RNA–Protein interactions for RNA: ENST00000506873.5

KLHL3-208, Transcript of kelch like family member 3, human

TSL 2

Gene KLHL3, Length 1,883 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KLHL3-208	ENST00000506873	TREX2	Q9BQ50	279 aa	Predicted RBP	13.65	□□□□□ -0.22
KLHL3-208	ENST00000506873	NRSN2	Q9GZP1	204 aa		13.65	□□□□□ -0.22
KLHL3-208	ENST00000506873	DUSP22	Q9NRW4	184 aa		13.65	□□□□□ -0.22
KLHL3-208	ENST00000506873	DCAF13	Q9NV06	445 aa	Known RBP	13.65	□□□□□ -0.22
KLHL3-208	ENST00000506873	P2RX2	Q9UBL9	471 aa		13.65	□□□□□ -0.22
KLHL3-208	ENST00000506873	C19orf25	Q9UFG5	118 aa	Predicted RBP	13.65	□□□□□ -0.22
KLHL3-208	ENST00000506873	PADI2	Q9Y2J8	665 aa		13.65	□□□□□ -0.22
KLHL3-208	ENST00000506873	AK5	Q9Y6K8	562 aa		13.65	□□□□□ -0.22
KLHL3-208	ENST00000506873	PTPRB	P23467	1997 aa		13.64	□□□□□ -0.23
KLHL3-208	ENST00000506873	LOC102723996	A0A087X1L8	192 aa		13.64	□□□□□ -0.23
KLHL3-208	ENST00000506873	TCRBV3S1	A0A5B6	114 aa		13.64	□□□□□ -0.23
KLHL3-208	ENST00000506873	GXYLT2	A0PJZ3	443 aa		13.64	□□□□□ -0.23
KLHL3-208	ENST00000506873	TRABD2B	A6NFA1	517 aa		13.64	□□□□□ -0.23
KLHL3-208	ENST00000506873	SAGE2P	A6NJ88	616 aa		13.64	□□□□□ -0.23
KLHL3-208	ENST00000506873	AQP12B	A6NM10	295 aa		13.64	□□□□□ -0.23
KLHL3-208	ENST00000506873	IQCJ-SCHIP1	C9J366	451 aa	Predicted RBP	13.64	□□□□□ -0.23
KLHL3-208	ENST00000506873	C5orf58	C9J3I9	102 aa		13.64	□□□□□ -0.23
KLHL3-208	ENST00000506873	NKX2-2	O95096	273 aa		13.64	□□□□□ -0.23
KLHL3-208	ENST00000506873	H6PD	O95479	791 aa		13.64	□□□□□ -0.23
KLHL3-208	ENST00000506873	SERPINA1	P01009	418 aa		13.64	□□□□□ -0.23
KLHL3-208	ENST00000506873	CHRM4	P08173	479 aa		13.64	□□□□□ -0.23
KLHL3-208	ENST00000506873	CLCN2	P51788	898 aa		13.64	□□□□□ -0.23
KLHL3-208	ENST00000506873	PCBP3	P57721	371 aa	Known RBP	13.64	□□□□□ -0.23
KLHL3-208	ENST00000506873	NNAT	Q16517	81 aa		13.64	□□□□□ -0.23
KLHL3-208	ENST00000506873	GPAT3	Q53EU6	434 aa		13.64	□□□□□ -0.23
KLHL3-208	ENST00000506873	LRRC23	Q53EV4	343 aa	Predicted RBP	13.64	□□□□□ -0.23
KLHL3-208	ENST00000506873	CCNJ	Q5T5M9	372 aa		13.64	□□□□□ -0.23
KLHL3-208	ENST00000506873	ATAD3B	Q5T9A4	648 aa		13.64	□□□□□ -0.23
KLHL3-208	ENST00000506873	IGF2-AS	Q6U949	168 aa		13.64	□□□□□ -0.23
KLHL3-208	ENST00000506873	NPSR1	Q6W5P4	371 aa		13.64	□□□□□ -0.23
KLHL3-208	ENST00000506873	AQP12A	Q8IXF9	295 aa		13.64	□□□□□ -0.23
KLHL3-208	ENST00000506873	IL22RA1	Q8N6P7	574 aa		13.64	□□□□□ -0.23
KLHL3-208	ENST00000506873	FAM86B1	Q8N7N1	296 aa		13.64	□□□□□ -0.23
KLHL3-208	ENST00000506873	ZSCAN1	Q8NBB4	408 aa		13.64	□□□□□ -0.23
KLHL3-208	ENST00000506873	ART5	Q96L15	291 aa		13.64	□□□□□ -0.23
KLHL3-208	ENST00000506873	STAC	Q99469	402 aa		13.64	□□□□□ -0.23
KLHL3-208	ENST00000506873	LMF2	Q9BU23	707 aa	Known RBP	13.64	□□□□□ -0.23
KLHL3-208	ENST00000506873	RSPO3	Q9BXY4	272 aa	Predicted RBP	13.64	□□□□□ -0.23
KLHL3-208	ENST00000506873	GPR87	Q9BY21	358 aa		13.64	□□□□□ -0.23
KLHL3-208	ENST00000506873	ITPA	Q9BY32	194 aa		13.64	□□□□□ -0.23
KLHL3-208	ENST00000506873	EXD2	Q9NVH0	621 aa		13.64	□□□□□ -0.23
KLHL3-208	ENST00000506873	FBXO34	Q9NWN3	711 aa		13.64	□□□□□ -0.23
KLHL3-208	ENST00000506873	GIN1	Q9NXP7	522 aa		13.64	□□□□□ -0.23
KLHL3-208	ENST00000506873	COPS7A	Q9UBW8	275 aa		13.64	□□□□□ -0.23
KLHL3-208	ENST00000506873	GPR55	Q9Y2T6	319 aa	Predicted RBP	13.64	□□□□□ -0.23
KLHL3-208	ENST00000506873	MRPS18B	Q9Y676	258 aa	Known RBP	13.64	□□□□□ -0.23
KLHL3-208	ENST00000506873		V9GYQ6	96 aa		13.64	□□□□□ -0.23
KLHL3-208	ENST00000506873	TMEM247	A6NEH6	219 aa		13.63	□□□□□ -0.23
KLHL3-208	ENST00000506873	C21orf140	B9A014	251 aa		13.63	□□□□□ -0.23
KLHL3-208	ENST00000506873	KRT36	O76013	467 aa		13.63	□□□□□ -0.23
KLHL3-208	ENST00000506873	ATP6V1G2	O95670	118 aa		13.63	□□□□□ -0.23
KLHL3-208	ENST00000506873	SPINK2	P20155	84 aa		13.63	□□□□□ -0.23
KLHL3-208	ENST00000506873	TXNL4A	P83876	142 aa	Known RBP	13.63	□□□□□ -0.23
KLHL3-208	ENST00000506873	SSPN	Q14714	243 aa		13.63	□□□□□ -0.23
KLHL3-208	ENST00000506873	RTP5	Q14D33	572 aa		13.63	□□□□□ -0.23
KLHL3-208	ENST00000506873	ZNHIT3	Q15649	155 aa	Predicted RBP	13.63	□□□□□ -0.23
KLHL3-208	ENST00000506873	CCDC80	Q76M96	950 aa		13.63	□□□□□ -0.23
KLHL3-208	ENST00000506873	C16orf62	Q7Z3J2	963 aa		13.63	□□□□□ -0.23
KLHL3-208	ENST00000506873	C9orf40	Q8IXQ3	194 aa		13.63	□□□□□ -0.23
KLHL3-208	ENST00000506873	COX18	Q8N8Q8	333 aa		13.63	□□□□□ -0.23
KLHL3-208	ENST00000506873	OR11G2	Q8NGC1	345 aa		13.63	□□□□□ -0.23
KLHL3-208	ENST00000506873	OR52E4	Q8NGH9	312 aa		13.63	□□□□□ -0.23
KLHL3-208	ENST00000506873	FAM110B	Q8TC76	370 aa		13.63	□□□□□ -0.23
KLHL3-208	ENST00000506873	TRNT1	Q96Q11	434 aa	Known RBP	13.63	□□□□□ -0.23
KLHL3-208	ENST00000506873	SDF2	Q99470	211 aa		13.63	□□□□□ -0.23
KLHL3-208	ENST00000506873	LIN28A	Q9H9Z2	209 aa	Known RBP	13.63	□□□□□ -0.23
KLHL3-208	ENST00000506873	PRODH2	Q9UF12	536 aa		13.63	□□□□□ -0.23
KLHL3-208	ENST00000506873	IL17B	Q9UHF5	180 aa		13.63	□□□□□ -0.23
KLHL3-208	ENST00000506873	ZNF223	Q9UK11	482 aa	Predicted RBP	13.63	□□□□□ -0.23
KLHL3-208	ENST00000506873	PPIE	Q9UNP9	301 aa	Known RBP	13.63	□□□□□ -0.23
KLHL3-208	ENST00000506873	LIPT1	Q9Y234	373 aa		13.63	□□□□□ -0.23
KLHL3-208	ENST00000506873	PCDHGB3	Q9Y5G1	929 aa		13.63	□□□□□ -0.23
KLHL3-208	ENST00000506873	DMXL2	Q8TDJ6	3036 aa		13.63	□□□□□ -0.23
KLHL3-208	ENST00000506873	IGHV1-45	A0A0A0MS14	117 aa		13.63	□□□□□ -0.23
KLHL3-208	ENST00000506873	CDC14C	A4D256	554 aa		13.63	□□□□□ -0.23
KLHL3-208	ENST00000506873	TMEM229A	B2RXF0	380 aa		13.63	□□□□□ -0.23
KLHL3-208	ENST00000506873	SOCS6	O14544	535 aa		13.63	□□□□□ -0.23
KLHL3-208	ENST00000506873	DXO	O77932	396 aa	Known RBP	13.63	□□□□□ -0.23
KLHL3-208	ENST00000506873	PRKD3	O94806	890 aa		13.63	□□□□□ -0.23
KLHL3-208	ENST00000506873	ZIC2	O95409	532 aa	Predicted RBP	13.63	□□□□□ -0.23
KLHL3-208	ENST00000506873	AGR2	O95994	175 aa		13.63	□□□□□ -0.23
KLHL3-208	ENST00000506873	OPN1SW	P03999	348 aa		13.63	□□□□□ -0.23
KLHL3-208	ENST00000506873	C8B	P07358	591 aa		13.63	□□□□□ -0.23
KLHL3-208	ENST00000506873	CD82	P27701	267 aa		13.63	□□□□□ -0.23
KLHL3-208	ENST00000506873	OTX2	P32243	289 aa		13.63	□□□□□ -0.23
KLHL3-208	ENST00000506873	CRISP3	P54108	245 aa		13.63	□□□□□ -0.23
KLHL3-208	ENST00000506873	CHRNE	Q04844	493 aa		13.63	□□□□□ -0.23
KLHL3-208	ENST00000506873	FOXC1	Q12948	553 aa		13.63	□□□□□ -0.23
KLHL3-208	ENST00000506873	PCOLCE	Q15113	449 aa		13.63	□□□□□ -0.23
KLHL3-208	ENST00000506873	ARHGAP11B	Q3KRB8	267 aa		13.63	□□□□□ -0.23
KLHL3-208	ENST00000506873	CRB2	Q5IJ48	1285 aa		13.63	□□□□□ -0.23
KLHL3-208	ENST00000506873	INTS11	Q5TA45	600 aa	Known RBP	13.63	□□□□□ -0.23
KLHL3-208	ENST00000506873	FIGNL1	Q6PIW4	674 aa		13.63	□□□□□ -0.23
KLHL3-208	ENST00000506873	ENPP6	Q6UWR7	440 aa		13.63	□□□□□ -0.23
KLHL3-208	ENST00000506873	HMGN2P46	Q86SG4	172 aa		13.63	□□□□□ -0.23
KLHL3-208	ENST00000506873	STMN2	Q93045	179 aa		13.63	□□□□□ -0.23
KLHL3-208	ENST00000506873	ADIPOR1	Q96A54	375 aa		13.63	□□□□□ -0.23
KLHL3-208	ENST00000506873	SLCO4A1	Q96BD0	722 aa		13.63	□□□□□ -0.23
KLHL3-208	ENST00000506873	SEPHS2	Q99611	448 aa		13.63	□□□□□ -0.23
KLHL3-208	ENST00000506873	TRIM15	Q9C019	465 aa		13.63	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms