RNA–Protein interactions for RNA: ENST00000512340.5

NR1I3-231, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 891 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-231ENST00000512340 COQ8BQ96D53 544 aa6.9□□□□□ -1.3
NR1I3-231ENST00000512340 SNRNP40Q96DI7 357 aaKnown RBP6.9□□□□□ -1.3
NR1I3-231ENST00000512340 MAGED4Q96JG8 741 aa6.9□□□□□ -1.3
NR1I3-231ENST00000512340 C3orf30Q96M34 536 aa6.9□□□□□ -1.3
NR1I3-231ENST00000512340 RILPQ96NA2 401 aa6.9□□□□□ -1.3
NR1I3-231ENST00000512340 BTBD9Q96Q07 612 aa6.9□□□□□ -1.3
NR1I3-231ENST00000512340 DOHHQ9BU89 302 aa6.9□□□□□ -1.3
NR1I3-231ENST00000512340 G6PC3Q9BUM1 346 aa6.9□□□□□ -1.3
NR1I3-231ENST00000512340 CCDC28BQ9BUN5 200 aa6.9□□□□□ -1.3
NR1I3-231ENST00000512340 GLIPR2Q9H4G4 154 aa6.9□□□□□ -1.3
NR1I3-231ENST00000512340 METTL7AQ9H8H3 244 aa6.9□□□□□ -1.3
NR1I3-231ENST00000512340 ZNF395Q9H8N7 513 aaPredicted RBP6.9□□□□□ -1.3
NR1I3-231ENST00000512340 CACYBPQ9HB71 228 aaKnown RBP6.9□□□□□ -1.3
NR1I3-231ENST00000512340 TCF7L2Q9NQB0 619 aa6.9□□□□□ -1.3
NR1I3-231ENST00000512340 ZCCHC3Q9NUD5 404 aaKnown RBP6.9□□□□□ -1.3
NR1I3-231ENST00000512340 TMEM45AQ9NWC5 275 aa6.9□□□□□ -1.3
NR1I3-231ENST00000512340 ZIM2Q9NZV7 527 aa6.9□□□□□ -1.3
NR1I3-231ENST00000512340 LUZP4Q9P127 313 aa6.9□□□□□ -1.3
NR1I3-231ENST00000512340 ZNF639Q9UID6 485 aa6.9□□□□□ -1.3
NR1I3-231ENST00000512340 DOPEY2Q9Y3R5 2298 aa6.9□□□□□ -1.31
NR1I3-231ENST00000512340 UNC79Q9P2D8 2635 aa6.9□□□□□ -1.31
NR1I3-231ENST00000512340 TEX15Q9BXT5 2789 aa6.9□□□□□ -1.31
NR1I3-231ENST00000512340 NOTCH2Q04721 2471 aa6.89□□□□□ -1.31
NR1I3-231ENST00000512340 FLNCQ14315 2725 aa6.89□□□□□ -1.31
NR1I3-231ENST00000512340 ANKUB1A6NFN9 424 aa6.89□□□□□ -1.31
NR1I3-231ENST00000512340 H3BNH8 94 aa6.89□□□□□ -1.31
NR1I3-231ENST00000512340 RNASET2O00584 256 aaKnown RBP6.89□□□□□ -1.31
NR1I3-231ENST00000512340 SDHDO14521 159 aa6.89□□□□□ -1.31
NR1I3-231ENST00000512340 PPM1BO75688 479 aa6.89□□□□□ -1.31
NR1I3-231ENST00000512340 SASH3O75995 380 aa6.89□□□□□ -1.31
NR1I3-231ENST00000512340 NEURL1O76050 574 aa6.89□□□□□ -1.31
NR1I3-231ENST00000512340 ANP32DO95626 131 aa6.89□□□□□ -1.31
NR1I3-231ENST00000512340 CBX7O95931 251 aa6.89□□□□□ -1.31
NR1I3-231ENST00000512340 AK1P00568 194 aa6.89□□□□□ -1.31
NR1I3-231ENST00000512340 CT62P0C5K7 136 aa6.89□□□□□ -1.31
NR1I3-231ENST00000512340 ATP6V1C1P21283 382 aa6.89□□□□□ -1.31
NR1I3-231ENST00000512340 ELAVL4P26378 380 aaKnown RBP6.89□□□□□ -1.31
NR1I3-231ENST00000512340 ABCD3P28288 659 aa6.89□□□□□ -1.31
NR1I3-231ENST00000512340 SOAT1P35610 550 aa6.89□□□□□ -1.31
NR1I3-231ENST00000512340 CHI3L1P36222 383 aaPredicted RBP6.89□□□□□ -1.31
NR1I3-231ENST00000512340 MC3RP41968 323 aa6.89□□□□□ -1.31
NR1I3-231ENST00000512340 CD97P48960 835 aa6.89□□□□□ -1.31
NR1I3-231ENST00000512340 CCT3P49368 545 aaKnown RBP6.89□□□□□ -1.31
NR1I3-231ENST00000512340 MEOX1P50221 254 aa6.89□□□□□ -1.31
NR1I3-231ENST00000512340 EMDP50402 254 aa6.89□□□□□ -1.31
NR1I3-231ENST00000512340 AQP5P55064 265 aa6.89□□□□□ -1.31
NR1I3-231ENST00000512340 KCNK10P57789 538 aa6.89□□□□□ -1.31
NR1I3-231ENST00000512340 FOXK1P85037 733 aa6.89□□□□□ -1.31
NR1I3-231ENST00000512340 EXOSC7Q15024 291 aaKnown RBP6.89□□□□□ -1.31
NR1I3-231ENST00000512340 SF3B4Q15427 424 aaKnown RBP eCLIP6.89□□□□□ -1.31
NR1I3-231ENST00000512340 LTB4RQ15722 352 aa6.89□□□□□ -1.31
NR1I3-231ENST00000512340 NTRK2Q16620 822 aa6.89□□□□□ -1.31
NR1I3-231ENST00000512340 ZNF791Q3KP31 576 aaPredicted RBP6.89□□□□□ -1.31
NR1I3-231ENST00000512340 PDCD4Q53EL6 469 aaKnown RBP6.89□□□□□ -1.31
NR1I3-231ENST00000512340 ATAD3BQ5T9A4 648 aa6.89□□□□□ -1.31
NR1I3-231ENST00000512340 METTL21CQ5VZV1 264 aa6.89□□□□□ -1.31
NR1I3-231ENST00000512340 SLC30A6Q6NXT4 461 aa6.89□□□□□ -1.31
NR1I3-231ENST00000512340 EPGNQ6UW88 154 aa6.89□□□□□ -1.31
NR1I3-231ENST00000512340 GFRALQ6UXV0 394 aa6.89□□□□□ -1.31
NR1I3-231ENST00000512340 DGAT2L6Q6ZPD8 337 aa6.89□□□□□ -1.31
NR1I3-231ENST00000512340 MSANTD1Q6ZTZ1 278 aa6.89□□□□□ -1.31
NR1I3-231ENST00000512340 ZNF551Q7Z340 670 aaPredicted RBP6.89□□□□□ -1.31
NR1I3-231ENST00000512340 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.89□□□□□ -1.31
NR1I3-231ENST00000512340 MMP21Q8N119 569 aa6.89□□□□□ -1.31
NR1I3-231ENST00000512340 GHDCQ8N2G8 530 aa6.89□□□□□ -1.31
NR1I3-231ENST00000512340 FBXW8Q8N3Y1 598 aa6.89□□□□□ -1.31
NR1I3-231ENST00000512340 ZNF321PQ8N8H1 164 aa6.89□□□□□ -1.31
NR1I3-231ENST00000512340 ST6GALNAC3Q8NDV1 305 aa6.89□□□□□ -1.31
NR1I3-231ENST00000512340 OR7G2Q8NG99 324 aa6.89□□□□□ -1.31
NR1I3-231ENST00000512340 OR7A2PQ8NGA2 310 aa6.89□□□□□ -1.31
NR1I3-231ENST00000512340 OR8J2Q8NGG1 315 aa6.89□□□□□ -1.31
NR1I3-231ENST00000512340 GPR151Q8TDV0 419 aa6.89□□□□□ -1.31
NR1I3-231ENST00000512340 ADAMTS15Q8TE58 950 aa6.89□□□□□ -1.31
NR1I3-231ENST00000512340 PAQR8Q8TEZ7 354 aa6.89□□□□□ -1.31
NR1I3-231ENST00000512340 JADE3Q92613 823 aa6.89□□□□□ -1.31
NR1I3-231ENST00000512340 UCN3Q969E3 161 aa6.89□□□□□ -1.31
NR1I3-231ENST00000512340 ADIPOR1Q96A54 375 aa6.89□□□□□ -1.31
NR1I3-231ENST00000512340 MAELQ96JY0 434 aaKnown RBP6.89□□□□□ -1.31
NR1I3-231ENST00000512340 ZNF597Q96LX8 424 aa6.89□□□□□ -1.31
NR1I3-231ENST00000512340 COL21A1Q96P44 957 aa6.89□□□□□ -1.31
NR1I3-231ENST00000512340 SIGLEC12Q96PQ1 595 aa6.89□□□□□ -1.31
NR1I3-231ENST00000512340 ITPAQ9BY32 194 aa6.89□□□□□ -1.31
NR1I3-231ENST00000512340 C20orf27Q9GZN8 174 aa6.89□□□□□ -1.31
NR1I3-231ENST00000512340 NSRP1Q9H0G5 558 aaKnown RBP6.89□□□□□ -1.31
NR1I3-231ENST00000512340 WDR55Q9H6Y2 383 aaPredicted RBP6.89□□□□□ -1.31
NR1I3-231ENST00000512340 EXO5Q9H790 373 aa6.89□□□□□ -1.31
NR1I3-231ENST00000512340 LIN28AQ9H9Z2 209 aaKnown RBP6.89□□□□□ -1.31
NR1I3-231ENST00000512340 IL1RL2Q9HB29 575 aa6.89□□□□□ -1.31
NR1I3-231ENST00000512340 FOLH1BQ9HBA9 442 aa6.89□□□□□ -1.31
NR1I3-231ENST00000512340 EXD2Q9NVH0 621 aa6.89□□□□□ -1.31
NR1I3-231ENST00000512340 ASF1BQ9NVP2 202 aa6.89□□□□□ -1.31
NR1I3-231ENST00000512340 AIG1Q9NVV5 245 aa6.89□□□□□ -1.31
NR1I3-231ENST00000512340 KLRF1Q9NZS2 232 aa6.89□□□□□ -1.31
NR1I3-231ENST00000512340 STOML1Q9UBI4 398 aa6.89□□□□□ -1.31
NR1I3-231ENST00000512340 SEC14L3Q9UDX4 400 aa6.89□□□□□ -1.31
NR1I3-231ENST00000512340 GIMAP2Q9UG22 337 aa6.89□□□□□ -1.31
NR1I3-231ENST00000512340 ZNF223Q9UK11 482 aaPredicted RBP6.89□□□□□ -1.31
NR1I3-231ENST00000512340 CBLCQ9ULV8 474 aa6.89□□□□□ -1.31
NR1I3-231ENST00000512340 GPR55Q9Y2T6 319 aaPredicted RBP6.89□□□□□ -1.31
NR1I3-231ENST00000512340 CPAMD8Q8IZJ3 1885 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms