RNA–Protein interactions for RNA: ENST00000509912.5

NEK1-204, Transcript of NIMA related kinase 1, humanhuman

TSL 2

Gene NEK1, Length 2,971 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-204ENST00000509912 UTP15Q8TED0 518 aaKnown RBP4.62□□□□□ -1.67
NEK1-204ENST00000509912 TMEM68Q96MH6 324 aa4.62□□□□□ -1.67
NEK1-204ENST00000509912 DACH2Q96NX9 599 aa4.62□□□□□ -1.67
NEK1-204ENST00000509912 HAUS4Q9H6D7 363 aa4.62□□□□□ -1.67
NEK1-204ENST00000509912 SLC40A1Q9NP59 571 aa4.62□□□□□ -1.67
NEK1-204ENST00000509912 MBNL1Q9NR56 388 aaKnown RBP4.62□□□□□ -1.67
NEK1-204ENST00000509912 MYO18BQ8IUG5 2567 aa4.62□□□□□ -1.67
NEK1-204ENST00000509912 CTAGE9A4FU28 777 aa4.61□□□□□ -1.67
NEK1-204ENST00000509912 VSTM2BA6NLU5 285 aa4.61□□□□□ -1.67
NEK1-204ENST00000509912 HSPB6O14558 160 aa4.61□□□□□ -1.67
NEK1-204ENST00000509912 INPP4BO15327 924 aa4.61□□□□□ -1.67
NEK1-204ENST00000509912 HCRTR2O43614 444 aa4.61□□□□□ -1.67
NEK1-204ENST00000509912 RAD1O60671 282 aa4.61□□□□□ -1.67
NEK1-204ENST00000509912 SRPX2O60687 465 aaPredicted RBP4.61□□□□□ -1.67
NEK1-204ENST00000509912 GBAP04062 536 aa4.61□□□□□ -1.67
NEK1-204ENST00000509912 SPAM1P38567 509 aa4.61□□□□□ -1.67
NEK1-204ENST00000509912 NPY2RP49146 381 aa4.61□□□□□ -1.67
NEK1-204ENST00000509912 SELENOPP49908 381 aa4.61□□□□□ -1.67
NEK1-204ENST00000509912 GPR143P51810 404 aa4.61□□□□□ -1.67
NEK1-204ENST00000509912 TUBB4BP68371 445 aa4.61□□□□□ -1.67
NEK1-204ENST00000509912 ABATP80404 500 aa4.61□□□□□ -1.67
NEK1-204ENST00000509912 IL1RL1Q01638 556 aa4.61□□□□□ -1.67
NEK1-204ENST00000509912 PLP2Q04941 152 aa4.61□□□□□ -1.67
NEK1-204ENST00000509912 SRSF1Q07955 248 aaKnown RBP eCLIP4.61□□□□□ -1.67
NEK1-204ENST00000509912 CDC20Q12834 499 aa4.61□□□□□ -1.67
NEK1-204ENST00000509912 TUBA3CQ13748 450 aa4.61□□□□□ -1.67
NEK1-204ENST00000509912 TUBB2AQ13885 445 aa4.61□□□□□ -1.67
NEK1-204ENST00000509912 ZNF235Q14590 738 aa4.61□□□□□ -1.67
NEK1-204ENST00000509912 SPA17Q15506 151 aa4.61□□□□□ -1.67
NEK1-204ENST00000509912 FAM153CQ494X1 144 aa4.61□□□□□ -1.67
NEK1-204ENST00000509912 COLEC12Q5KU26 742 aa4.61□□□□□ -1.67
NEK1-204ENST00000509912 TUBA3EQ6PEY2 450 aa4.61□□□□□ -1.67
NEK1-204ENST00000509912 ENPP7Q6UWV6 458 aa4.61□□□□□ -1.67
NEK1-204ENST00000509912 PQLC2Q6ZP29 291 aa4.61□□□□□ -1.67
NEK1-204ENST00000509912 NT5DC3Q86UY8 548 aa4.61□□□□□ -1.67
NEK1-204ENST00000509912 FAM131BQ86XD5 332 aa4.61□□□□□ -1.67
NEK1-204ENST00000509912 TBC1D21Q8IYX1 336 aa4.61□□□□□ -1.67
NEK1-204ENST00000509912 OR6K2Q8NGY2 324 aa4.61□□□□□ -1.67
NEK1-204ENST00000509912 SLC20A1Q8WUM9 679 aa4.61□□□□□ -1.67
NEK1-204ENST00000509912 PGAM5Q96HS1 289 aa4.61□□□□□ -1.67
NEK1-204ENST00000509912 TUBB2BQ9BVA1 445 aa4.61□□□□□ -1.67
NEK1-204ENST00000509912 FUT8Q9BYC5 575 aa4.61□□□□□ -1.67
NEK1-204ENST00000509912 TMEM184CQ9NVA4 438 aa4.61□□□□□ -1.67
NEK1-204ENST00000509912 OR6C2Q9NZP2 312 aa4.61□□□□□ -1.67
NEK1-204ENST00000509912 CNIH4Q9P003 139 aa4.61□□□□□ -1.67
NEK1-204ENST00000509912 GOLGA6L10A6NI86 522 aa4.61□□□□□ -1.67
NEK1-204ENST00000509912 MAGEB17A8MXT2 336 aa4.61□□□□□ -1.67
NEK1-204ENST00000509912 GP1BBP13224 206 aa4.61□□□□□ -1.67
NEK1-204ENST00000509912 TMEM11P17152 192 aa4.61□□□□□ -1.67
NEK1-204ENST00000509912 TPSB2P20231 275 aa4.61□□□□□ -1.67
NEK1-204ENST00000509912 IDSP22304 550 aa4.61□□□□□ -1.67
NEK1-204ENST00000509912 PTPN3P26045 913 aa4.61□□□□□ -1.67
NEK1-204ENST00000509912 CD81P60033 236 aa4.61□□□□□ -1.67
NEK1-204ENST00000509912 ROR2Q01974 943 aaKnown RBP4.61□□□□□ -1.67
NEK1-204ENST00000509912 ACSM1Q08AH1 577 aa4.61□□□□□ -1.67
NEK1-204ENST00000509912 ZBTB17Q13105 803 aa4.61□□□□□ -1.67
NEK1-204ENST00000509912 CBX3Q13185 183 aa4.61□□□□□ -1.67
NEK1-204ENST00000509912 TPSAB1Q15661 275 aa4.61□□□□□ -1.67
NEK1-204ENST00000509912 SMN1Q16637 294 aaKnown RBP4.61□□□□□ -1.67
NEK1-204ENST00000509912 WLSQ5T9L3 541 aa4.61□□□□□ -1.67
NEK1-204ENST00000509912 RWDD4Q6NW29 188 aaKnown RBP4.61□□□□□ -1.67
NEK1-204ENST00000509912 PRMT9Q6P2P2 845 aa4.61□□□□□ -1.67
NEK1-204ENST00000509912 Q6ZPB1 254 aaPredicted RBP4.61□□□□□ -1.67
NEK1-204ENST00000509912 CCDC121Q6ZUS5 278 aa4.61□□□□□ -1.67
NEK1-204ENST00000509912 SNX20Q7Z614 316 aa4.61□□□□□ -1.67
NEK1-204ENST00000509912 CCDC190Q86UF4 302 aa4.61□□□□□ -1.67
NEK1-204ENST00000509912 VASH2Q86V25 355 aa4.61□□□□□ -1.67
NEK1-204ENST00000509912 ZFAND4Q86XD8 727 aa4.61□□□□□ -1.67
NEK1-204ENST00000509912 NAGSQ8N159 534 aa4.61□□□□□ -1.67
NEK1-204ENST00000509912 APOBEC4Q8WW27 367 aaKnown RBP4.61□□□□□ -1.67
NEK1-204ENST00000509912 TSACCQ96A04 125 aaPredicted RBP4.61□□□□□ -1.67
NEK1-204ENST00000509912 KIAA1143Q96AT1 154 aaPredicted RBP4.61□□□□□ -1.67
NEK1-204ENST00000509912 RNF183Q96D59 192 aa4.61□□□□□ -1.67
NEK1-204ENST00000509912 C20orf173Q96LM9 149 aa4.61□□□□□ -1.67
NEK1-204ENST00000509912 NAPGQ99747 312 aaPredicted RBP4.61□□□□□ -1.67
NEK1-204ENST00000509912 WRAP53Q9BUR4 548 aaKnown RBP4.61□□□□□ -1.67
NEK1-204ENST00000509912 ESRP2Q9H6T0 727 aaKnown RBP4.61□□□□□ -1.67
NEK1-204ENST00000509912 POMT2Q9UKY4 750 aa4.61□□□□□ -1.67
NEK1-204ENST00000509912 NBEAQ8NFP9 2946 aa4.6□□□□□ -1.67
NEK1-204ENST00000509912 ASH1LQ9NR48 2969 aaKnown RBP4.6□□□□□ -1.67
NEK1-204ENST00000509912 KRT86O43790 486 aa4.6□□□□□ -1.67
NEK1-204ENST00000509912 GPC4O75487 556 aa4.6□□□□□ -1.67
NEK1-204ENST00000509912 BCAS2O75934 225 aaPredicted RBP4.6□□□□□ -1.67
NEK1-204ENST00000509912 ATP1A1P05023 1023 aaKnown RBP4.6□□□□□ -1.67
NEK1-204ENST00000509912 PCCBP05166 539 aa4.6□□□□□ -1.67
NEK1-204ENST00000509912 GSTA2P09210 222 aa4.6□□□□□ -1.67
NEK1-204ENST00000509912 CDH2P19022 906 aaPredicted RBP4.6□□□□□ -1.67
NEK1-204ENST00000509912 DCTDP32321 178 aa4.6□□□□□ -1.67
NEK1-204ENST00000509912 ETV5P41161 510 aa4.6□□□□□ -1.67
NEK1-204ENST00000509912 BMXP51813 675 aa4.6□□□□□ -1.67
NEK1-204ENST00000509912 ZNF140P52738 457 aaPredicted RBP4.6□□□□□ -1.67
NEK1-204ENST00000509912 XIAPP98170 497 aa4.6□□□□□ -1.67
NEK1-204ENST00000509912 CDKL1Q00532 357 aa4.6□□□□□ -1.67
NEK1-204ENST00000509912 KIF5AQ12840 1032 aa4.6□□□□□ -1.67
NEK1-204ENST00000509912 SRSF6Q13247 344 aaKnown RBP4.6□□□□□ -1.67
NEK1-204ENST00000509912 TGIF1Q15583 401 aa4.6□□□□□ -1.67
NEK1-204ENST00000509912 TFDP3Q5H9I0 405 aa4.6□□□□□ -1.67
NEK1-204ENST00000509912 TCTE1Q5JU00 501 aa4.6□□□□□ -1.67
NEK1-204ENST00000509912 TAF8Q7Z7C8 310 aa4.6□□□□□ -1.67
NEK1-204ENST00000509912 DSELQ8IZU8 1212 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms