RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 C21orf33P30042 268 aaPredicted RBP4.23□□□□□ -1.73
NIPBL-206ENST00000509429 THBS4P35443 961 aa4.23□□□□□ -1.73
NIPBL-206ENST00000509429 MAP3K8P41279 467 aa4.23□□□□□ -1.73
NIPBL-206ENST00000509429 VIPR2P41587 438 aa4.23□□□□□ -1.73
NIPBL-206ENST00000509429 NSFP46459 744 aaKnown RBP4.23□□□□□ -1.73
NIPBL-206ENST00000509429 SRP9P49458 86 aaKnown RBP4.23□□□□□ -1.73
NIPBL-206ENST00000509429 STK19P49842 368 aaPredicted RBP4.23□□□□□ -1.73
NIPBL-206ENST00000509429 PNLIPRP2P54317 469 aa4.23□□□□□ -1.73
NIPBL-206ENST00000509429 ARSFP54793 590 aa4.23□□□□□ -1.73
NIPBL-206ENST00000509429 CDH13P55290 713 aa4.23□□□□□ -1.73
NIPBL-206ENST00000509429 WNT3P56703 355 aa4.23□□□□□ -1.73
NIPBL-206ENST00000509429 SLC37A1P57057 533 aa4.23□□□□□ -1.73
NIPBL-206ENST00000509429 SSBP2P81877 361 aaPredicted RBP4.23□□□□□ -1.73
NIPBL-206ENST00000509429 MYL7Q01449 175 aa4.23□□□□□ -1.73
NIPBL-206ENST00000509429 SP3Q02447 781 aa4.23□□□□□ -1.73
NIPBL-206ENST00000509429 GABPAQ06546 454 aa4.23□□□□□ -1.73
NIPBL-206ENST00000509429 MZT1Q08AG7 82 aa4.23□□□□□ -1.73
NIPBL-206ENST00000509429 IL18R1Q13478 541 aa4.23□□□□□ -1.73
NIPBL-206ENST00000509429 IL10RAQ13651 578 aa4.23□□□□□ -1.73
NIPBL-206ENST00000509429 SERTAD2Q14140 314 aa4.23□□□□□ -1.73
NIPBL-206ENST00000509429 HNF4GQ14541 408 aa4.23□□□□□ -1.73
NIPBL-206ENST00000509429 KPNB1Q14974 876 aaKnown RBP4.23□□□□□ -1.73
NIPBL-206ENST00000509429 ARL6IP1Q15041 203 aa4.23□□□□□ -1.73
NIPBL-206ENST00000509429 SLC9A3R2Q15599 337 aa4.23□□□□□ -1.73
NIPBL-206ENST00000509429 ZBTB6Q15916 424 aa4.23□□□□□ -1.73
NIPBL-206ENST00000509429 C5orf47Q569G3 176 aa4.23□□□□□ -1.73
NIPBL-206ENST00000509429 XKR7Q5GH72 579 aa4.23□□□□□ -1.73
NIPBL-206ENST00000509429 ARMCX4Q5H9R4 360 aa4.23□□□□□ -1.73
NIPBL-206ENST00000509429 ESRP1Q6NXG1 681 aaKnown RBP4.23□□□□□ -1.73
NIPBL-206ENST00000509429 DHRS4L2Q6PKH6 230 aa4.23□□□□□ -1.73
NIPBL-206ENST00000509429 SPESP1Q6UW49 350 aa4.23□□□□□ -1.73
NIPBL-206ENST00000509429 CYHR1Q6ZMK1 362 aa4.23□□□□□ -1.73
NIPBL-206ENST00000509429 DCDC5Q6ZRR9 648 aa4.23□□□□□ -1.73
NIPBL-206ENST00000509429 ARCQ7LC44 396 aa4.23□□□□□ -1.73
NIPBL-206ENST00000509429 AACSQ86V21 672 aa4.23□□□□□ -1.73
NIPBL-206ENST00000509429 FOXP4Q8IVH2 680 aaPredicted RBP4.23□□□□□ -1.73
NIPBL-206ENST00000509429 SIAH3Q8IW03 269 aa4.23□□□□□ -1.73
NIPBL-206ENST00000509429 RNF113BQ8IZP6 322 aaKnown RBP4.23□□□□□ -1.73
NIPBL-206ENST00000509429 SPATA6LQ8N4H0 392 aa4.23□□□□□ -1.73
NIPBL-206ENST00000509429 PQLC3Q8N755 202 aa4.23□□□□□ -1.73
NIPBL-206ENST00000509429 RNF148Q8N7C7 305 aa4.23□□□□□ -1.73
NIPBL-206ENST00000509429 CCDC71LQ8N9Z2 235 aa4.23□□□□□ -1.73
NIPBL-206ENST00000509429 MFSD9Q8NBP5 474 aa4.23□□□□□ -1.73
NIPBL-206ENST00000509429 CLEC1AQ8NC01 280 aa4.23□□□□□ -1.73
NIPBL-206ENST00000509429 OR5T2Q8NGG2 359 aa4.23□□□□□ -1.73
NIPBL-206ENST00000509429 KCNG3Q8TAE7 436 aa4.23□□□□□ -1.73
NIPBL-206ENST00000509429 SPPL2AQ8TCT8 520 aa4.23□□□□□ -1.73
NIPBL-206ENST00000509429 CXorf40AQ8TE69 158 aa4.23□□□□□ -1.73
NIPBL-206ENST00000509429 CA5BP1Q8WTZ4 195 aa4.23□□□□□ -1.73
NIPBL-206ENST00000509429 CHPT1Q8WUD6 406 aa4.23□□□□□ -1.73
NIPBL-206ENST00000509429 NRG4Q8WWG1 115 aa4.23□□□□□ -1.73
NIPBL-206ENST00000509429 DLG3Q92796 817 aa4.23□□□□□ -1.73
NIPBL-206ENST00000509429 UFD1Q92890 307 aa4.23□□□□□ -1.73
NIPBL-206ENST00000509429 EAF2Q96CJ1 260 aaPredicted RBP4.23□□□□□ -1.73
NIPBL-206ENST00000509429 RRNAD1Q96FB5 475 aaKnown RBP4.23□□□□□ -1.73
NIPBL-206ENST00000509429 CPB2Q96IY4 423 aa4.23□□□□□ -1.73
NIPBL-206ENST00000509429 LRR1Q96L50 414 aa4.23□□□□□ -1.73
NIPBL-206ENST00000509429 SENP8Q96LD8 212 aa4.23□□□□□ -1.73
NIPBL-206ENST00000509429 C3orf30Q96M34 536 aa4.23□□□□□ -1.73
NIPBL-206ENST00000509429 FOPNLQ96NB1 174 aa4.23□□□□□ -1.73
NIPBL-206ENST00000509429 PRAP1Q96NZ9 151 aa4.23□□□□□ -1.73
NIPBL-206ENST00000509429 OR5B2Q96R09 309 aa4.23□□□□□ -1.73
NIPBL-206ENST00000509429 SLC22A12Q96S37 553 aa4.23□□□□□ -1.73
NIPBL-206ENST00000509429 NPAS2Q99743 824 aa4.23□□□□□ -1.73
NIPBL-206ENST00000509429 SRSF8Q9BRL6 282 aaKnown RBP4.23□□□□□ -1.73
NIPBL-206ENST00000509429 CHRDL1Q9BU40 450 aa4.23□□□□□ -1.73
NIPBL-206ENST00000509429 FNDC11Q9BVV2 318 aa4.23□□□□□ -1.73
NIPBL-206ENST00000509429 BOCQ9BWV1 1114 aa4.23□□□□□ -1.73
NIPBL-206ENST00000509429 YTHDF1Q9BYJ9 559 aaKnown RBP4.23□□□□□ -1.73
NIPBL-206ENST00000509429 CSTL1Q9H114 145 aa4.23□□□□□ -1.73
NIPBL-206ENST00000509429 DDX31Q9H8H2 851 aaKnown RBP4.23□□□□□ -1.73
NIPBL-206ENST00000509429 ACTR8Q9H981 624 aa4.23□□□□□ -1.73
NIPBL-206ENST00000509429 ANKRA2Q9H9E1 313 aa4.23□□□□□ -1.73
NIPBL-206ENST00000509429 GPN2Q9H9Y4 310 aaPredicted RBP4.23□□□□□ -1.73
NIPBL-206ENST00000509429 ROPN1Q9HAT0 212 aaPredicted RBP4.23□□□□□ -1.73
NIPBL-206ENST00000509429 PLEKHA2Q9HB19 425 aa4.23□□□□□ -1.73
NIPBL-206ENST00000509429 NANSQ9NR45 359 aa4.23□□□□□ -1.73
NIPBL-206ENST00000509429 YAE1D1Q9NRH1 226 aa4.23□□□□□ -1.73
NIPBL-206ENST00000509429 OLFML3Q9NRN5 406 aa4.23□□□□□ -1.73
NIPBL-206ENST00000509429 BEX4Q9NWD9 120 aaPredicted RBP4.23□□□□□ -1.73
NIPBL-206ENST00000509429 OR6C3Q9NZP0 311 aa4.23□□□□□ -1.73
NIPBL-206ENST00000509429 ARPP21Q9UBL0 812 aaPredicted RBP4.23□□□□□ -1.73
NIPBL-206ENST00000509429 SEC14L3Q9UDX4 400 aa4.23□□□□□ -1.73
NIPBL-206ENST00000509429 MLXQ9UH92 298 aa4.23□□□□□ -1.73
NIPBL-206ENST00000509429 UBQLN2Q9UHD9 624 aa4.23□□□□□ -1.73
NIPBL-206ENST00000509429 SMPXQ9UHP9 88 aa4.23□□□□□ -1.73
NIPBL-206ENST00000509429 GLS2Q9UI32 602 aa4.23□□□□□ -1.73
NIPBL-206ENST00000509429 CDH22Q9UJ99 828 aa4.23□□□□□ -1.73
NIPBL-206ENST00000509429 PYCARDQ9ULZ3 195 aa4.23□□□□□ -1.73
NIPBL-206ENST00000509429 COPS3Q9UNS2 423 aa4.23□□□□□ -1.73
NIPBL-206ENST00000509429 PPP1R3CQ9UQK1 317 aa4.23□□□□□ -1.73
NIPBL-206ENST00000509429 GOLT1BQ9Y3E0 138 aa4.23□□□□□ -1.73
NIPBL-206ENST00000509429 NEU2Q9Y3R4 380 aa4.23□□□□□ -1.73
NIPBL-206ENST00000509429 KLK4Q9Y5K2 254 aa4.23□□□□□ -1.73
NIPBL-206ENST00000509429 NRXN3Q9Y4C0 1643 aa4.23□□□□□ -1.73
NIPBL-206ENST00000509429 RTL1A6NKG5 1358 aa4.23□□□□□ -1.73
NIPBL-206ENST00000509429 AK9Q5TCS8 1911 aa4.23□□□□□ -1.73
NIPBL-206ENST00000509429 SF3B1O75533 1304 aaKnown RBP eCLIP4.22□□□□□ -1.73
NIPBL-206ENST00000509429 CACNA1FO60840 1977 aa4.22□□□□□ -1.73
NIPBL-206ENST00000509429 XRN1Q8IZH2 1706 aaKnown RBP4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms