RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 OPN1LWP04000 364 aa6.37□□□□□ -1.39
VCAN-207ENST00000507162 APRTP07741 180 aa6.37□□□□□ -1.39
VCAN-207ENST00000507162 C1GALT1C1LP0DN25 315 aa6.37□□□□□ -1.39
VCAN-207ENST00000507162 ATP5A1P25705 553 aaKnown RBP6.37□□□□□ -1.39
VCAN-207ENST00000507162 TLX1P31314 330 aaPredicted RBP6.37□□□□□ -1.39
VCAN-207ENST00000507162 HPDP32754 393 aaPredicted RBP6.37□□□□□ -1.39
VCAN-207ENST00000507162 FDFT1P37268 417 aa6.37□□□□□ -1.39
VCAN-207ENST00000507162 KCNC1P48547 511 aa6.37□□□□□ -1.39
VCAN-207ENST00000507162 RGS4P49798 205 aa6.37□□□□□ -1.39
VCAN-207ENST00000507162 DSCR4P56555 118 aaPredicted RBP6.37□□□□□ -1.39
VCAN-207ENST00000507162 HMGCS1Q01581 520 aa6.37□□□□□ -1.39
VCAN-207ENST00000507162 SRSF4Q08170 494 aaKnown RBP6.37□□□□□ -1.39
VCAN-207ENST00000507162 KLF1Q13351 362 aaPredicted RBP6.37□□□□□ -1.39
VCAN-207ENST00000507162 SLBPQ14493 270 aaKnown RBP eCLIP6.37□□□□□ -1.39
VCAN-207ENST00000507162 AP5B1Q2VPB7 878 aa6.37□□□□□ -1.39
VCAN-207ENST00000507162 C18orf63Q68DL7 685 aa6.37□□□□□ -1.39
VCAN-207ENST00000507162 AADACL2Q6P093 401 aa6.37□□□□□ -1.39
VCAN-207ENST00000507162 B3GLCTQ6Y288 498 aa6.37□□□□□ -1.39
VCAN-207ENST00000507162 BHLHA15Q7RTS1 189 aaPredicted RBP6.37□□□□□ -1.39
VCAN-207ENST00000507162 GALNT12Q8IXK2 581 aa6.37□□□□□ -1.39
VCAN-207ENST00000507162 KRT78Q8N1N4 520 aa6.37□□□□□ -1.39
VCAN-207ENST00000507162 MYO1HQ8N1T3 1032 aa6.37□□□□□ -1.39
VCAN-207ENST00000507162 BPIFB2Q8N4F0 458 aa6.37□□□□□ -1.39
VCAN-207ENST00000507162 SPATA6LQ8N4H0 392 aa6.37□□□□□ -1.39
VCAN-207ENST00000507162 ACOT4Q8N9L9 421 aa6.37□□□□□ -1.39
VCAN-207ENST00000507162 TAF15Q92804 592 aaKnown RBP eCLIP6.37□□□□□ -1.39
VCAN-207ENST00000507162 KCNJ9Q92806 393 aa6.37□□□□□ -1.39
VCAN-207ENST00000507162 TANKQ92844 425 aa6.37□□□□□ -1.39
VCAN-207ENST00000507162 FBXL8Q96CD0 374 aa6.37□□□□□ -1.39
VCAN-207ENST00000507162 OMA1Q96E52 524 aa6.37□□□□□ -1.39
VCAN-207ENST00000507162 FBXO17Q96EF6 278 aa6.37□□□□□ -1.39
VCAN-207ENST00000507162 SORCS2Q96PQ0 1159 aa6.37□□□□□ -1.39
VCAN-207ENST00000507162 DUX5Q96PT3 197 aa6.37□□□□□ -1.39
VCAN-207ENST00000507162 SLC6A7Q99884 636 aa6.37□□□□□ -1.39
VCAN-207ENST00000507162 POTEKPQ9BYX7 375 aa6.37□□□□□ -1.39
VCAN-207ENST00000507162 ROGDIQ9GZN7 287 aa6.37□□□□□ -1.39
VCAN-207ENST00000507162 NXF5Q9H1B4 397 aaKnown RBP6.37□□□□□ -1.39
VCAN-207ENST00000507162 OR10A5Q9H207 317 aa6.37□□□□□ -1.39
VCAN-207ENST00000507162 DSN1Q9H410 356 aa6.37□□□□□ -1.39
VCAN-207ENST00000507162 SMYD2Q9NRG4 433 aa6.37□□□□□ -1.39
VCAN-207ENST00000507162 HIF1ANQ9NWT6 349 aa6.37□□□□□ -1.39
VCAN-207ENST00000507162 BFARQ9NZS9 450 aa6.37□□□□□ -1.39
VCAN-207ENST00000507162 TRMT6Q9UJA5 497 aaKnown RBP6.37□□□□□ -1.39
VCAN-207ENST00000507162 MED16Q9Y2X0 877 aa6.37□□□□□ -1.39
VCAN-207ENST00000507162 GRIP1Q9Y3R0 1128 aa6.37□□□□□ -1.39
VCAN-207ENST00000507162 EPPK1P58107 5090 aaKnown RBP6.37□□□□□ -1.39
VCAN-207ENST00000507162 ARFGEF3Q5TH69 2177 aa6.37□□□□□ -1.39
VCAN-207ENST00000507162 GLOD5A6NK44 160 aa6.36□□□□□ -1.39
VCAN-207ENST00000507162 B4DSR2 109 aa6.36□□□□□ -1.39
VCAN-207ENST00000507162 NDUFB5O43674 189 aa6.36□□□□□ -1.39
VCAN-207ENST00000507162 LILRA1O75019 489 aa6.36□□□□□ -1.39
VCAN-207ENST00000507162 UGT2B11O75310 529 aa6.36□□□□□ -1.39
VCAN-207ENST00000507162 REM1O75628 298 aa6.36□□□□□ -1.39
VCAN-207ENST00000507162 LYZL6O75951 148 aa6.36□□□□□ -1.39
VCAN-207ENST00000507162 PDE5AO76074 875 aa6.36□□□□□ -1.39
VCAN-207ENST00000507162 STAMBPO95630 424 aa6.36□□□□□ -1.39
VCAN-207ENST00000507162 GPR75O95800 540 aa6.36□□□□□ -1.39
VCAN-207ENST00000507162 TBX6O95947 436 aaPredicted RBP6.36□□□□□ -1.39
VCAN-207ENST00000507162 IFNB1P01574 187 aa6.36□□□□□ -1.39
VCAN-207ENST00000507162 PRB2P02812 416 aaPredicted RBP6.36□□□□□ -1.39
VCAN-207ENST00000507162 TUBBP07437 444 aa6.36□□□□□ -1.39
VCAN-207ENST00000507162 DHRS4L1P0CG22 281 aa6.36□□□□□ -1.39
VCAN-207ENST00000507162 NAGAP17050 411 aa6.36□□□□□ -1.39
VCAN-207ENST00000507162 OGNP20774 298 aaKnown RBP6.36□□□□□ -1.39
VCAN-207ENST00000507162 GRK2P25098 689 aa6.36□□□□□ -1.39
VCAN-207ENST00000507162 CETN2P41208 172 aa6.36□□□□□ -1.39
VCAN-207ENST00000507162 NPY2RP49146 381 aa6.36□□□□□ -1.39
VCAN-207ENST00000507162 ZNF83P51522 516 aa6.36□□□□□ -1.39
VCAN-207ENST00000507162 SPOCK1Q08629 439 aa6.36□□□□□ -1.39
VCAN-207ENST00000507162 PLCXD2Q0VAA5 305 aa6.36□□□□□ -1.39
VCAN-207ENST00000507162 SLAMF1Q13291 335 aa6.36□□□□□ -1.39
VCAN-207ENST00000507162 SP140Q13342 867 aa6.36□□□□□ -1.39
VCAN-207ENST00000507162 ITGADQ13349 1161 aa6.36□□□□□ -1.39
VCAN-207ENST00000507162 SLMAPQ14BN4 828 aa6.36□□□□□ -1.39
VCAN-207ENST00000507162 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.36□□□□□ -1.39
VCAN-207ENST00000507162 ZSWIM7Q19AV6 140 aa6.36□□□□□ -1.39
VCAN-207ENST00000507162 SPRED3Q2MJR0 410 aa6.36□□□□□ -1.39
VCAN-207ENST00000507162 ZNF544Q6NX49 715 aa6.36□□□□□ -1.39
VCAN-207ENST00000507162 TMEM81Q6P7N7 255 aa6.36□□□□□ -1.39
VCAN-207ENST00000507162 PAQR3Q6TCH7 311 aa6.36□□□□□ -1.39
VCAN-207ENST00000507162 SASS6Q6UVJ0 657 aa6.36□□□□□ -1.39
VCAN-207ENST00000507162 UGT2A3Q6UWM9 527 aa6.36□□□□□ -1.39
VCAN-207ENST00000507162 TMEM108Q6UXF1 575 aa6.36□□□□□ -1.39
VCAN-207ENST00000507162 NUFIP2Q7Z417 695 aaKnown RBP6.36□□□□□ -1.39
VCAN-207ENST00000507162 UBE3DQ7Z6J8 389 aa6.36□□□□□ -1.39
VCAN-207ENST00000507162 PRUNE1Q86TP1 453 aa6.36□□□□□ -1.39
VCAN-207ENST00000507162 EXOC3L1Q86VI1 746 aa6.36□□□□□ -1.39
VCAN-207ENST00000507162 GABRG1Q8N1C3 465 aa6.36□□□□□ -1.39
VCAN-207ENST00000507162 METTL25Q8N6Q8 603 aa6.36□□□□□ -1.39
VCAN-207ENST00000507162 ADCY4Q8NFM4 1077 aa6.36□□□□□ -1.39
VCAN-207ENST00000507162 OR52B6Q8NGF0 335 aa6.36□□□□□ -1.39
VCAN-207ENST00000507162 C22orf15Q8WYQ4 148 aa6.36□□□□□ -1.39
VCAN-207ENST00000507162 ANKRD7Q92527 254 aa6.36□□□□□ -1.39
VCAN-207ENST00000507162 UBE2FQ969M7 185 aa6.36□□□□□ -1.39
VCAN-207ENST00000507162 TMCO6Q96DC7 493 aa6.36□□□□□ -1.39
VCAN-207ENST00000507162 LINGO1Q96FE5 620 aa6.36□□□□□ -1.39
VCAN-207ENST00000507162 VPS39Q96JC1 886 aa6.36□□□□□ -1.39
VCAN-207ENST00000507162 KCNC2Q96PR1 638 aa6.36□□□□□ -1.39
VCAN-207ENST00000507162 LRRC37BQ96QE4 947 aa6.36□□□□□ -1.39
VCAN-207ENST00000507162 USB1Q9BQ65 265 aaKnown RBP6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms