RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 ACP2P11117 423 aa6.62□□□□□ -1.35
TOPBP1-207ENST00000509162 LAMP1P11279 417 aa6.62□□□□□ -1.35
TOPBP1-207ENST00000509162 DRD2P14416 443 aa6.62□□□□□ -1.35
TOPBP1-207ENST00000509162 TNNI3P19429 210 aa6.62□□□□□ -1.35
TOPBP1-207ENST00000509162 CSNK2A2P19784 350 aaPredicted RBP6.62□□□□□ -1.35
TOPBP1-207ENST00000509162 PIK3R1P27986 724 aa6.62□□□□□ -1.35
TOPBP1-207ENST00000509162 PIGAP37287 484 aa6.62□□□□□ -1.35
TOPBP1-207ENST00000509162 DNASE1L1P49184 302 aa6.62□□□□□ -1.35
TOPBP1-207ENST00000509162 MEOX1P50221 254 aa6.62□□□□□ -1.35
TOPBP1-207ENST00000509162 SSR4P51571 173 aa6.62□□□□□ -1.35
TOPBP1-207ENST00000509162 OC90Q02509 493 aaPredicted RBP6.62□□□□□ -1.35
TOPBP1-207ENST00000509162 C2orf80Q0P641 193 aa6.62□□□□□ -1.35
TOPBP1-207ENST00000509162 STX3Q13277 289 aa6.62□□□□□ -1.35
TOPBP1-207ENST00000509162 INAQ16352 499 aa6.62□□□□□ -1.35
TOPBP1-207ENST00000509162 CMPK2Q5EBM0 449 aa6.62□□□□□ -1.35
TOPBP1-207ENST00000509162 LCE3BQ5TA77 95 aa6.62□□□□□ -1.35
TOPBP1-207ENST00000509162 PRAMEF20Q5VT98 475 aa6.62□□□□□ -1.35
TOPBP1-207ENST00000509162 IRAK1BP1Q5VVH5 260 aa6.62□□□□□ -1.35
TOPBP1-207ENST00000509162 IL23RQ5VWK5 629 aa6.62□□□□□ -1.35
TOPBP1-207ENST00000509162 SLC25A25Q6KCM7 469 aa6.62□□□□□ -1.35
TOPBP1-207ENST00000509162 IL20RBQ6UXL0 311 aa6.62□□□□□ -1.35
TOPBP1-207ENST00000509162 LARP4Q71RC2 724 aaKnown RBP eCLIP6.62□□□□□ -1.35
TOPBP1-207ENST00000509162 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.62□□□□□ -1.35
TOPBP1-207ENST00000509162 ZAR1Q86SH2 424 aa6.62□□□□□ -1.35
TOPBP1-207ENST00000509162 SPPL2CQ8IUH8 684 aa6.62□□□□□ -1.35
TOPBP1-207ENST00000509162 WDR75Q8IWA0 830 aaKnown RBP6.62□□□□□ -1.35
TOPBP1-207ENST00000509162 CLECL1Q8IZS7 167 aa6.62□□□□□ -1.35
TOPBP1-207ENST00000509162 CLEC4FQ8N1N0 589 aa6.62□□□□□ -1.35
TOPBP1-207ENST00000509162 OR2L13Q8N349 312 aa6.62□□□□□ -1.35
TOPBP1-207ENST00000509162 ZFP62Q8NB50 900 aaPredicted RBP6.62□□□□□ -1.35
TOPBP1-207ENST00000509162 GALNT11Q8NCW6 608 aa6.62□□□□□ -1.35
TOPBP1-207ENST00000509162 PSD4Q8NDX1 1056 aa6.62□□□□□ -1.35
TOPBP1-207ENST00000509162 FBXO30Q8TB52 745 aa6.62□□□□□ -1.35
TOPBP1-207ENST00000509162 PAQR8Q8TEZ7 354 aa6.62□□□□□ -1.35
TOPBP1-207ENST00000509162 FAR1Q8WVX9 515 aa6.62□□□□□ -1.35
TOPBP1-207ENST00000509162 TM9SF4Q92544 642 aa6.62□□□□□ -1.35
TOPBP1-207ENST00000509162 SPACA9Q96E40 222 aaPredicted RBP6.62□□□□□ -1.35
TOPBP1-207ENST00000509162 VPS50Q96JG6 964 aa6.62□□□□□ -1.35
TOPBP1-207ENST00000509162 BTBD9Q96Q07 612 aa6.62□□□□□ -1.35
TOPBP1-207ENST00000509162 NODALQ96S42 347 aa6.62□□□□□ -1.35
TOPBP1-207ENST00000509162 PAIP2Q9BPZ3 127 aaKnown RBP6.62□□□□□ -1.35
TOPBP1-207ENST00000509162 UTP23Q9BRU9 249 aaKnown RBP6.62□□□□□ -1.35
TOPBP1-207ENST00000509162 PELOQ9BRX2 385 aaKnown RBP6.62□□□□□ -1.35
TOPBP1-207ENST00000509162 FAIM2Q9BWQ8 316 aa6.62□□□□□ -1.35
TOPBP1-207ENST00000509162 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.62□□□□□ -1.35
TOPBP1-207ENST00000509162 REEP4Q9H6H4 257 aa6.62□□□□□ -1.35
TOPBP1-207ENST00000509162 ZNF703Q9H7S9 590 aaPredicted RBP6.62□□□□□ -1.35
TOPBP1-207ENST00000509162 CXorf36Q9H7Y0 433 aa6.62□□□□□ -1.35
TOPBP1-207ENST00000509162 VIPAS39Q9H9C1 493 aa6.62□□□□□ -1.35
TOPBP1-207ENST00000509162 WDR41Q9HAD4 459 aa6.62□□□□□ -1.35
TOPBP1-207ENST00000509162 MEAF6Q9HAF1 191 aa6.62□□□□□ -1.35
TOPBP1-207ENST00000509162 FOLH1BQ9HBA9 442 aa6.62□□□□□ -1.35
TOPBP1-207ENST00000509162 TUBA8Q9NY65 449 aaPredicted RBP6.62□□□□□ -1.35
TOPBP1-207ENST00000509162 TAS2R7Q9NYW3 318 aa6.62□□□□□ -1.35
TOPBP1-207ENST00000509162 AHSPQ9NZD4 102 aa6.62□□□□□ -1.35
TOPBP1-207ENST00000509162 ABI3Q9P2A4 366 aa6.62□□□□□ -1.35
TOPBP1-207ENST00000509162 ATP6V1HQ9UI12 483 aa6.62□□□□□ -1.35
TOPBP1-207ENST00000509162 YARS2Q9Y2Z4 477 aaKnown RBP6.62□□□□□ -1.35
TOPBP1-207ENST00000509162 PCDHGB6Q9Y5F9 930 aa6.62□□□□□ -1.35
TOPBP1-207ENST00000509162 MED12Q93074 2177 aa6.61□□□□□ -1.35
TOPBP1-207ENST00000509162 FLNBO75369 2602 aaKnown RBP6.61□□□□□ -1.35
TOPBP1-207ENST00000509162 UQCRHLA0A096LP55 91 aa6.61□□□□□ -1.35
TOPBP1-207ENST00000509162 GOLGA8QA0A0J9YX86 632 aa6.61□□□□□ -1.35
TOPBP1-207ENST00000509162 CENPVL1A0A0U1RR11 272 aa6.61□□□□□ -1.35
TOPBP1-207ENST00000509162 GXYLT2A0PJZ3 443 aa6.61□□□□□ -1.35
TOPBP1-207ENST00000509162 GOLGA8OA6NCC3 632 aa6.61□□□□□ -1.35
TOPBP1-207ENST00000509162 GOLGA6L10A6NI86 522 aa6.61□□□□□ -1.35
TOPBP1-207ENST00000509162 OR6C76A6NM76 312 aa6.61□□□□□ -1.35
TOPBP1-207ENST00000509162 KDM4EB2RXH2 506 aaPredicted RBP6.61□□□□□ -1.35
TOPBP1-207ENST00000509162 GOLGA8NF8WBI6 632 aa6.61□□□□□ -1.35
TOPBP1-207ENST00000509162 KLF11O14901 512 aa6.61□□□□□ -1.35
TOPBP1-207ENST00000509162 PEX1O43933 1283 aa6.61□□□□□ -1.35
TOPBP1-207ENST00000509162 PLOD3O60568 738 aa6.61□□□□□ -1.35
TOPBP1-207ENST00000509162 TSPAN2O60636 221 aa6.61□□□□□ -1.35
TOPBP1-207ENST00000509162 UGT2B11O75310 529 aa6.61□□□□□ -1.35
TOPBP1-207ENST00000509162 UQCRHP07919 91 aa6.61□□□□□ -1.35
TOPBP1-207ENST00000509162 RFPL3SP0C7P2 107 aa6.61□□□□□ -1.35
TOPBP1-207ENST00000509162 GRK2P25098 689 aa6.61□□□□□ -1.35
TOPBP1-207ENST00000509162 ABCD3P28288 659 aa6.61□□□□□ -1.35
TOPBP1-207ENST00000509162 EPHA3P29320 983 aa6.61□□□□□ -1.35
TOPBP1-207ENST00000509162 TLX1P31314 330 aaPredicted RBP6.61□□□□□ -1.35
TOPBP1-207ENST00000509162 CYB561P49447 251 aa6.61□□□□□ -1.35
TOPBP1-207ENST00000509162 NCBP2P52298 156 aaKnown RBP eCLIP6.61□□□□□ -1.35
TOPBP1-207ENST00000509162 C21orf58P58505 322 aa6.61□□□□□ -1.35
TOPBP1-207ENST00000509162 PSG6Q00889 435 aa6.61□□□□□ -1.35
TOPBP1-207ENST00000509162 HSPB3Q12988 150 aa6.61□□□□□ -1.35
TOPBP1-207ENST00000509162 CDSNQ15517 529 aa6.61□□□□□ -1.35
TOPBP1-207ENST00000509162 FXNQ16595 210 aa6.61□□□□□ -1.35
TOPBP1-207ENST00000509162 NTRK2Q16620 822 aa6.61□□□□□ -1.35
TOPBP1-207ENST00000509162 HHATQ5VTY9 493 aa6.61□□□□□ -1.35
TOPBP1-207ENST00000509162 GK5Q6ZS86 529 aa6.61□□□□□ -1.35
TOPBP1-207ENST00000509162 OLIG3Q7RTU3 272 aa6.61□□□□□ -1.35
TOPBP1-207ENST00000509162 CAMKMTQ7Z624 323 aa6.61□□□□□ -1.35
TOPBP1-207ENST00000509162 FAM9CQ8IZT9 166 aa6.61□□□□□ -1.35
TOPBP1-207ENST00000509162 FBXW8Q8N3Y1 598 aa6.61□□□□□ -1.35
TOPBP1-207ENST00000509162 RPRMLQ8N4K4 120 aa6.61□□□□□ -1.35
TOPBP1-207ENST00000509162 MARVELD2Q8N4S9 558 aa6.61□□□□□ -1.35
TOPBP1-207ENST00000509162 FNDC5Q8NAU1 212 aa6.61□□□□□ -1.35
TOPBP1-207ENST00000509162 ST6GALNAC3Q8NDV1 305 aa6.61□□□□□ -1.35
TOPBP1-207ENST00000509162 OR2M7Q8NG81 312 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms