2 299 aa10.09□□□□□ -0.79
PFDN1-204ENST00000512707 TRIM45Q9H8W5 580 aaPredicted RBP10.09□□□□□ -0.79
PFDN1-204ENST00000512707 ANKRA2Q9H9E1 313 aa10.09□□□□□ -0.79
PFDN1-204ENST00000512707 A4GALTQ9NPC4 353 aa10.09□□□□□ -0.79
PFDN1-204ENST00000512707 P4HTMQ9NXG6 502 aa10.09□□□□□ -0.79
PFDN1-204ENST00000512707 FBXL4Q9UKA2 621 aa10.09□□□□□ -0.79
PFDN1-204ENST00000512707 SNX13Q9Y5W8 968 aa10.09□□□□□ -0.79
PFDN1-204ENST00000512707 FER1L5A0AVI2 2057 aa10.09□□□□□ -0.79
PFDN1-204ENST00000512707 SDK2Q58EX2 2172 aa10.09□□□□□ -0.79
PFDN1-204ENST00000512707 DMXL2Q8TDJ6 3036 aa10.09□□□□□ -0.79
PFDN1-204ENST00000512707 DSPP15924 2871 aaKnown RBP10.08□□□□□ -0.8
PFDN1-204ENST00000512707 WDFY3Q8IZQ1 3526 aa10.08□□□□□ -0.8
PFDN1-204ENST00000512707 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.08□□□□□ -0.8
PFDN1-204ENST00000512707 TRBV11-1A0A0K0K1C0 115 aa10.08□□□□□ -0.8
PFDN1-204ENST00000512707 ZNF891A8MT65 544 aaPredicted RBP10.08□□□□□ -0.8
PFDN1-204ENST00000512707 H0YHG0 523 aa10.08□□□□□ -0.8
PFDN1-204ENST00000512707 HRKO00198 91 aa10.08□□□□□ -0.8
PFDN1-204ENST00000512707 HMGN4O00479 90 aa10.08□□□□□ -0.8
PFDN1-204ENST00000512707 ACOX3O15254 700 aa10.08□□□□□ -0.8
PFDN1-204ENST00000512707 SLC28A2O43868 658 aa10.08□□□□□ -0.8
PFDN1-204ENST00000512707 TNFRSF21O75509 655 aa10.08□□□□□ -0.8
PFDN1-204ENST00000512707 ZFAND5O76080 213 aa10.08□□□□□ -0.8
PFDN1-204ENST00000512707 PDE9AO76083 593 aa10.08□□□□□ -0.8
PFDN1-204ENST00000512707 IFNA14P01570 189 aa10.08□□□□□ -0.8
PFDN1-204ENST00000512707 OR12D1P0DN82 309 aa10.08□□□□□ -0.8
PFDN1-204ENST00000512707 COX6A1P12074 109 aa10.08□□□□□ -0.8
PFDN1-204ENST00000512707 BMP2P12643 396 aa10.08□□□□□ -0.8
PFDN1-204ENST00000512707 ATP6V1C1P21283 382 aa10.08□□□□□ -0.8
PFDN1-204ENST00000512707 F8A1P23610 371 aa10.08□□□□□ -0.8
PFDN1-204ENST00000512707 GABRA3P34903 492 aa10.08□□□□□ -0.8
PFDN1-204ENST00000512707 PCGF2P35227 344 aa10.08□□□□□ -0.8
PFDN1-204ENST00000512707 PPICP45877 212 aa10.08□□□□□ -0.8
PFDN1-204ENST00000512707 MVDP53602 400 aa10.08□□□□□ -0.8
PFDN1-204ENST00000512707 PSMD4P55036 377 aaKnown RBP10.08□□□□□ -0.8
PFDN1-204ENST00000512707 RRADP55042 308 aa10.08□□□□□ -0.8
PFDN1-204ENST00000512707 KCNJ2P63252 427 aa10.08□□□□□ -0.8
PFDN1-204ENST00000512707 POU6F2P78424 691 aaPredicted RBP10.08□□□□□ -0.8
PFDN1-204ENST00000512707 CDK6Q00534 326 aa10.08□□□□□ -0.8
PFDN1-204ENST00000512707 TRAP1Q12931 704 aaKnown RBP10.08□□□□□ -0.8
PFDN1-204ENST00000512707 SCARB2Q14108 478 aa10.08□□□□□ -0.8
PFDN1-204ENST00000512707 VEZF1Q14119 521 aa10.08□□□□□ -0.8
PFDN1-204ENST00000512707 FLOT2Q14254 428 aa10.08□□□□□ -0.8
PFDN1-204ENST00000512707 TRIM25Q14258 630 aaKnown RBP10.08□□□□□ -0.8
PFDN1-204ENST00000512707 TGIF1Q15583 401 aa10.08□□□□□ -0.8
PFDN1-204ENST00000512707 VMACQ2NL98 169 aa10.08□□□□□ -0.8
PFDN1-204ENST00000512707 GPAT3Q53EU6 434 aa10.08□□□□□ -0.8
PFDN1-204ENST00000512707 REEP3Q6NUK4 255 aa10.08□□□□□ -0.8
PFDN1-204ENST00000512707 GPR155Q7Z3F1 870 aa10.08□□□□□ -0.8
PFDN1-204ENST00000512707 CALHM3Q86XJ0 350 aa10.08□□□□□ -0.8
PFDN1-204ENST00000512707 PROSER1Q86XN7 944 aa10.08□□□□□ -0.8
PFDN1-204ENST00000512707 HPS6Q86YV9 775 aa10.08□□□□□ -0.8
PFDN1-204ENST00000512707 SLC44A2Q8IWA5 706 aaPredicted RBP10.08□□□□□ -0.8
PFDN1-204ENST00000512707 TAGAPQ8N103 731 aa10.08□□□□□ -0.8
PFDN1-204ENST00000512707 CLEC1AQ8NC01 280 aa10.08□□□□□ -0.8
PFDN1-204ENST00000512707 SLC16A11Q8NCK7 471 aa10.08□□□□□ -0.8
PFDN1-204ENST00000512707 HIPK4Q8NE63 616 aa10.08□□□□□ -0.8
PFDN1-204ENST00000512707 C17orf47Q8NEP4 570 aa10.08□□□□□ -0.8
PFDN1-204ENST00000512707 NFAM1Q8NET5 270 aaPredicted RBP10.08□□□□□ -0.8
PFDN1-204ENST00000512707 OR5D16Q8NGK9 328 aa10.08□□□□□ -0.8
PFDN1-204ENST00000512707 THAP4Q8WY91 577 aa10.08□□□□□ -0.8
PFDN1-204ENST00000512707 RAB8BQ92930 207 aa10.08□□□□□ -0.8
PFDN1-204ENST00000512707 GIMAP5Q96F15 307 aa10.08□□□□□ -0.8
PFDN1-204ENST00000512707 C16orf58Q96GQ5 468 aa10.08□□□□□ -0.8
PFDN1-204ENST00000512707 CLPTM1LQ96KA5 538 aa10.08□□□□□ -0.8
PFDN1-204ENST00000512707 VSTM2LQ96N03 204 aa10.08□□□□□ -0.8
PFDN1-204ENST00000512707 ZNF583Q96ND8 569 aa10.08□□□□□ -0.8
PFDN1-204ENST00000512707 BTBD9Q96Q07 612 aa10.08□□□□□ -0.8
PFDN1-204ENST00000512707 ZNF607Q96SK3 696 aa10.08□□□□□ -0.8
PFDN1-204ENST00000512707 KCNK17Q96T54 332 aa10.08□□□□□ -0.8
PFDN1-204ENST00000512707 WDR77Q9BQA1 342 aaPredicted RBP10.08□□□□□ -0.8
PFDN1-204ENST00000512707 G6PC3Q9BUM1 346 aa10.08□□□□□ -0.8
PFDN1-204ENST00000512707 SPATA5L1Q9BVQ7 753 aa10.08□□□□□ -0.8
PFDN1-204ENST00000512707 NUDT9Q9BW91 350 aa10.08□□□□□ -0.8
PFDN1-204ENST00000512707 BTBD2Q9BX70 525 aa10.08□□□□□ -0.8
PFDN1-204ENST00000512707 ITPAQ9BY32 194 aa10.08□□□□□ -0.8
PFDN1-204ENST00000512707 DEFB126Q9BYW3 111 aa10.08□□□□□ -0.8
PFDN1-204ENST00000512707 SEMA4CQ9C0C4 833 aa10.08□□□□□ -0.8
PFDN1-204ENST00000512707 WWTR1Q9GZV5 400 aa10.08□□□□□ -0.8
PFDN1-204ENST00000512707 CCDC86Q9H6F5 360 aaKnown RBP10.08□□□□□ -0.8
PFDN1-204ENST00000512707 ZNF160Q9HCG1 818 aa10.08□□□□□ -0.8
PFDN1-204ENST00000512707 MMP25Q9NPA2 562 aa10.08□□□□□ -0.8
PFDN1-204ENST00000512707 CD300AQ9UGN4 299 aa10.08□□□□□ -0.8
PFDN1-204ENST00000512707 IL17BQ9UHF5 180 aa10.08□□□□□ -0.8
PFDN1-204ENST00000512707 SEC16AO15027 2179 aa10.08□□□□□ -0.8
PFDN1-204ENST00000512707 CDC14CA4D256 554 aa10.07□□□□□ -0.8
PFDN1-204ENST00000512707 FRG2CA6NGY1 282 aa10.07□□□□□ -0.8
PFDN1-204ENST00000512707 RRP8O43159 456 aaKnown RBP10.07□□□□□ -0.8
PFDN1-204ENST00000512707 NKX2-2O95096 273 aa10.07□□□□□ -0.8
PFDN1-204ENST00000512707 BCHEP06276 602 aa10.07□□□□□ -0.8
PFDN1-204ENST00000512707 ARAFP10398 606 aa10.07□□□□□ -0.8
PFDN1-204ENST00000512707 ACP2P11117 423 aa10.07□□□□□ -0.8
PFDN1-204ENST00000512707 DRD5P21918 477 aa10.07□□□□□ -0.8
PFDN1-204ENST00000512707 TRHRP34981 398 aaPredicted RBP10.07□□□□□ -0.8
PFDN1-204ENST00000512707 MAN2A2P49641 1150 aa10.07□□□□□ -0.8
PFDN1-204ENST00000512707 TMED10P49755 219 aaKnown RBP10.07□□□□□ -0.8
PFDN1-204ENST00000512707 RNF4P78317 190 aa10.07□□□□□ -0.8
PFDN1-204ENST00000512707 MRPS22P82650 360 aaKnown RBP10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms