RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 ROR2Q01974 943 aaKnown RBP3.69□□□□□ -1.82
NEDD4-209ENST00000508871 SLBPQ14493 270 aaKnown RBP eCLIP3.69□□□□□ -1.82
NEDD4-209ENST00000508871 MESDQ14696 234 aa3.69□□□□□ -1.82
NEDD4-209ENST00000508871 HERC3Q15034 1050 aa3.69□□□□□ -1.82
NEDD4-209ENST00000508871 UPP1Q16831 310 aa3.69□□□□□ -1.82
NEDD4-209ENST00000508871 AKIRIN2Q53H80 203 aa3.69□□□□□ -1.82
NEDD4-209ENST00000508871 ELFN2Q5R3F8 820 aa3.69□□□□□ -1.82
NEDD4-209ENST00000508871 PDSS1Q5T2R2 415 aa3.69□□□□□ -1.82
NEDD4-209ENST00000508871 PAPD7Q5XG87 772 aaKnown RBP3.69□□□□□ -1.82
NEDD4-209ENST00000508871 LYSMD4Q5XG99 296 aa3.69□□□□□ -1.82
NEDD4-209ENST00000508871 TPGS2Q68CL5 300 aa3.69□□□□□ -1.82
NEDD4-209ENST00000508871 ANKRD34AQ69YU3 496 aa3.69□□□□□ -1.82
NEDD4-209ENST00000508871 RAD9BQ6WBX8 426 aa3.69□□□□□ -1.82
NEDD4-209ENST00000508871 CDHR3Q6ZTQ4 885 aa3.69□□□□□ -1.82
NEDD4-209ENST00000508871 PIWIL4Q7Z3Z4 852 aaKnown RBP3.69□□□□□ -1.82
NEDD4-209ENST00000508871 SPPL2CQ8IUH8 684 aa3.69□□□□□ -1.82
NEDD4-209ENST00000508871 BOD1L2Q8IYS8 172 aa3.69□□□□□ -1.82
NEDD4-209ENST00000508871 WNT8BQ93098 351 aa3.69□□□□□ -1.82
NEDD4-209ENST00000508871 HSFY1Q96LI6 401 aa3.69□□□□□ -1.82
NEDD4-209ENST00000508871 ZNF317Q96PQ6 595 aaPredicted RBP3.69□□□□□ -1.82
NEDD4-209ENST00000508871 CMSS1Q9BQ75 279 aaKnown RBP3.69□□□□□ -1.82
NEDD4-209ENST00000508871 GDF3Q9NR23 364 aa3.69□□□□□ -1.82
NEDD4-209ENST00000508871 KLHL9Q9P2J3 617 aa3.69□□□□□ -1.82
NEDD4-209ENST00000508871 ZNF282Q9UDV7 671 aaPredicted RBP3.69□□□□□ -1.82
NEDD4-209ENST00000508871 FZR1Q9UM11 496 aa3.69□□□□□ -1.82
NEDD4-209ENST00000508871 URGCP-MRPS24S4R325 110 aa3.69□□□□□ -1.82
NEDD4-209ENST00000508871 SMCHD1A6NHR9 2005 aa3.69□□□□□ -1.82
NEDD4-209ENST00000508871 A0A1W2PRB8 838 aa3.69□□□□□ -1.82
NEDD4-209ENST00000508871 ELOA3DA6NLF2 546 aaPredicted RBP3.69□□□□□ -1.82
NEDD4-209ENST00000508871 OR52A4PA6NMU1 304 aa3.69□□□□□ -1.82
NEDD4-209ENST00000508871 MCIDASD6RGH6 385 aa3.69□□□□□ -1.82
NEDD4-209ENST00000508871 DVL1O14640 695 aa3.69□□□□□ -1.82
NEDD4-209ENST00000508871 NKX2-8O15522 239 aa3.69□□□□□ -1.82
NEDD4-209ENST00000508871 LDB2O43679 373 aa3.69□□□□□ -1.82
NEDD4-209ENST00000508871 SELENOFO60613 162 aa3.69□□□□□ -1.82
NEDD4-209ENST00000508871 GSRP00390 522 aa3.69□□□□□ -1.82
NEDD4-209ENST00000508871 APEHP13798 732 aaKnown RBP3.69□□□□□ -1.82
NEDD4-209ENST00000508871 GABRB3P28472 473 aa3.69□□□□□ -1.82
NEDD4-209ENST00000508871 UQCRC1P31930 480 aa3.69□□□□□ -1.82
NEDD4-209ENST00000508871 SLCO1A2P46721 670 aa3.69□□□□□ -1.82
NEDD4-209ENST00000508871 DVL1P1P54792 670 aaPredicted RBP3.69□□□□□ -1.82
NEDD4-209ENST00000508871 RPS7P62081 194 aaKnown RBP3.69□□□□□ -1.82
NEDD4-209ENST00000508871 TMEM132DQ14C87 1099 aa3.69□□□□□ -1.82
NEDD4-209ENST00000508871 ZXDCQ2QGD7 858 aaPredicted RBP3.69□□□□□ -1.82
NEDD4-209ENST00000508871 HECTD2Q5U5R9 776 aa3.69□□□□□ -1.82
NEDD4-209ENST00000508871 OR52W1Q6IF63 320 aa3.69□□□□□ -1.82
NEDD4-209ENST00000508871 ADNP2Q6IQ32 1131 aa3.69□□□□□ -1.82
NEDD4-209ENST00000508871 WDR59Q6PJI9 974 aa3.69□□□□□ -1.82
NEDD4-209ENST00000508871 FRRS1Q6ZNA5 592 aa3.69□□□□□ -1.82
NEDD4-209ENST00000508871 UBE3DQ7Z6J8 389 aa3.69□□□□□ -1.82
NEDD4-209ENST00000508871 TMED4Q7Z7H5 227 aa3.69□□□□□ -1.82
NEDD4-209ENST00000508871 MARCH9Q86YJ5 346 aa3.69□□□□□ -1.82
NEDD4-209ENST00000508871 RNF149Q8NC42 400 aa3.69□□□□□ -1.82
NEDD4-209ENST00000508871 NPEPL1Q8NDH3 523 aa3.69□□□□□ -1.82
NEDD4-209ENST00000508871 TMEM161BQ8NDZ6 487 aa3.69□□□□□ -1.82
NEDD4-209ENST00000508871 KBTBD8Q8NFY9 601 aa3.69□□□□□ -1.82
NEDD4-209ENST00000508871 ELOA3Q8NG57 546 aa3.69□□□□□ -1.82
NEDD4-209ENST00000508871 OR5D13Q8NGL4 314 aa3.69□□□□□ -1.82
NEDD4-209ENST00000508871 MFSD8Q8NHS3 518 aa3.69□□□□□ -1.82
NEDD4-209ENST00000508871 RAB40AQ8WXH6 277 aa3.69□□□□□ -1.82
NEDD4-209ENST00000508871 MARS2Q96GW9 593 aaKnown RBP3.69□□□□□ -1.82
NEDD4-209ENST00000508871 PPIL3Q9H2H8 161 aaKnown RBP3.69□□□□□ -1.82
NEDD4-209ENST00000508871 CATSPERBQ9H7T0 1116 aa3.69□□□□□ -1.82
NEDD4-209ENST00000508871 CXorf36Q9H7Y0 433 aa3.69□□□□□ -1.82
NEDD4-209ENST00000508871 SIX2Q9NPC8 291 aa3.69□□□□□ -1.82
NEDD4-209ENST00000508871 SLC17A5Q9NRA2 495 aa3.69□□□□□ -1.82
NEDD4-209ENST00000508871 MED17Q9NVC6 651 aa3.69□□□□□ -1.82
NEDD4-209ENST00000508871 TMEM9Q9P0T7 183 aa3.69□□□□□ -1.82
NEDD4-209ENST00000508871 PLEKHB1Q9UF11 243 aaPredicted RBP3.69□□□□□ -1.82
NEDD4-209ENST00000508871 COQ4Q9Y3A0 265 aa3.69□□□□□ -1.82
NEDD4-209ENST00000508871 NR2E1Q9Y466 385 aa3.69□□□□□ -1.82
NEDD4-209ENST00000508871 OAS3Q9Y6K5 1087 aaKnown RBP3.69□□□□□ -1.82
NEDD4-209ENST00000508871 TANC1Q9C0D5 1861 aa3.69□□□□□ -1.82
NEDD4-209ENST00000508871 A0A087WWL8 130 aa3.69□□□□□ -1.82
NEDD4-209ENST00000508871 SHOXO15266 292 aa3.69□□□□□ -1.82
NEDD4-209ENST00000508871 RAD51CO43502 376 aa3.69□□□□□ -1.82
NEDD4-209ENST00000508871 POP4O95707 220 aaKnown RBP3.69□□□□□ -1.82
NEDD4-209ENST00000508871 NUDT17P0C025 328 aa3.69□□□□□ -1.82
NEDD4-209ENST00000508871 SLURP2P0DP57 97 aa3.69□□□□□ -1.82
NEDD4-209ENST00000508871 NID1P14543 1247 aa3.69□□□□□ -1.82
NEDD4-209ENST00000508871 KDELR2P33947 212 aa3.69□□□□□ -1.82
NEDD4-209ENST00000508871 MATKP42679 507 aa3.69□□□□□ -1.82
NEDD4-209ENST00000508871 VAMP7P51809 220 aa3.69□□□□□ -1.82
NEDD4-209ENST00000508871 GPR143P51810 404 aa3.69□□□□□ -1.82
NEDD4-209ENST00000508871 XIAPP98170 497 aa3.69□□□□□ -1.82
NEDD4-209ENST00000508871 PLOD1Q02809 727 aaPredicted RBP3.69□□□□□ -1.82
NEDD4-209ENST00000508871 LY6KQ17RY6 165 aa3.69□□□□□ -1.82
NEDD4-209ENST00000508871 FAM214AQ32MH5 1076 aa3.69□□□□□ -1.82
NEDD4-209ENST00000508871 C1orf146Q5VVC0 180 aa3.69□□□□□ -1.82
NEDD4-209ENST00000508871 SPRYD7Q5W111 196 aa3.69□□□□□ -1.82
NEDD4-209ENST00000508871 HTR3DQ70Z44 454 aa3.69□□□□□ -1.82
NEDD4-209ENST00000508871 UNC93AQ86WB7 457 aa3.69□□□□□ -1.82
NEDD4-209ENST00000508871 SLC35F3Q8IY50 421 aa3.69□□□□□ -1.82
NEDD4-209ENST00000508871 LIX1Q8N485 282 aa3.69□□□□□ -1.82
NEDD4-209ENST00000508871 SYT14Q8NB59 555 aa3.69□□□□□ -1.82
NEDD4-209ENST00000508871 SLC5A11Q8WWX8 675 aa3.69□□□□□ -1.82
NEDD4-209ENST00000508871 EEF1AKMT3Q96AZ1 226 aa3.69□□□□□ -1.82
NEDD4-209ENST00000508871 ZHX1-C8orf76Q96EF9 292 aa3.69□□□□□ -1.82
NEDD4-209ENST00000508871 LINC00615Q96LM1 132 aaPredicted RBP3.69□□□□□ -1.82
NEDD4-209ENST00000508871 GPR20Q99678 358 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms