RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 EIF4E1BA6NMX2 242 aaKnown RBP7.81□□□□□ -1.16
PDGFC-205ENST00000506880 A8MUA0 341 aa7.81□□□□□ -1.16
PDGFC-205ENST00000506880 EVPLLA8MZ36 301 aa7.81□□□□□ -1.16
PDGFC-205ENST00000506880 LINC01387J3KSC0 135 aa7.81□□□□□ -1.16
PDGFC-205ENST00000506880 ANGPT2O15123 496 aa7.81□□□□□ -1.16
PDGFC-205ENST00000506880 NME2P1O60361 137 aa7.81□□□□□ -1.16
PDGFC-205ENST00000506880 PRKRAO75569 313 aaKnown RBP7.81□□□□□ -1.16
PDGFC-205ENST00000506880 SLC25A12O75746 678 aa7.81□□□□□ -1.16
PDGFC-205ENST00000506880 OR2J2O76002 312 aa7.81□□□□□ -1.16
PDGFC-205ENST00000506880 SORBS2O94875 1100 aaKnown RBP7.81□□□□□ -1.16
PDGFC-205ENST00000506880 LRATO95237 230 aa7.81□□□□□ -1.16
PDGFC-205ENST00000506880 IL33O95760 270 aa7.81□□□□□ -1.16
PDGFC-205ENST00000506880 WDPCPO95876 746 aa7.81□□□□□ -1.16
PDGFC-205ENST00000506880 SP1P08047 785 aa7.81□□□□□ -1.16
PDGFC-205ENST00000506880 CT62P0C5K7 136 aa7.81□□□□□ -1.16
PDGFC-205ENST00000506880 FAM87AP0C7U9 286 aa7.81□□□□□ -1.16
PDGFC-205ENST00000506880 NCF2P19878 526 aaPredicted RBP7.81□□□□□ -1.16
PDGFC-205ENST00000506880 CNR1P21554 472 aa7.81□□□□□ -1.16
PDGFC-205ENST00000506880 DRD4P21917 467 aa7.81□□□□□ -1.16
PDGFC-205ENST00000506880 NME2P22392 152 aa7.81□□□□□ -1.16
PDGFC-205ENST00000506880 MSX1P28360 303 aa7.81□□□□□ -1.16
PDGFC-205ENST00000506880 SSTR4P31391 388 aa7.81□□□□□ -1.16
PDGFC-205ENST00000506880 SOX18P35713 384 aa7.81□□□□□ -1.16
PDGFC-205ENST00000506880 ADH7P40394 386 aa7.81□□□□□ -1.16
PDGFC-205ENST00000506880 MC3RP41968 323 aa7.81□□□□□ -1.16
PDGFC-205ENST00000506880 KHKP50053 298 aa7.81□□□□□ -1.16
PDGFC-205ENST00000506880 ID2Q02363 134 aa7.81□□□□□ -1.16
PDGFC-205ENST00000506880 RBBP4Q09028 425 aa7.81□□□□□ -1.16
PDGFC-205ENST00000506880 HSPB3Q12988 150 aa7.81□□□□□ -1.16
PDGFC-205ENST00000506880 CYLC2Q14093 348 aaPredicted RBP7.81□□□□□ -1.16
PDGFC-205ENST00000506880 GANABQ14697 944 aaKnown RBP7.81□□□□□ -1.16
PDGFC-205ENST00000506880 OR1C1Q15619 314 aa7.81□□□□□ -1.16
PDGFC-205ENST00000506880 SPDYE7PQ495Y7 208 aa7.81□□□□□ -1.16
PDGFC-205ENST00000506880 TRMT12Q53H54 448 aaKnown RBP7.81□□□□□ -1.16
PDGFC-205ENST00000506880 FAM69BQ5VUD6 431 aa7.81□□□□□ -1.16
PDGFC-205ENST00000506880 OR4F3Q6IEY1 312 aa7.81□□□□□ -1.16
PDGFC-205ENST00000506880 SLC25A25Q6KCM7 469 aa7.81□□□□□ -1.16
PDGFC-205ENST00000506880 C19orf48Q6RUI8 117 aa7.81□□□□□ -1.16
PDGFC-205ENST00000506880 TMEM107Q6UX40 140 aa7.81□□□□□ -1.16
PDGFC-205ENST00000506880 HACD2Q6Y1H2 254 aa7.81□□□□□ -1.16
PDGFC-205ENST00000506880 ZNF551Q7Z340 670 aaPredicted RBP7.81□□□□□ -1.16
PDGFC-205ENST00000506880 CMIPQ8IY22 773 aa7.81□□□□□ -1.16
PDGFC-205ENST00000506880 BEST3Q8N1M1 668 aa7.81□□□□□ -1.16
PDGFC-205ENST00000506880 SIRT6Q8N6T7 355 aa7.81□□□□□ -1.16
PDGFC-205ENST00000506880 BCORP1Q8N888 145 aa7.81□□□□□ -1.16
PDGFC-205ENST00000506880 EXD3Q8N9H8 876 aa7.81□□□□□ -1.16
PDGFC-205ENST00000506880 OR4A15Q8NGL6 344 aa7.81□□□□□ -1.16
PDGFC-205ENST00000506880 CLHC1Q8NHS4 586 aa7.81□□□□□ -1.16
PDGFC-205ENST00000506880 FAM110BQ8TC76 370 aa7.81□□□□□ -1.16
PDGFC-205ENST00000506880 ADAMTS15Q8TE58 950 aa7.81□□□□□ -1.16
PDGFC-205ENST00000506880 GTF2H4Q92759 462 aa7.81□□□□□ -1.16
PDGFC-205ENST00000506880 GFM2Q969S9 779 aaKnown RBP7.81□□□□□ -1.16
PDGFC-205ENST00000506880 PPWD1Q96BP3 646 aaKnown RBP7.81□□□□□ -1.16
PDGFC-205ENST00000506880 GIMAP5Q96F15 307 aa7.81□□□□□ -1.16
PDGFC-205ENST00000506880 PPP1R36Q96LQ0 422 aa7.81□□□□□ -1.16
PDGFC-205ENST00000506880 COL21A1Q96P44 957 aa7.81□□□□□ -1.16
PDGFC-205ENST00000506880 FAM173AQ9BQD7 235 aa7.81□□□□□ -1.16
PDGFC-205ENST00000506880 SAR1AQ9NR31 198 aa7.81□□□□□ -1.16
PDGFC-205ENST00000506880 GPATCH2Q9NW75 528 aa7.81□□□□□ -1.16
PDGFC-205ENST00000506880 SUCOQ9UBS9 1254 aaKnown RBP7.81□□□□□ -1.16
PDGFC-205ENST00000506880 CBLCQ9ULV8 474 aa7.81□□□□□ -1.16
PDGFC-205ENST00000506880 BOKQ9UMX3 212 aaPredicted RBP7.81□□□□□ -1.16
PDGFC-205ENST00000506880 ERVK-11Q9UQG0 969 aa7.81□□□□□ -1.16
PDGFC-205ENST00000506880 OR10H1Q9Y4A9 318 aa7.81□□□□□ -1.16
PDGFC-205ENST00000506880 PCDHGA10Q9Y5H3 936 aa7.81□□□□□ -1.16
PDGFC-205ENST00000506880 ZGRF1Q86YA3 2104 aa7.81□□□□□ -1.16
PDGFC-205ENST00000506880 NBASA2RRP1 2371 aa7.8□□□□□ -1.16
PDGFC-205ENST00000506880 RNF103-CHMP3A0A140T963 221 aa7.8□□□□□ -1.16
PDGFC-205ENST00000506880 OR2W5A6NFC9 320 aa7.8□□□□□ -1.16
PDGFC-205ENST00000506880 A8MUI8 341 aa7.8□□□□□ -1.16
PDGFC-205ENST00000506880 H3BNH8 94 aa7.8□□□□□ -1.16
PDGFC-205ENST00000506880 ACOT7O00154 380 aa7.8□□□□□ -1.16
PDGFC-205ENST00000506880 SNPHO15079 494 aa7.8□□□□□ -1.16
PDGFC-205ENST00000506880 TSPAN2O60636 221 aa7.8□□□□□ -1.16
PDGFC-205ENST00000506880 NEURL1O76050 574 aa7.8□□□□□ -1.16
PDGFC-205ENST00000506880 NADKO95544 446 aaPredicted RBP7.8□□□□□ -1.16
PDGFC-205ENST00000506880 ANP32DO95626 131 aa7.8□□□□□ -1.16
PDGFC-205ENST00000506880 C6orf47O95873 294 aa7.8□□□□□ -1.16
PDGFC-205ENST00000506880 P04436 131 aa7.8□□□□□ -1.16
PDGFC-205ENST00000506880 HMGN2P05204 90 aaKnown RBP7.8□□□□□ -1.16
PDGFC-205ENST00000506880 FKBP2P26885 142 aaKnown RBP7.8□□□□□ -1.16
PDGFC-205ENST00000506880 PTPN6P29350 595 aa7.8□□□□□ -1.16
PDGFC-205ENST00000506880 IL12AP29459 219 aa7.8□□□□□ -1.16
PDGFC-205ENST00000506880 IL12BP29460 328 aa7.8□□□□□ -1.16
PDGFC-205ENST00000506880 CHI3L1P36222 383 aaPredicted RBP7.8□□□□□ -1.16
PDGFC-205ENST00000506880 CD96P40200 585 aa7.8□□□□□ -1.16
PDGFC-205ENST00000506880 ZFP36L2P47974 494 aaKnown RBP7.8□□□□□ -1.16
PDGFC-205ENST00000506880 MAN2A2P49641 1150 aa7.8□□□□□ -1.16
PDGFC-205ENST00000506880 NR0B1P51843 470 aaKnown RBP7.8□□□□□ -1.16
PDGFC-205ENST00000506880 SUMO3P55854 103 aaPredicted RBP7.8□□□□□ -1.16
PDGFC-205ENST00000506880 POU6F2P78424 691 aaPredicted RBP7.8□□□□□ -1.16
PDGFC-205ENST00000506880 PLCXD2Q0VAA5 305 aa7.8□□□□□ -1.16
PDGFC-205ENST00000506880 ZNF155Q12901 538 aaPredicted RBP7.8□□□□□ -1.16
PDGFC-205ENST00000506880 ESPL1Q14674 2120 aa7.8□□□□□ -1.16
PDGFC-205ENST00000506880 ARHGAP11BQ3KRB8 267 aa7.8□□□□□ -1.16
PDGFC-205ENST00000506880 GLYR1Q49A26 553 aaPredicted RBP7.8□□□□□ -1.16
PDGFC-205ENST00000506880 AGKQ53H12 422 aa7.8□□□□□ -1.16
PDGFC-205ENST00000506880 ZNF766Q5HY98 468 aa7.8□□□□□ -1.16
PDGFC-205ENST00000506880 SLC6A19Q695T7 634 aa7.8□□□□□ -1.16
PDGFC-205ENST00000506880 HEPHL1Q6MZM0 1159 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms