RNA–Protein interactions for RNA: ENST00000509828.1

MBD4-208, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 2

Gene MBD4, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-208ENST00000509828 MAP4K2Q12851 820 aa9.34□□□□□ -0.91
MBD4-208ENST00000509828 E2F2Q14209 437 aa9.34□□□□□ -0.91
MBD4-208ENST00000509828 PFKFB4Q16877 469 aa9.34□□□□□ -0.91
MBD4-208ENST00000509828 SGO1Q5FBB7 561 aa9.34□□□□□ -0.91
MBD4-208ENST00000509828 SH2D5Q6ZV89 423 aa9.34□□□□□ -0.91
MBD4-208ENST00000509828 LARP4Q71RC2 724 aaKnown RBP eCLIP9.34□□□□□ -0.91
MBD4-208ENST00000509828 ZNF611Q8N823 705 aa9.34□□□□□ -0.91
MBD4-208ENST00000509828 GBP7Q8N8V2 638 aaPredicted RBP9.34□□□□□ -0.91
MBD4-208ENST00000509828 UBTD2Q8WUN7 234 aa9.34□□□□□ -0.91
MBD4-208ENST00000509828 GFM2Q969S9 779 aaKnown RBP9.34□□□□□ -0.91
MBD4-208ENST00000509828 KLHL29Q96CT2 875 aa9.34□□□□□ -0.91
MBD4-208ENST00000509828 ZBED6CLQ96FA7 236 aaPredicted RBP9.34□□□□□ -0.91
MBD4-208ENST00000509828 PLPPR2Q96GM1 343 aa9.34□□□□□ -0.91
MBD4-208ENST00000509828 GPR22Q99680 433 aa9.34□□□□□ -0.91
MBD4-208ENST00000509828 RBBP8Q99708 897 aa9.34□□□□□ -0.91
MBD4-208ENST00000509828 TACO1Q9BSH4 297 aaKnown RBP9.34□□□□□ -0.91
MBD4-208ENST00000509828 IPPKQ9H8X2 491 aa9.34□□□□□ -0.91
MBD4-208ENST00000509828 SMYD2Q9NRG4 433 aa9.34□□□□□ -0.91
MBD4-208ENST00000509828 SDHAF3Q9NRP4 125 aa9.34□□□□□ -0.91
MBD4-208ENST00000509828 ZNF701Q9NV72 531 aaPredicted RBP9.34□□□□□ -0.91
MBD4-208ENST00000509828 STOML1Q9UBI4 398 aa9.34□□□□□ -0.91
MBD4-208ENST00000509828 HEY2Q9UBP5 337 aa9.34□□□□□ -0.91
MBD4-208ENST00000509828 PLLPQ9Y342 182 aa9.34□□□□□ -0.91
MBD4-208ENST00000509828 EMC9Q9Y3B6 208 aa9.34□□□□□ -0.91
MBD4-208ENST00000509828 RNF11Q9Y3C5 154 aa9.34□□□□□ -0.91
MBD4-208ENST00000509828 MRPS18CQ9Y3D5 142 aaKnown RBP9.34□□□□□ -0.91
MBD4-208ENST00000509828 TSC22D4Q9Y3Q8 395 aa9.34□□□□□ -0.91
MBD4-208ENST00000509828 OR10H1Q9Y4A9 318 aa9.34□□□□□ -0.91
MBD4-208ENST00000509828 VPS13CQ709C8 3753 aa9.33□□□□□ -0.92
MBD4-208ENST00000509828 A0A087X1B8 175 aa9.33□□□□□ -0.92
MBD4-208ENST00000509828 C1orf226A1L170 272 aa9.33□□□□□ -0.92
MBD4-208ENST00000509828 FRG2CA6NGY1 282 aa9.33□□□□□ -0.92
MBD4-208ENST00000509828 LRRC14BA6NHZ5 514 aa9.33□□□□□ -0.92
MBD4-208ENST00000509828 OR6C70A6NIJ9 312 aa9.33□□□□□ -0.92
MBD4-208ENST00000509828 CXorf49A8MYA2 514 aaPredicted RBP9.33□□□□□ -0.92
MBD4-208ENST00000509828 H3BML4 177 aa9.33□□□□□ -0.92
MBD4-208ENST00000509828 FOXE1O00358 373 aaPredicted RBP9.33□□□□□ -0.92
MBD4-208ENST00000509828 CLOCKO15516 846 aa9.33□□□□□ -0.92
MBD4-208ENST00000509828 SCO2O43819 266 aa9.33□□□□□ -0.92
MBD4-208ENST00000509828 ZIC3O60481 467 aa9.33□□□□□ -0.92
MBD4-208ENST00000509828 UGDHO60701 494 aa9.33□□□□□ -0.92
MBD4-208ENST00000509828 TNFRSF21O75509 655 aa9.33□□□□□ -0.92
MBD4-208ENST00000509828 BCAS2O75934 225 aaPredicted RBP9.33□□□□□ -0.92
MBD4-208ENST00000509828 CLDN9O95484 217 aa9.33□□□□□ -0.92
MBD4-208ENST00000509828 PLAUP00749 431 aa9.33□□□□□ -0.92
MBD4-208ENST00000509828 FESP07332 822 aa9.33□□□□□ -0.92
MBD4-208ENST00000509828 FCGR2AP12318 317 aa9.33□□□□□ -0.92
MBD4-208ENST00000509828 PAX1P15863 534 aa9.33□□□□□ -0.92
MBD4-208ENST00000509828 S1PR1P21453 382 aa9.33□□□□□ -0.92
MBD4-208ENST00000509828 IVDP26440 423 aa9.33□□□□□ -0.92
MBD4-208ENST00000509828 CRABP2P29373 138 aa9.33□□□□□ -0.92
MBD4-208ENST00000509828 SSTR1P30872 391 aa9.33□□□□□ -0.92
MBD4-208ENST00000509828 CLK3P49761 638 aaKnown RBP9.33□□□□□ -0.92
MBD4-208ENST00000509828 DSCR4P56555 118 aaPredicted RBP9.33□□□□□ -0.92
MBD4-208ENST00000509828 IFT88Q13099 833 aa9.33□□□□□ -0.92
MBD4-208ENST00000509828 GTF2H2Q13888 395 aa9.33□□□□□ -0.92
MBD4-208ENST00000509828 FASTKD3Q14CZ7 662 aaKnown RBP9.33□□□□□ -0.92
MBD4-208ENST00000509828 PON3Q15166 354 aa9.33□□□□□ -0.92
MBD4-208ENST00000509828 ETFDHQ16134 617 aa9.33□□□□□ -0.92
MBD4-208ENST00000509828 ERCC6LQ2NKX8 1250 aa9.33□□□□□ -0.92
MBD4-208ENST00000509828 TRMT12Q53H54 448 aaKnown RBP9.33□□□□□ -0.92
MBD4-208ENST00000509828 GTF2H2CQ6P1K8 395 aa9.33□□□□□ -0.92
MBD4-208ENST00000509828 ISCA2Q86U28 154 aa9.33□□□□□ -0.92
MBD4-208ENST00000509828 STK32CQ86UX6 486 aa9.33□□□□□ -0.92
MBD4-208ENST00000509828 HIPK1Q86Z02 1210 aa9.33□□□□□ -0.92
MBD4-208ENST00000509828 FNDC9Q8TBE3 224 aa9.33□□□□□ -0.92
MBD4-208ENST00000509828 AKAP1Q92667 903 aaKnown RBP eCLIP9.33□□□□□ -0.92
MBD4-208ENST00000509828 UBXN10Q96LJ8 280 aa9.33□□□□□ -0.92
MBD4-208ENST00000509828 DOCK7Q96N67 2140 aa9.33□□□□□ -0.92
MBD4-208ENST00000509828 FAIM2Q9BWQ8 316 aa9.33□□□□□ -0.92
MBD4-208ENST00000509828 ZNF717Q9BY31 904 aaPredicted RBP9.33□□□□□ -0.92
MBD4-208ENST00000509828 DSN1Q9H410 356 aa9.33□□□□□ -0.92
MBD4-208ENST00000509828 PTGES2Q9H7Z7 377 aa9.33□□□□□ -0.92
MBD4-208ENST00000509828 PSD3Q9NYI0 1048 aa9.33□□□□□ -0.92
MBD4-208ENST00000509828 MAT2BQ9NZL9 334 aa9.33□□□□□ -0.92
MBD4-208ENST00000509828 CPSF2Q9P2I0 782 aaKnown RBP9.33□□□□□ -0.92
MBD4-208ENST00000509828 ACOT9Q9Y305 439 aa9.33□□□□□ -0.92
MBD4-208ENST00000509828 ZNF175Q9Y473 711 aa9.33□□□□□ -0.92
MBD4-208ENST00000509828 TNPO3Q9Y5L0 923 aaKnown RBP9.33□□□□□ -0.92
MBD4-208ENST00000509828 A8MV72 311 aaPredicted RBP9.32□□□□□ -0.92
MBD4-208ENST00000509828 LINC01387J3KSC0 135 aa9.32□□□□□ -0.92
MBD4-208ENST00000509828 PHF1O43189 567 aaPredicted RBP9.32□□□□□ -0.92
MBD4-208ENST00000509828 KLF4O43474 513 aa9.32□□□□□ -0.92
MBD4-208ENST00000509828 CD5LO43866 347 aa9.32□□□□□ -0.92
MBD4-208ENST00000509828 SEMA3DO95025 777 aa9.32□□□□□ -0.92
MBD4-208ENST00000509828 WISP3O95389 354 aaPredicted RBP9.32□□□□□ -0.92
MBD4-208ENST00000509828 ATP1B1P05026 303 aa9.32□□□□□ -0.92
MBD4-208ENST00000509828 CCKARP32238 428 aa9.32□□□□□ -0.92
MBD4-208ENST00000509828 CCNG1P51959 295 aa9.32□□□□□ -0.92
MBD4-208ENST00000509828 CLDN15P56746 228 aa9.32□□□□□ -0.92
MBD4-208ENST00000509828 GPX6P59796 221 aa9.32□□□□□ -0.92
MBD4-208ENST00000509828 STX5Q13190 355 aa9.32□□□□□ -0.92
MBD4-208ENST00000509828 CAPRIN1Q14444 709 aaKnown RBP9.32□□□□□ -0.92
MBD4-208ENST00000509828 FAM83EQ2M2I3 478 aa9.32□□□□□ -0.92
MBD4-208ENST00000509828 PRICKLE4Q2TBC4 344 aa9.32□□□□□ -0.92
MBD4-208ENST00000509828 GRTP1Q5TC63 336 aa9.32□□□□□ -0.92
MBD4-208ENST00000509828 SLC48A1Q6P1K1 146 aa9.32□□□□□ -0.92
MBD4-208ENST00000509828 KLC3Q6P597 504 aa9.32□□□□□ -0.92
MBD4-208ENST00000509828 FAM214BQ7L5A3 538 aa9.32□□□□□ -0.92
MBD4-208ENST00000509828 GOLGA7Q7Z5G4 137 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms