RNA–Protein interactions for RNA: ENST00000511604.5

CPNE4-208, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 2,503 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-208ENST00000511604 TREX1Q9NSU2 369 aa6.92□□□□□ -1.3
CPNE4-208ENST00000511604 RLIMQ9NVW2 624 aa6.92□□□□□ -1.3
CPNE4-208ENST00000511604 CARHSP1Q9Y2V2 147 aaKnown RBP6.92□□□□□ -1.3
CPNE4-208ENST00000511604 YARS2Q9Y2Z4 477 aaKnown RBP6.92□□□□□ -1.3
CPNE4-208ENST00000511604 WDR90Q96KV7 1748 aa6.92□□□□□ -1.3
CPNE4-208ENST00000511604 HMSDA8MTL9 139 aa6.91□□□□□ -1.3
CPNE4-208ENST00000511604 PRR23D1E9PI22 279 aaPredicted RBP6.91□□□□□ -1.3
CPNE4-208ENST00000511604 M0QYT0 321 aa6.91□□□□□ -1.3
CPNE4-208ENST00000511604 EEF1E1O43324 174 aaKnown RBP6.91□□□□□ -1.3
CPNE4-208ENST00000511604 SLC19A2O60779 497 aa6.91□□□□□ -1.3
CPNE4-208ENST00000511604 GJB3O75712 270 aa6.91□□□□□ -1.3
CPNE4-208ENST00000511604 F2P00734 622 aa6.91□□□□□ -1.3
CPNE4-208ENST00000511604 F12P00748 615 aaPredicted RBP6.91□□□□□ -1.3
CPNE4-208ENST00000511604 SEMG1P04279 462 aa6.91□□□□□ -1.3
CPNE4-208ENST00000511604 HMBSP08397 361 aa6.91□□□□□ -1.3
CPNE4-208ENST00000511604 PRR23D2P0DMB1 279 aaPredicted RBP6.91□□□□□ -1.3
CPNE4-208ENST00000511604 ELK1P19419 428 aa6.91□□□□□ -1.3
CPNE4-208ENST00000511604 SLC6A4P31645 630 aa6.91□□□□□ -1.3
CPNE4-208ENST00000511604 AKT1P31749 480 aa6.91□□□□□ -1.3
CPNE4-208ENST00000511604 RGS19P49795 217 aa6.91□□□□□ -1.3
CPNE4-208ENST00000511604 GZMMP51124 257 aa6.91□□□□□ -1.3
CPNE4-208ENST00000511604 AKR1C2P52895 323 aa6.91□□□□□ -1.3
CPNE4-208ENST00000511604 CLDN8P56748 225 aa6.91□□□□□ -1.3
CPNE4-208ENST00000511604 RAP2BP61225 183 aa6.91□□□□□ -1.3
CPNE4-208ENST00000511604 BLOC1S1P78537 153 aa6.91□□□□□ -1.3
CPNE4-208ENST00000511604 AKR1C1Q04828 323 aa6.91□□□□□ -1.3
CPNE4-208ENST00000511604 FOXO1Q12778 655 aa6.91□□□□□ -1.3
CPNE4-208ENST00000511604 KIAA0040Q15053 153 aa6.91□□□□□ -1.3
CPNE4-208ENST00000511604 DHCR24Q15392 516 aa6.91□□□□□ -1.3
CPNE4-208ENST00000511604 SLC14A2Q15849 920 aa6.91□□□□□ -1.3
CPNE4-208ENST00000511604 SLC39A12Q504Y0 691 aa6.91□□□□□ -1.3
CPNE4-208ENST00000511604 C10orf91Q5T1B1 145 aa6.91□□□□□ -1.3
CPNE4-208ENST00000511604 ADGRF1Q5T601 910 aa6.91□□□□□ -1.3
CPNE4-208ENST00000511604 TPGS2Q68CL5 300 aa6.91□□□□□ -1.3
CPNE4-208ENST00000511604 MZT2AQ6P582 158 aa6.91□□□□□ -1.3
CPNE4-208ENST00000511604 PAQR6Q6TCH4 344 aa6.91□□□□□ -1.3
CPNE4-208ENST00000511604 MOB3CQ70IA8 216 aa6.91□□□□□ -1.3
CPNE4-208ENST00000511604 WDR53Q7Z5U6 358 aaPredicted RBP6.91□□□□□ -1.3
CPNE4-208ENST00000511604 VSIG10LQ86VR7 867 aa6.91□□□□□ -1.3
CPNE4-208ENST00000511604 ZSCAN1Q8NBB4 408 aa6.91□□□□□ -1.3
CPNE4-208ENST00000511604 SLC39A7Q92504 469 aa6.91□□□□□ -1.3
CPNE4-208ENST00000511604 C1GALT1C1Q96EU7 318 aa6.91□□□□□ -1.3
CPNE4-208ENST00000511604 LCORQ96JN0 433 aaPredicted RBP6.91□□□□□ -1.3
CPNE4-208ENST00000511604 ZNF599Q96NL3 588 aa6.91□□□□□ -1.3
CPNE4-208ENST00000511604 SLC2A13Q96QE2 648 aa6.91□□□□□ -1.3
CPNE4-208ENST00000511604 EPYCQ99645 322 aa6.91□□□□□ -1.3
CPNE4-208ENST00000511604 NT5C1AQ9BXI3 368 aa6.91□□□□□ -1.3
CPNE4-208ENST00000511604 CDT1Q9H211 546 aa6.91□□□□□ -1.3
CPNE4-208ENST00000511604 MTG2Q9H4K7 406 aa6.91□□□□□ -1.3
CPNE4-208ENST00000511604 CLN6Q9NWW5 311 aa6.91□□□□□ -1.3
CPNE4-208ENST00000511604 RASL12Q9NYN1 266 aa6.91□□□□□ -1.3
CPNE4-208ENST00000511604 MGAT4CQ9UBM8 478 aa6.91□□□□□ -1.3
CPNE4-208ENST00000511604 RPS6KB2Q9UBS0 482 aa6.91□□□□□ -1.3
CPNE4-208ENST00000511604 UBQLN1Q9UMX0 589 aaKnown RBP6.91□□□□□ -1.3
CPNE4-208ENST00000511604 MMACHCQ9Y4U1 282 aa6.91□□□□□ -1.3
CPNE4-208ENST00000511604 CLDN5O00501 218 aa6.91□□□□□ -1.3
CPNE4-208ENST00000511604 MID1O15344 667 aa6.91□□□□□ -1.3
CPNE4-208ENST00000511604 PSMD3O43242 534 aa6.91□□□□□ -1.3
CPNE4-208ENST00000511604 ARIH2O95376 493 aa6.91□□□□□ -1.3
CPNE4-208ENST00000511604 SBK2P0C263 348 aa6.91□□□□□ -1.3
CPNE4-208ENST00000511604 RNH1P13489 461 aaKnown RBP6.91□□□□□ -1.3
CPNE4-208ENST00000511604 TYRP14679 529 aa6.91□□□□□ -1.3
CPNE4-208ENST00000511604 HIST1H1BP16401 226 aaKnown RBP6.91□□□□□ -1.3
CPNE4-208ENST00000511604 CPEP16870 476 aa6.91□□□□□ -1.3
CPNE4-208ENST00000511604 LAG3P18627 525 aa6.91□□□□□ -1.3
CPNE4-208ENST00000511604 NFYBP25208 207 aa6.91□□□□□ -1.3
CPNE4-208ENST00000511604 CDC42P60953 191 aa6.91□□□□□ -1.3
CPNE4-208ENST00000511604 PRR5P85299 388 aa6.91□□□□□ -1.3
CPNE4-208ENST00000511604 IL10RBQ08334 325 aa6.91□□□□□ -1.3
CPNE4-208ENST00000511604 OR8G1Q15617 311 aa6.91□□□□□ -1.3
CPNE4-208ENST00000511604 USF2Q15853 346 aaPredicted RBP6.91□□□□□ -1.3
CPNE4-208ENST00000511604 ZNF239Q16600 458 aaKnown RBP6.91□□□□□ -1.3
CPNE4-208ENST00000511604 SLC36A2Q495M3 483 aa6.91□□□□□ -1.3
CPNE4-208ENST00000511604 CRTC2Q53ET0 693 aaPredicted RBP6.91□□□□□ -1.3
CPNE4-208ENST00000511604 HEPHL1Q6MZM0 1159 aa6.91□□□□□ -1.3
CPNE4-208ENST00000511604 C16orf54Q6UWD8 224 aa6.91□□□□□ -1.3
CPNE4-208ENST00000511604 ALKAL1Q6UXT8 129 aa6.91□□□□□ -1.3
CPNE4-208ENST00000511604 BAIAP2L2Q6UXY1 529 aa6.91□□□□□ -1.3
CPNE4-208ENST00000511604 Q6ZTK2 550 aa6.91□□□□□ -1.3
CPNE4-208ENST00000511604 CCDC117Q8IWD4 279 aaPredicted RBP6.91□□□□□ -1.3
CPNE4-208ENST00000511604 PRSS58Q8IYP2 241 aa6.91□□□□□ -1.3
CPNE4-208ENST00000511604 HDDC3Q8N4P3 179 aa6.91□□□□□ -1.3
CPNE4-208ENST00000511604 BOLLQ8N9W6 283 aaKnown RBP6.91□□□□□ -1.3
CPNE4-208ENST00000511604 PROKR2Q8NFJ6 384 aa6.91□□□□□ -1.3
CPNE4-208ENST00000511604 OR4Q3Q8NH05 313 aa6.91□□□□□ -1.3
CPNE4-208ENST00000511604 ZNF461Q8TAF7 563 aa6.91□□□□□ -1.3
CPNE4-208ENST00000511604 ACOT11Q8WXI4 607 aaPredicted RBP6.91□□□□□ -1.3
CPNE4-208ENST00000511604 SLC25A28Q96A46 364 aa6.91□□□□□ -1.3
CPNE4-208ENST00000511604 RAB3CQ96E17 227 aa6.91□□□□□ -1.3
CPNE4-208ENST00000511604 ZFP42Q96MM3 310 aa6.91□□□□□ -1.3
CPNE4-208ENST00000511604 ASB16Q96NS5 453 aa6.91□□□□□ -1.3
CPNE4-208ENST00000511604 OR4K3Q96R72 315 aa6.91□□□□□ -1.3
CPNE4-208ENST00000511604 UBL7Q96S82 380 aaPredicted RBP6.91□□□□□ -1.3
CPNE4-208ENST00000511604 CDCA3Q99618 268 aaPredicted RBP6.91□□□□□ -1.3
CPNE4-208ENST00000511604 TBL1YQ9BQ87 522 aa6.91□□□□□ -1.3
CPNE4-208ENST00000511604 TLNRD1Q9H1K6 362 aa6.91□□□□□ -1.3
CPNE4-208ENST00000511604 DEFB129Q9H1M3 183 aa6.91□□□□□ -1.3
CPNE4-208ENST00000511604 NXF3Q9H4D5 531 aaKnown RBP6.91□□□□□ -1.3
CPNE4-208ENST00000511604 UNKLQ9H9P5 680 aaKnown RBP6.91□□□□□ -1.3
CPNE4-208ENST00000511604 NPDC1Q9NQX5 325 aaPredicted RBP6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms