RNA–Protein interactions for RNA: ENST00000508902.5

CLDND1-220, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 916 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-220ENST00000508902 GALNT9Q9HCQ5 603 aa16.65■□□□□ 0.26
CLDND1-220ENST00000508902 THAP1Q9NVV9 213 aa16.65■□□□□ 0.26
CLDND1-220ENST00000508902 ZNF446Q9NWS9 450 aa16.65■□□□□ 0.26
CLDND1-220ENST00000508902 CNIH4Q9P003 139 aa16.65■□□□□ 0.26
CLDND1-220ENST00000508902 SH3BGRL2Q9UJC5 107 aa16.65■□□□□ 0.26
CLDND1-220ENST00000508902 CRYBG3Q68DQ2 2970 aa16.64■□□□□ 0.25
CLDND1-220ENST00000508902 CACNA1CQ13936 2221 aa16.64■□□□□ 0.25
CLDND1-220ENST00000508902 GXYLT2A0PJZ3 443 aa16.64■□□□□ 0.25
CLDND1-220ENST00000508902 ANKRD33BA6NCL7 494 aa16.64■□□□□ 0.25
CLDND1-220ENST00000508902 C2orf72A6NCS6 295 aa16.64■□□□□ 0.25
CLDND1-220ENST00000508902 CDC40O60508 579 aaKnown RBP eCLIP16.64■□□□□ 0.25
CLDND1-220ENST00000508902 BCAS2O75934 225 aaPredicted RBP16.64■□□□□ 0.25
CLDND1-220ENST00000508902 CLDN1O95832 211 aa16.64■□□□□ 0.25
CLDND1-220ENST00000508902 IGKV1D-16P01601 117 aa16.64■□□□□ 0.25
CLDND1-220ENST00000508902 IGHG3P01860 377 aa16.64■□□□□ 0.25
CLDND1-220ENST00000508902 PRPS2P11908 318 aa16.64■□□□□ 0.25
CLDND1-220ENST00000508902 DCAF7P61962 342 aa16.64■□□□□ 0.25
CLDND1-220ENST00000508902 PHC1P78364 1004 aa16.64■□□□□ 0.25
CLDND1-220ENST00000508902 PLGLB1Q02325 96 aa16.64■□□□□ 0.25
CLDND1-220ENST00000508902 WDR75Q8IWA0 830 aaKnown RBP16.64■□□□□ 0.25
CLDND1-220ENST00000508902 SLC44A2Q8IWA5 706 aaPredicted RBP16.64■□□□□ 0.25
CLDND1-220ENST00000508902 ZNF75CPQ92670 426 aaPredicted RBP16.64■□□□□ 0.25
CLDND1-220ENST00000508902 COQ8BQ96D53 544 aa16.64■□□□□ 0.25
CLDND1-220ENST00000508902 TEX37Q96LM6 180 aa16.64■□□□□ 0.25
CLDND1-220ENST00000508902 LMF2Q9BU23 707 aaKnown RBP16.64■□□□□ 0.25
CLDND1-220ENST00000508902 RTN4RQ9BZR6 473 aa16.64■□□□□ 0.25
CLDND1-220ENST00000508902 UBQLN3Q9H347 655 aa16.64■□□□□ 0.25
CLDND1-220ENST00000508902 WDR55Q9H6Y2 383 aaPredicted RBP16.64■□□□□ 0.25
CLDND1-220ENST00000508902 MANSC1Q9H8J5 431 aa16.64■□□□□ 0.25
CLDND1-220ENST00000508902 VIPAS39Q9H9C1 493 aa16.64■□□□□ 0.25
CLDND1-220ENST00000508902 ZFP64Q9NPA5 681 aa16.64■□□□□ 0.25
CLDND1-220ENST00000508902 ACSS1Q9NUB1 689 aaPredicted RBP16.64■□□□□ 0.25
CLDND1-220ENST00000508902 DDX18Q9NVP1 670 aaKnown RBP16.64■□□□□ 0.25
CLDND1-220ENST00000508902 NKIRAS1Q9NYS0 192 aa16.64■□□□□ 0.25
CLDND1-220ENST00000508902 SPRR3Q9UBC9 169 aa16.64■□□□□ 0.25
CLDND1-220ENST00000508902 TNFRSF10DQ9UBN6 386 aa16.64■□□□□ 0.25
CLDND1-220ENST00000508902 TRGV8A0A0C4DH27 118 aa16.63■□□□□ 0.25
CLDND1-220ENST00000508902 ZG16O60844 167 aa16.63■□□□□ 0.25
CLDND1-220ENST00000508902 SLITRK5O94991 958 aa16.63■□□□□ 0.25
CLDND1-220ENST00000508902 SNUPNO95149 360 aaKnown RBP16.63■□□□□ 0.25
CLDND1-220ENST00000508902 KITP10721 976 aa16.63■□□□□ 0.25
CLDND1-220ENST00000508902 ACP2P11117 423 aa16.63■□□□□ 0.25
CLDND1-220ENST00000508902 NAGAP17050 411 aa16.63■□□□□ 0.25
CLDND1-220ENST00000508902 MAPK1P28482 360 aa16.63■□□□□ 0.25
CLDND1-220ENST00000508902 HPCAL1P37235 193 aa16.63■□□□□ 0.25
CLDND1-220ENST00000508902 CLDN8P56748 225 aa16.63■□□□□ 0.25
CLDND1-220ENST00000508902 NRG3P56975 720 aa16.63■□□□□ 0.25
CLDND1-220ENST00000508902 KCNJ2P63252 427 aa16.63■□□□□ 0.25
CLDND1-220ENST00000508902 ADORA2A-AS1P86434 159 aa16.63■□□□□ 0.25
CLDND1-220ENST00000508902 GAB1Q13480 694 aa16.63■□□□□ 0.25
CLDND1-220ENST00000508902 SMU1Q2TAY7 513 aa16.63■□□□□ 0.25
CLDND1-220ENST00000508902 TMEM81Q6P7N7 255 aa16.63■□□□□ 0.25
CLDND1-220ENST00000508902 C3P1Q6ZMU1 363 aa16.63■□□□□ 0.25
CLDND1-220ENST00000508902 BNC2Q6ZN30 1099 aaPredicted RBP16.63■□□□□ 0.25
CLDND1-220ENST00000508902 TRILQ7L0X0 811 aa16.63■□□□□ 0.25
CLDND1-220ENST00000508902 HDXQ7Z353 690 aa16.63■□□□□ 0.25
CLDND1-220ENST00000508902 CAMKMTQ7Z624 323 aa16.63■□□□□ 0.25
CLDND1-220ENST00000508902 DOLPP1Q86YN1 238 aa16.63■□□□□ 0.25
CLDND1-220ENST00000508902 FAM109AQ8N4B1 249 aa16.63■□□□□ 0.25
CLDND1-220ENST00000508902 RPRMLQ8N4K4 120 aa16.63■□□□□ 0.25
CLDND1-220ENST00000508902 FBXO30Q8TB52 745 aa16.63■□□□□ 0.25
CLDND1-220ENST00000508902 RAB3IL1Q8TBN0 382 aa16.63■□□□□ 0.25
CLDND1-220ENST00000508902 EFHD2Q96C19 240 aaPredicted RBP16.63■□□□□ 0.25
CLDND1-220ENST00000508902 OTUB1Q96FW1 271 aaPredicted RBP16.63■□□□□ 0.25
CLDND1-220ENST00000508902 CCDC120Q96HB5 630 aa16.63■□□□□ 0.25
CLDND1-220ENST00000508902 PHF12Q96QT6 1004 aa16.63■□□□□ 0.25
CLDND1-220ENST00000508902 SECISBP2Q96T21 854 aaKnown RBP16.63■□□□□ 0.25
CLDND1-220ENST00000508902 DOHHQ9BU89 302 aa16.63■□□□□ 0.25
CLDND1-220ENST00000508902 CXorf36Q9H7Y0 433 aa16.63■□□□□ 0.25
CLDND1-220ENST00000508902 EQTNQ9NQ60 294 aa16.63■□□□□ 0.25
CLDND1-220ENST00000508902 KIAA1549Q9HCM3 1950 aa16.63■□□□□ 0.25
CLDND1-220ENST00000508902 PHF3Q92576 2039 aaKnown RBP16.62■□□□□ 0.25
CLDND1-220ENST00000508902 OR6C70A6NIJ9 312 aa16.62■□□□□ 0.25
CLDND1-220ENST00000508902 KLF11O14901 512 aa16.62■□□□□ 0.25
CLDND1-220ENST00000508902 SCN2BO60939 215 aa16.62■□□□□ 0.25
CLDND1-220ENST00000508902 COQ9O75208 318 aa16.62■□□□□ 0.25
CLDND1-220ENST00000508902 C6orf47O95873 294 aa16.62■□□□□ 0.25
CLDND1-220ENST00000508902 EPHA3P29320 983 aa16.62■□□□□ 0.25
CLDND1-220ENST00000508902 IL12AP29459 219 aa16.62■□□□□ 0.25
CLDND1-220ENST00000508902 TMED10P49755 219 aaKnown RBP16.62■□□□□ 0.25
CLDND1-220ENST00000508902 GAS1P54826 345 aa16.62■□□□□ 0.25
CLDND1-220ENST00000508902 MLC1Q15049 377 aa16.62■□□□□ 0.25
CLDND1-220ENST00000508902 CDSNQ15517 529 aa16.62■□□□□ 0.25
CLDND1-220ENST00000508902 SLC9B1Q4ZJI4 515 aa16.62■□□□□ 0.25
CLDND1-220ENST00000508902 OGFOD2Q6N063 350 aa16.62■□□□□ 0.25
CLDND1-220ENST00000508902 NUP54Q7Z3B4 507 aa16.62■□□□□ 0.25
CLDND1-220ENST00000508902 ZAR1Q86SH2 424 aa16.62■□□□□ 0.25
CLDND1-220ENST00000508902 SLC22A16Q86VW1 577 aa16.62■□□□□ 0.25
CLDND1-220ENST00000508902 HOMEZQ8IX15 550 aa16.62■□□□□ 0.25
CLDND1-220ENST00000508902 PSMA8Q8TAA3 256 aa16.62■□□□□ 0.25
CLDND1-220ENST00000508902 FAM120BQ96EK7 910 aaKnown RBP16.62■□□□□ 0.25
CLDND1-220ENST00000508902 ZBED6CLQ96FA7 236 aaPredicted RBP16.62■□□□□ 0.25
CLDND1-220ENST00000508902 C16orf58Q96GQ5 468 aa16.62■□□□□ 0.25
CLDND1-220ENST00000508902 MAELQ96JY0 434 aaKnown RBP16.62■□□□□ 0.25
CLDND1-220ENST00000508902 COL21A1Q96P44 957 aa16.62■□□□□ 0.25
CLDND1-220ENST00000508902 ADOQ96SZ5 270 aa16.62■□□□□ 0.25
CLDND1-220ENST00000508902 SLC6A15Q9H2J7 730 aa16.62■□□□□ 0.25
CLDND1-220ENST00000508902 SLCO1B3Q9NPD5 702 aa16.62■□□□□ 0.25
CLDND1-220ENST00000508902 RYDENQ9NUL5 291 aaKnown RBP16.62■□□□□ 0.25
CLDND1-220ENST00000508902 TAS2R9Q9NYW1 312 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms