RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 CRYABP02511 175 aaKnown RBP4.72□□□□□ -1.65
TRAPPC11-208ENST00000511955 C4BPAP04003 597 aaKnown RBP4.72□□□□□ -1.65
TRAPPC11-208ENST00000511955 ALDOAP04075 364 aaKnown RBP4.72□□□□□ -1.65
TRAPPC11-208ENST00000511955 PROS1P07225 676 aa4.72□□□□□ -1.65
TRAPPC11-208ENST00000511955 SYPP08247 313 aa4.72□□□□□ -1.65
TRAPPC11-208ENST00000511955 FTH1P19P0C7X4 201 aa4.72□□□□□ -1.65
TRAPPC11-208ENST00000511955 DRD4P21917 467 aa4.72□□□□□ -1.65
TRAPPC11-208ENST00000511955 LMO2P25791 158 aa4.72□□□□□ -1.65
TRAPPC11-208ENST00000511955 PSMB4P28070 264 aa4.72□□□□□ -1.65
TRAPPC11-208ENST00000511955 NPY2RP49146 381 aa4.72□□□□□ -1.65
TRAPPC11-208ENST00000511955 TXNL4AP83876 142 aaKnown RBP4.72□□□□□ -1.65
TRAPPC11-208ENST00000511955 MYL7Q01449 175 aa4.72□□□□□ -1.65
TRAPPC11-208ENST00000511955 MYL5Q02045 173 aa4.72□□□□□ -1.65
TRAPPC11-208ENST00000511955 ILF3Q12906 894 aaKnown RBP eCLIP4.72□□□□□ -1.65
TRAPPC11-208ENST00000511955 ALKBH1Q13686 389 aaKnown RBP4.72□□□□□ -1.65
TRAPPC11-208ENST00000511955 ELAVL3Q14576 367 aaKnown RBP4.72□□□□□ -1.65
TRAPPC11-208ENST00000511955 PTPRCAPQ14761 206 aa4.72□□□□□ -1.65
TRAPPC11-208ENST00000511955 SLC9A3R2Q15599 337 aa4.72□□□□□ -1.65
TRAPPC11-208ENST00000511955 SMN1Q16637 294 aaKnown RBP4.72□□□□□ -1.65
TRAPPC11-208ENST00000511955 PHKG1Q16816 387 aa4.72□□□□□ -1.65
TRAPPC11-208ENST00000511955 EXOC3L2Q2M3D2 409 aa4.72□□□□□ -1.65
TRAPPC11-208ENST00000511955 SOWAHAQ2M3V2 549 aa4.72□□□□□ -1.65
TRAPPC11-208ENST00000511955 VWC2Q2TAL6 325 aa4.72□□□□□ -1.65
TRAPPC11-208ENST00000511955 C18orf21Q32NC0 220 aaPredicted RBP4.72□□□□□ -1.65
TRAPPC11-208ENST00000511955 RUNDC3AQ59EK9 446 aa4.72□□□□□ -1.65
TRAPPC11-208ENST00000511955 XKR6Q5GH73 641 aa4.72□□□□□ -1.65
TRAPPC11-208ENST00000511955 ZNF569Q5MCW4 686 aa4.72□□□□□ -1.65
TRAPPC11-208ENST00000511955 LGSNQ5TDP6 509 aa4.72□□□□□ -1.65
TRAPPC11-208ENST00000511955 IRAK1BP1Q5VVH5 260 aa4.72□□□□□ -1.65
TRAPPC11-208ENST00000511955 DPPA4Q7L190 304 aa4.72□□□□□ -1.65
TRAPPC11-208ENST00000511955 UBE3DQ7Z6J8 389 aa4.72□□□□□ -1.65
TRAPPC11-208ENST00000511955 MMAAQ8IVH4 418 aaKnown RBP4.72□□□□□ -1.65
TRAPPC11-208ENST00000511955 IFT20Q8IY31 132 aa4.72□□□□□ -1.65
TRAPPC11-208ENST00000511955 LRRC56Q8IYG6 542 aaPredicted RBP4.72□□□□□ -1.65
TRAPPC11-208ENST00000511955 RBFAQ8N0V3 343 aa4.72□□□□□ -1.65
TRAPPC11-208ENST00000511955 PQLC1Q8N2U9 271 aa4.72□□□□□ -1.65
TRAPPC11-208ENST00000511955 RIBC1Q8N443 379 aaPredicted RBP4.72□□□□□ -1.65
TRAPPC11-208ENST00000511955 TTC9BQ8N6N2 239 aa4.72□□□□□ -1.65
TRAPPC11-208ENST00000511955 PQLC3Q8N755 202 aa4.72□□□□□ -1.65
TRAPPC11-208ENST00000511955 PTGR2Q8N8N7 351 aaPredicted RBP4.72□□□□□ -1.65
TRAPPC11-208ENST00000511955 TSPAN14Q8NG11 270 aa4.72□□□□□ -1.65
TRAPPC11-208ENST00000511955 ACTRT1Q8TDG2 376 aa4.72□□□□□ -1.65
TRAPPC11-208ENST00000511955 PYROXD1Q8WU10 500 aa4.72□□□□□ -1.65
TRAPPC11-208ENST00000511955 UBTD2Q8WUN7 234 aa4.72□□□□□ -1.65
TRAPPC11-208ENST00000511955 AP3S1Q92572 193 aa4.72□□□□□ -1.65
TRAPPC11-208ENST00000511955 SLC25A28Q96A46 364 aa4.72□□□□□ -1.65
TRAPPC11-208ENST00000511955 ARRDC3Q96B67 414 aa4.72□□□□□ -1.65
TRAPPC11-208ENST00000511955 ZNF775Q96BV0 537 aaPredicted RBP4.72□□□□□ -1.65
TRAPPC11-208ENST00000511955 HEXIM2Q96MH2 286 aaKnown RBP4.72□□□□□ -1.65
TRAPPC11-208ENST00000511955 KREMEN1Q96MU8 473 aa4.72□□□□□ -1.65
TRAPPC11-208ENST00000511955 ZIM3Q96PE6 472 aa4.72□□□□□ -1.65
TRAPPC11-208ENST00000511955 TSSK3Q96PN8 268 aa4.72□□□□□ -1.65
TRAPPC11-208ENST00000511955 KLHDC3Q9BQ90 382 aa4.72□□□□□ -1.65
TRAPPC11-208ENST00000511955 MRPL45Q9BRJ2 306 aaKnown RBP4.72□□□□□ -1.65
TRAPPC11-208ENST00000511955 COPS4Q9BT78 406 aa4.72□□□□□ -1.65
TRAPPC11-208ENST00000511955 WRAP53Q9BUR4 548 aaKnown RBP4.72□□□□□ -1.65
TRAPPC11-208ENST00000511955 GTPBP2Q9BX10 602 aaKnown RBP4.72□□□□□ -1.65
TRAPPC11-208ENST00000511955 ELOVL6Q9H5J4 265 aa4.72□□□□□ -1.65
TRAPPC11-208ENST00000511955 CPNE5Q9HCH3 593 aa4.72□□□□□ -1.65
TRAPPC11-208ENST00000511955 FAM207AQ9NSI2 230 aaPredicted RBP4.72□□□□□ -1.65
TRAPPC11-208ENST00000511955 PLEK2Q9NYT0 353 aa4.72□□□□□ -1.65
TRAPPC11-208ENST00000511955 TAS2R9Q9NYW1 312 aa4.72□□□□□ -1.65
TRAPPC11-208ENST00000511955 ERVW-1Q9UQF0 538 aa4.72□□□□□ -1.65
TRAPPC11-208ENST00000511955 CMAHPQ9Y471 501 aa4.72□□□□□ -1.65
TRAPPC11-208ENST00000511955 NPTNQ9Y639 398 aa4.72□□□□□ -1.65
TRAPPC11-208ENST00000511955 SCN1AP35498 2009 aa4.71□□□□□ -1.65
TRAPPC11-208ENST00000511955 ZNF729A6NN14 1252 aaPredicted RBP4.71□□□□□ -1.66
TRAPPC11-208ENST00000511955 STX7O15400 261 aaKnown RBP4.71□□□□□ -1.66
TRAPPC11-208ENST00000511955 NOL4O94818 638 aa4.71□□□□□ -1.66
TRAPPC11-208ENST00000511955 NKX2-2O95096 273 aa4.71□□□□□ -1.66
TRAPPC11-208ENST00000511955 GLUD1P00367 558 aa4.71□□□□□ -1.66
TRAPPC11-208ENST00000511955 AMY1AP04745 511 aa4.71□□□□□ -1.66
TRAPPC11-208ENST00000511955 GRPP07492 148 aa4.71□□□□□ -1.66
TRAPPC11-208ENST00000511955 CTSBP07858 339 aa4.71□□□□□ -1.66
TRAPPC11-208ENST00000511955 ERCC1P07992 297 aaPredicted RBP4.71□□□□□ -1.66
TRAPPC11-208ENST00000511955 OCMP0CE72 109 aaPredicted RBP4.71□□□□□ -1.66
TRAPPC11-208ENST00000511955 SLC2A1P11166 492 aa4.71□□□□□ -1.66
TRAPPC11-208ENST00000511955 NR2C1P13056 603 aa4.71□□□□□ -1.66
TRAPPC11-208ENST00000511955 ZNF44P15621 663 aa4.71□□□□□ -1.66
TRAPPC11-208ENST00000511955 ZNF8P17098 575 aaPredicted RBP4.71□□□□□ -1.66
TRAPPC11-208ENST00000511955 HLA-DMAP28067 261 aa4.71□□□□□ -1.66
TRAPPC11-208ENST00000511955 MAGEA2P43356 314 aa4.71□□□□□ -1.66
TRAPPC11-208ENST00000511955 FMO5P49326 533 aa4.71□□□□□ -1.66
TRAPPC11-208ENST00000511955 MMP15P51511 669 aa4.71□□□□□ -1.66
TRAPPC11-208ENST00000511955 KCNQ1P51787 676 aa4.71□□□□□ -1.66
TRAPPC11-208ENST00000511955 NAA20P61599 178 aa4.71□□□□□ -1.66
TRAPPC11-208ENST00000511955 PSPHP78330 225 aa4.71□□□□□ -1.66
TRAPPC11-208ENST00000511955 ADORA2A-AS1P86434 159 aa4.71□□□□□ -1.66
TRAPPC11-208ENST00000511955 SHC2P98077 582 aa4.71□□□□□ -1.66
TRAPPC11-208ENST00000511955 CDK16Q00536 496 aa4.71□□□□□ -1.66
TRAPPC11-208ENST00000511955 CHRNEQ04844 493 aa4.71□□□□□ -1.66
TRAPPC11-208ENST00000511955 ELAVL2Q12926 359 aaKnown RBP4.71□□□□□ -1.66
TRAPPC11-208ENST00000511955 SLC25A53Q5H9E4 307 aa4.71□□□□□ -1.66
TRAPPC11-208ENST00000511955 MANEALQ5VSG8 457 aa4.71□□□□□ -1.66
TRAPPC11-208ENST00000511955 SDHAF4Q5VUM1 108 aa4.71□□□□□ -1.66
TRAPPC11-208ENST00000511955 GJB7Q6PEY0 223 aa4.71□□□□□ -1.66
TRAPPC11-208ENST00000511955 C5orf46Q6UWT4 87 aa4.71□□□□□ -1.66
TRAPPC11-208ENST00000511955 Q6ZVL8 140 aa4.71□□□□□ -1.66
TRAPPC11-208ENST00000511955 TRIM46Q7Z4K8 759 aa4.71□□□□□ -1.66
TRAPPC11-208ENST00000511955 TRABD2AQ86V40 505 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 194.8 ms