RNA–Protein interactions for RNA: ENST00000512055.5

CPNE4-209, Transcript of copine 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CPNE4, Length 5,431 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-209ENST00000512055 YIPF4Q9BSR8 244 aa10.31□□□□□ -0.76
CPNE4-209ENST00000512055 GRXCR2A6NFK2 248 aa10.31□□□□□ -0.76
CPNE4-209ENST00000512055 POM121CA8CG34 1229 aa10.31□□□□□ -0.76
CPNE4-209ENST00000512055 TAS2R50P59544 299 aa10.31□□□□□ -0.76
CPNE4-209ENST00000512055 GRB2P62993 217 aaKnown RBP10.31□□□□□ -0.76
CPNE4-209ENST00000512055 PEA15Q15121 130 aa10.31□□□□□ -0.76
CPNE4-209ENST00000512055 PLEKHS1Q5SXH7 462 aa10.31□□□□□ -0.76
CPNE4-209ENST00000512055 BCL2L15Q5TBC7 163 aa10.31□□□□□ -0.76
CPNE4-209ENST00000512055 PXDC1Q5TGL8 231 aa10.31□□□□□ -0.76
CPNE4-209ENST00000512055 TMPRSS7Q7RTY8 843 aa10.31□□□□□ -0.76
CPNE4-209ENST00000512055 P4HA3Q7Z4N8 544 aa10.31□□□□□ -0.76
CPNE4-209ENST00000512055 MCATQ8IVS2 390 aaKnown RBP10.31□□□□□ -0.76
CPNE4-209ENST00000512055 TCEANCQ8N8B7 351 aa10.31□□□□□ -0.76
CPNE4-209ENST00000512055 OCSTAMPQ9BR26 566 aa10.31□□□□□ -0.76
CPNE4-209ENST00000512055 NPIPA5A0A0B4J1W7 369 aa10.31□□□□□ -0.76
CPNE4-209ENST00000512055 URADA6NGE7 173 aa10.31□□□□□ -0.76
CPNE4-209ENST00000512055 MROH6A6NGR9 719 aa10.31□□□□□ -0.76
CPNE4-209ENST00000512055 VIPP01282 170 aa10.31□□□□□ -0.76
CPNE4-209ENST00000512055 QSER1Q2KHR3 1735 aa10.31□□□□□ -0.76
CPNE4-209ENST00000512055 TMEM69Q5SWH9 247 aa10.31□□□□□ -0.76
CPNE4-209ENST00000512055 SFRP4Q6FHJ7 346 aaPredicted RBP10.31□□□□□ -0.76
CPNE4-209ENST00000512055 LRRTM4Q86VH4 590 aa10.31□□□□□ -0.76
CPNE4-209ENST00000512055 DNAJB8Q8NHS0 232 aa10.31□□□□□ -0.76
CPNE4-209ENST00000512055 ZNF596Q8TC21 504 aa10.31□□□□□ -0.76
CPNE4-209ENST00000512055 HAS2Q92819 552 aa10.31□□□□□ -0.76
CPNE4-209ENST00000512055 OTUB2Q96DC9 234 aa10.31□□□□□ -0.76
CPNE4-209ENST00000512055 LMLNQ96KR4 655 aa10.31□□□□□ -0.76
CPNE4-209ENST00000512055 CACNG6Q9BXT2 260 aa10.31□□□□□ -0.76
CPNE4-209ENST00000512055 SLC46A2Q9BY10 475 aa10.31□□□□□ -0.76
CPNE4-209ENST00000512055 CARS2Q9HA77 564 aaKnown RBP10.31□□□□□ -0.76
CPNE4-209ENST00000512055 CCM2LQ9NUG4 571 aaPredicted RBP10.31□□□□□ -0.76
CPNE4-209ENST00000512055 GLTPQ9NZD2 209 aa10.31□□□□□ -0.76
CPNE4-209ENST00000512055 ACSL6Q9UKU0 697 aa10.31□□□□□ -0.76
CPNE4-209ENST00000512055 LOC100130705A0A1B0GUX0 176 aa10.31□□□□□ -0.76
CPNE4-209ENST00000512055 PPP1R2P9O14990 202 aa10.31□□□□□ -0.76
CPNE4-209ENST00000512055 ARNTP27540 789 aa10.31□□□□□ -0.76
CPNE4-209ENST00000512055 TAGLNQ01995 201 aaKnown RBP10.31□□□□□ -0.76
CPNE4-209ENST00000512055 MBTPS1Q14703 1052 aa10.31□□□□□ -0.76
CPNE4-209ENST00000512055 PAGE3Q5JUK9 113 aa10.31□□□□□ -0.76
CPNE4-209ENST00000512055 SERPINA12Q8IW75 414 aa10.31□□□□□ -0.76
CPNE4-209ENST00000512055 MINDY1Q8N5J2 469 aa10.31□□□□□ -0.76
CPNE4-209ENST00000512055 OR4C5Q8NGB2 326 aa10.31□□□□□ -0.76
CPNE4-209ENST00000512055 PAQR8Q8TEZ7 354 aa10.31□□□□□ -0.76
CPNE4-209ENST00000512055 NDC1Q9BTX1 674 aa10.31□□□□□ -0.76
CPNE4-209ENST00000512055 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.31□□□□□ -0.76
CPNE4-209ENST00000512055 WASF3Q9UPY6 502 aa10.31□□□□□ -0.76
CPNE4-209ENST00000512055 SLC19A2O60779 497 aa10.3□□□□□ -0.76
CPNE4-209ENST00000512055 TMEM127O75204 238 aa10.3□□□□□ -0.76
CPNE4-209ENST00000512055 RFPL3O75679 317 aa10.3□□□□□ -0.76
CPNE4-209ENST00000512055 GSRP00390 522 aa10.3□□□□□ -0.76
CPNE4-209ENST00000512055 ADAP00813 363 aa10.3□□□□□ -0.76
CPNE4-209ENST00000512055 HOXC13P31276 330 aa10.3□□□□□ -0.76
CPNE4-209ENST00000512055 SCARB2Q14108 478 aa10.3□□□□□ -0.76
CPNE4-209ENST00000512055 RAB39AQ14964 217 aa10.3□□□□□ -0.76
CPNE4-209ENST00000512055 DHCR24Q15392 516 aa10.3□□□□□ -0.76
CPNE4-209ENST00000512055 SPIN4Q56A73 249 aa10.3□□□□□ -0.76
CPNE4-209ENST00000512055 TMIGD1Q6UXZ0 262 aa10.3□□□□□ -0.76
CPNE4-209ENST00000512055 PACRGLQ8N7B6 248 aa10.3□□□□□ -0.76
CPNE4-209ENST00000512055 TMEM145Q8NBT3 493 aa10.3□□□□□ -0.76
CPNE4-209ENST00000512055 OR2A12Q8NGT7 310 aa10.3□□□□□ -0.76
CPNE4-209ENST00000512055 SHKBP1Q8TBC3 707 aa10.3□□□□□ -0.76
CPNE4-209ENST00000512055 ATOH8Q96SQ7 321 aa10.3□□□□□ -0.76
CPNE4-209ENST00000512055 TIMM29Q9BSF4 260 aa10.3□□□□□ -0.76
CPNE4-209ENST00000512055 GCM1Q9NP62 436 aa10.3□□□□□ -0.76
CPNE4-209ENST00000512055 PAK1IP1Q9NWT1 392 aaPredicted RBP10.3□□□□□ -0.76
CPNE4-209ENST00000512055 USP36Q9P275 1121 aaKnown RBP10.3□□□□□ -0.76
CPNE4-209ENST00000512055 NDRG2Q9UN36 371 aaKnown RBP10.3□□□□□ -0.76
CPNE4-209ENST00000512055 COLEC10Q9Y6Z7 277 aa10.3□□□□□ -0.76
CPNE4-209ENST00000512055 ANKUB1A6NFN9 424 aa10.3□□□□□ -0.76
CPNE4-209ENST00000512055 B4GALT3O60512 393 aa10.3□□□□□ -0.76
CPNE4-209ENST00000512055 CIDEAO60543 219 aa10.3□□□□□ -0.76
CPNE4-209ENST00000512055 ZNF8P17098 575 aaPredicted RBP10.3□□□□□ -0.76
CPNE4-209ENST00000512055 GRK6P43250 576 aa10.3□□□□□ -0.76
CPNE4-209ENST00000512055 SLC6A9P48067 706 aa10.3□□□□□ -0.76
CPNE4-209ENST00000512055 LARP4Q71RC2 724 aaKnown RBP eCLIP10.3□□□□□ -0.76
CPNE4-209ENST00000512055 LGI4Q8N135 537 aa10.3□□□□□ -0.76
CPNE4-209ENST00000512055 YIPF7Q8N8F6 280 aa10.3□□□□□ -0.76
CPNE4-209ENST00000512055 TSTD1Q8NFU3 115 aa10.3□□□□□ -0.76
CPNE4-209ENST00000512055 TSPEARQ8WU66 669 aa10.3□□□□□ -0.76
CPNE4-209ENST00000512055 UBXN10Q96LJ8 280 aa10.3□□□□□ -0.76
CPNE4-209ENST00000512055 IL17FQ96PD4 163 aa10.3□□□□□ -0.76
CPNE4-209ENST00000512055 SDR39U1Q9NRG7 319 aaPredicted RBP10.3□□□□□ -0.76
CPNE4-209ENST00000512055 PCDHGB2Q9Y5G2 931 aa10.3□□□□□ -0.76
CPNE4-209ENST00000512055 TRAV20A0A0B4J274 112 aa10.3□□□□□ -0.76
CPNE4-209ENST00000512055 UBFD1O14562 309 aaKnown RBP10.3□□□□□ -0.76
CPNE4-209ENST00000512055 EEDO75530 441 aaKnown RBP10.3□□□□□ -0.76
CPNE4-209ENST00000512055 FGF4P08620 206 aa10.3□□□□□ -0.76
CPNE4-209ENST00000512055 DRD5P21918 477 aa10.3□□□□□ -0.76
CPNE4-209ENST00000512055 GRIA2P42262 883 aa10.3□□□□□ -0.76
CPNE4-209ENST00000512055 KCNC1P48547 511 aa10.3□□□□□ -0.76
CPNE4-209ENST00000512055 WDR5P61964 334 aaKnown RBP10.3□□□□□ -0.76
CPNE4-209ENST00000512055 HNRNPKP61978 463 aaKnown RBP eCLIP10.3□□□□□ -0.76
CPNE4-209ENST00000512055 ABHD18Q0P651 414 aa10.3□□□□□ -0.76
CPNE4-209ENST00000512055 ST3GAL4Q11206 333 aa10.3□□□□□ -0.76
CPNE4-209ENST00000512055 MLIPQ5VWP3 458 aa10.3□□□□□ -0.76
CPNE4-209ENST00000512055 OR2T5Q6IEZ7 315 aa10.3□□□□□ -0.76
CPNE4-209ENST00000512055 GSG1LQ6UXU4 331 aa10.3□□□□□ -0.76
CPNE4-209ENST00000512055 OR2T29Q8NH02 315 aa10.3□□□□□ -0.76
CPNE4-209ENST00000512055 ACOT11Q8WXI4 607 aaPredicted RBP10.3□□□□□ -0.76
CPNE4-209ENST00000512055 CNOT9Q92600 299 aaKnown RBP10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms