RNA–Protein interactions for RNA: ENST00000506690.1

SQSTM1-211, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-211ENST00000506690 IKBIPQ70UQ0 350 aa16.1■□□□□ 0.17
SQSTM1-211ENST00000506690 PIAS4Q8N2W9 510 aaPredicted RBP16.1■□□□□ 0.17
SQSTM1-211ENST00000506690 ST8SIA4Q92187 359 aa16.1■□□□□ 0.17
SQSTM1-211ENST00000506690 RBCK1Q9BYM8 510 aa16.1■□□□□ 0.17
SQSTM1-211ENST00000506690 SAP130Q9H0E3 1048 aa16.1■□□□□ 0.17
SQSTM1-211ENST00000506690 EGLN3Q9H6Z9 239 aa16.1■□□□□ 0.17
SQSTM1-211ENST00000506690 DMRT3Q9NQL9 472 aa16.1■□□□□ 0.17
SQSTM1-211ENST00000506690 ZC4H2Q9NQZ6 224 aa16.1■□□□□ 0.17
SQSTM1-211ENST00000506690 MTX2O75431 263 aa16.1■□□□□ 0.17
SQSTM1-211ENST00000506690 ZNF821O75541 412 aaPredicted RBP16.1■□□□□ 0.17
SQSTM1-211ENST00000506690 NPR2P20594 1047 aa16.1■□□□□ 0.17
SQSTM1-211ENST00000506690 SERPINA4P29622 427 aa16.1■□□□□ 0.17
SQSTM1-211ENST00000506690 ACSL1P33121 698 aa16.1■□□□□ 0.17
SQSTM1-211ENST00000506690 RAG2P55895 527 aa16.1■□□□□ 0.17
SQSTM1-211ENST00000506690 RAB8AP61006 207 aa16.1■□□□□ 0.17
SQSTM1-211ENST00000506690 CRYZQ08257 329 aaKnown RBP16.1■□□□□ 0.17
SQSTM1-211ENST00000506690 SLC27A4Q6P1M0 643 aa16.1■□□□□ 0.17
SQSTM1-211ENST00000506690 LYPD4Q6UWN0 246 aa16.1■□□□□ 0.17
SQSTM1-211ENST00000506690 TECPR1Q7Z6L1 1165 aa16.1■□□□□ 0.17
SQSTM1-211ENST00000506690 TMPRSS11BQ86T26 416 aa16.1■□□□□ 0.17
SQSTM1-211ENST00000506690 COMTD1Q86VU5 262 aa16.1■□□□□ 0.17
SQSTM1-211ENST00000506690 APCDD1Q8J025 514 aa16.1■□□□□ 0.17
SQSTM1-211ENST00000506690 OR4F15Q8NGB8 312 aa16.1■□□□□ 0.17
SQSTM1-211ENST00000506690 FOXJ1Q92949 421 aa16.1■□□□□ 0.17
SQSTM1-211ENST00000506690 KCTD12Q96CX2 325 aaKnown RBP16.1■□□□□ 0.17
SQSTM1-211ENST00000506690 SECISBP2Q96T21 854 aaKnown RBP16.1■□□□□ 0.17
SQSTM1-211ENST00000506690 LINC00597Q9H2U6 94 aa16.1■□□□□ 0.17
SQSTM1-211ENST00000506690 OR51B5Q9H339 312 aa16.1■□□□□ 0.17
SQSTM1-211ENST00000506690 CDCP1Q9H5V8 836 aa16.1■□□□□ 0.17
SQSTM1-211ENST00000506690 COPZ2Q9P299 210 aa16.1■□□□□ 0.17
SQSTM1-211ENST00000506690 ANHXE9PGG2 379 aa16.09■□□□□ 0.17
SQSTM1-211ENST00000506690 M0R233 179 aa16.09■□□□□ 0.17
SQSTM1-211ENST00000506690 TGFB1P01137 390 aa16.09■□□□□ 0.17
SQSTM1-211ENST00000506690 RPLP2P05387 115 aaKnown RBP16.09■□□□□ 0.17
SQSTM1-211ENST00000506690 IL3P08700 152 aa16.09■□□□□ 0.17
SQSTM1-211ENST00000506690 PEPDP12955 493 aa16.09■□□□□ 0.17
SQSTM1-211ENST00000506690 SREBF2Q12772 1141 aa16.09■□□□□ 0.17
SQSTM1-211ENST00000506690 FZD5Q13467 585 aa16.09■□□□□ 0.17
SQSTM1-211ENST00000506690 TUSC1Q2TAM9 212 aa16.09■□□□□ 0.17
SQSTM1-211ENST00000506690 RETSATQ6NUM9 610 aa16.09■□□□□ 0.17
SQSTM1-211ENST00000506690 BHLHB9Q6PI77 547 aa16.09■□□□□ 0.17
SQSTM1-211ENST00000506690 IL20RBQ6UXL0 311 aa16.09■□□□□ 0.17
SQSTM1-211ENST00000506690 FGD2Q7Z6J4 655 aa16.09■□□□□ 0.17
SQSTM1-211ENST00000506690 MMP21Q8N119 569 aa16.09■□□□□ 0.17
SQSTM1-211ENST00000506690 KLHL36Q8N4N3 616 aa16.09■□□□□ 0.17
SQSTM1-211ENST00000506690 OR52N1Q8NH53 320 aa16.09■□□□□ 0.17
SQSTM1-211ENST00000506690 RAB8BQ92930 207 aa16.09■□□□□ 0.17
SQSTM1-211ENST00000506690 RIT1Q92963 219 aa16.09■□□□□ 0.17
SQSTM1-211ENST00000506690 SEC14L3Q9UDX4 400 aa16.09■□□□□ 0.17
SQSTM1-211ENST00000506690 ABT1Q9ULW3 272 aaKnown RBP16.09■□□□□ 0.17
SQSTM1-211ENST00000506690 MFSD2BA6NFX1 497 aa16.09■□□□□ 0.17
SQSTM1-211ENST00000506690 ANKDD1BA6NHY2 528 aa16.09■□□□□ 0.17
SQSTM1-211ENST00000506690 NPC1O15118 1278 aa16.09■□□□□ 0.17
SQSTM1-211ENST00000506690 DUSP11O75319 330 aaKnown RBP16.09■□□□□ 0.17
SQSTM1-211ENST00000506690 SOX30O94993 753 aa16.09■□□□□ 0.17
SQSTM1-211ENST00000506690 KLK1P06870 262 aa16.09■□□□□ 0.17
SQSTM1-211ENST00000506690 GSTM3P21266 225 aa16.09■□□□□ 0.17
SQSTM1-211ENST00000506690 GIFP27352 417 aa16.09■□□□□ 0.17
SQSTM1-211ENST00000506690 EPHA4P54764 986 aa16.09■□□□□ 0.17
SQSTM1-211ENST00000506690 VSX2P58304 361 aaPredicted RBP16.09■□□□□ 0.17
SQSTM1-211ENST00000506690 UAP1L1Q3KQV9 507 aa16.09■□□□□ 0.17
SQSTM1-211ENST00000506690 NHLRC3Q5JS37 347 aa16.09■□□□□ 0.17
SQSTM1-211ENST00000506690 FAM180BQ6P0A1 224 aa16.09■□□□□ 0.17
SQSTM1-211ENST00000506690 CHMP1BQ7LBR1 199 aa16.09■□□□□ 0.17
SQSTM1-211ENST00000506690 SAMD12Q8N8I0 201 aa16.09■□□□□ 0.17
SQSTM1-211ENST00000506690 UXS1Q8NBZ7 420 aa16.09■□□□□ 0.17
SQSTM1-211ENST00000506690 FBXO15Q8NCQ5 510 aaPredicted RBP16.09■□□□□ 0.17
SQSTM1-211ENST00000506690 OR52H1Q8NGJ2 320 aa16.09■□□□□ 0.17
SQSTM1-211ENST00000506690 SPRYD4Q8WW59 207 aaPredicted RBP16.09■□□□□ 0.17
SQSTM1-211ENST00000506690 COQ10AQ96MF6 247 aa16.09■□□□□ 0.17
SQSTM1-211ENST00000506690 FNDC11Q9BVV2 318 aa16.09■□□□□ 0.17
SQSTM1-211ENST00000506690 KLF16Q9BXK1 252 aaPredicted RBP16.09■□□□□ 0.17
SQSTM1-211ENST00000506690 SMG9Q9H0W8 520 aaKnown RBP16.09■□□□□ 0.17
SQSTM1-211ENST00000506690 KIF26AQ9ULI4 1882 aaPredicted RBP16.09■□□□□ 0.17
SQSTM1-211ENST00000506690 ZFR2Q9UPR6 939 aaKnown RBP16.09■□□□□ 0.17
SQSTM1-211ENST00000506690 FRMPD3Q5JV73 1810 aa16.09■□□□□ 0.17
SQSTM1-211ENST00000506690 A0A1B0GVC2 190 aa16.08■□□□□ 0.17
SQSTM1-211ENST00000506690 A0A1W2PRG6 482 aa16.08■□□□□ 0.17
SQSTM1-211ENST00000506690 TMEM202A6NGA9 273 aa16.08■□□□□ 0.17
SQSTM1-211ENST00000506690 A6NIN4 97 aa16.08■□□□□ 0.17
SQSTM1-211ENST00000506690 HMGN4O00479 90 aa16.08■□□□□ 0.17
SQSTM1-211ENST00000506690 ZNF197O14709 1029 aa16.08■□□□□ 0.17
SQSTM1-211ENST00000506690 UBXN7O94888 489 aa16.08■□□□□ 0.17
SQSTM1-211ENST00000506690 IGHA1P01876 353 aa16.08■□□□□ 0.17
SQSTM1-211ENST00000506690 UGT2B7P16662 529 aa16.08■□□□□ 0.17
SQSTM1-211ENST00000506690 CDH11P55287 796 aa16.08■□□□□ 0.17
SQSTM1-211ENST00000506690 ZP1P60852 638 aa16.08■□□□□ 0.17
SQSTM1-211ENST00000506690 ZNF273Q14593 569 aa16.08■□□□□ 0.17
SQSTM1-211ENST00000506690 ZNF791Q3KP31 576 aaPredicted RBP16.08■□□□□ 0.17
SQSTM1-211ENST00000506690 PYHIN1Q6K0P9 492 aa16.08■□□□□ 0.17
SQSTM1-211ENST00000506690 RTN4RL1Q86UN2 441 aaPredicted RBP16.08■□□□□ 0.17
SQSTM1-211ENST00000506690 OR8D4Q8NGM9 314 aa16.08■□□□□ 0.17
SQSTM1-211ENST00000506690 TEX47Q8TBZ9 253 aa16.08■□□□□ 0.17
SQSTM1-211ENST00000506690 OVCA2Q8WZ82 227 aa16.08■□□□□ 0.17
SQSTM1-211ENST00000506690 FBXW5Q969U6 566 aa16.08■□□□□ 0.17
SQSTM1-211ENST00000506690 ERMAPQ96PL5 475 aaPredicted RBP16.08■□□□□ 0.17
SQSTM1-211ENST00000506690 ZNF607Q96SK3 696 aa16.08■□□□□ 0.17
SQSTM1-211ENST00000506690 C2orf49Q9BVC5 232 aaPredicted RBP16.08■□□□□ 0.17
SQSTM1-211ENST00000506690 CACNG6Q9BXT2 260 aa16.08■□□□□ 0.17
SQSTM1-211ENST00000506690 BTBD1Q9H0C5 482 aa16.08■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms