RNA–Protein interactions for RNA: ENST00000506516.5

GYPB-206, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-206ENST00000506516 NADKO95544 446 aaPredicted RBP6.69□□□□□ -1.34
GYPB-206ENST00000506516 LAMP1P11279 417 aa6.69□□□□□ -1.34
GYPB-206ENST00000506516 GNLYP22749 145 aa6.69□□□□□ -1.34
GYPB-206ENST00000506516 ABCD3P28288 659 aa6.69□□□□□ -1.34
GYPB-206ENST00000506516 MC3RP41968 323 aa6.69□□□□□ -1.34
GYPB-206ENST00000506516 FRKP42685 505 aaPredicted RBP6.69□□□□□ -1.34
GYPB-206ENST00000506516 MEOX1P50221 254 aa6.69□□□□□ -1.34
GYPB-206ENST00000506516 CLNS1AP54105 237 aaKnown RBP6.69□□□□□ -1.34
GYPB-206ENST00000506516 PRKAG1P54619 331 aa6.69□□□□□ -1.34
GYPB-206ENST00000506516 DIO3P55073 304 aa6.69□□□□□ -1.34
GYPB-206ENST00000506516 C21orf58P58505 322 aa6.69□□□□□ -1.34
GYPB-206ENST00000506516 GPR85P60893 370 aa6.69□□□□□ -1.34
GYPB-206ENST00000506516 MRPS22P82650 360 aaKnown RBP6.69□□□□□ -1.34
GYPB-206ENST00000506516 PRR5P85299 388 aa6.69□□□□□ -1.34
GYPB-206ENST00000506516 PLGLB1Q02325 96 aa6.69□□□□□ -1.34
GYPB-206ENST00000506516 RBPJQ06330 500 aa6.69□□□□□ -1.34
GYPB-206ENST00000506516 HSPB3Q12988 150 aa6.69□□□□□ -1.34
GYPB-206ENST00000506516 NTRK2Q16620 822 aa6.69□□□□□ -1.34
GYPB-206ENST00000506516 DPY19L1Q2PZI1 675 aa6.69□□□□□ -1.34
GYPB-206ENST00000506516 PGS1Q32NB8 556 aa6.69□□□□□ -1.34
GYPB-206ENST00000506516 VPS26BQ4G0F5 336 aa6.69□□□□□ -1.34
GYPB-206ENST00000506516 ANXA8L1Q5VT79 327 aa6.69□□□□□ -1.34
GYPB-206ENST00000506516 ZNF324BQ6AW86 544 aaPredicted RBP6.69□□□□□ -1.34
GYPB-206ENST00000506516 NXNQ6DKJ4 435 aa6.69□□□□□ -1.34
GYPB-206ENST00000506516 OGFOD2Q6N063 350 aa6.69□□□□□ -1.34
GYPB-206ENST00000506516 ZCCHC12Q6PEW1 402 aa6.69□□□□□ -1.34
GYPB-206ENST00000506516 PAOXQ6QHF9 649 aa6.69□□□□□ -1.34
GYPB-206ENST00000506516 BNC2Q6ZN30 1099 aaPredicted RBP6.69□□□□□ -1.34
GYPB-206ENST00000506516 GK5Q6ZS86 529 aa6.69□□□□□ -1.34
GYPB-206ENST00000506516 FAM47EQ6ZV65 393 aa6.69□□□□□ -1.34
GYPB-206ENST00000506516 ACAD11Q709F0 780 aa6.69□□□□□ -1.34
GYPB-206ENST00000506516 ZNF551Q7Z340 670 aaPredicted RBP6.69□□□□□ -1.34
GYPB-206ENST00000506516 RIMKLAQ8IXN7 391 aa6.69□□□□□ -1.34
GYPB-206ENST00000506516 OR2L13Q8N349 312 aa6.69□□□□□ -1.34
GYPB-206ENST00000506516 CPSF7Q8N684 471 aaKnown RBP6.69□□□□□ -1.34
GYPB-206ENST00000506516 SIMC1Q8NDZ2 872 aa6.69□□□□□ -1.34
GYPB-206ENST00000506516 NUP43Q8NFH3 380 aa6.69□□□□□ -1.34
GYPB-206ENST00000506516 OR7G2Q8NG99 324 aa6.69□□□□□ -1.34
GYPB-206ENST00000506516 OR7A2PQ8NGA2 310 aa6.69□□□□□ -1.34
GYPB-206ENST00000506516 OR5M3Q8NGP4 307 aa6.69□□□□□ -1.34
GYPB-206ENST00000506516 ACTRT2Q8TDY3 377 aa6.69□□□□□ -1.34
GYPB-206ENST00000506516 PAQR8Q8TEZ7 354 aa6.69□□□□□ -1.34
GYPB-206ENST00000506516 CKAP2Q8WWK9 683 aa6.69□□□□□ -1.34
GYPB-206ENST00000506516 OR5P2Q8WZ92 322 aa6.69□□□□□ -1.34
GYPB-206ENST00000506516 CIDECQ96AQ7 238 aaPredicted RBP6.69□□□□□ -1.34
GYPB-206ENST00000506516 TMCO6Q96DC7 493 aa6.69□□□□□ -1.34
GYPB-206ENST00000506516 ZBTB18Q99592 522 aa6.69□□□□□ -1.34
GYPB-206ENST00000506516 DUSP26Q9BV47 211 aa6.69□□□□□ -1.34
GYPB-206ENST00000506516 ITPAQ9BY32 194 aa6.69□□□□□ -1.34
GYPB-206ENST00000506516 NXF5Q9H1B4 397 aaKnown RBP6.69□□□□□ -1.34
GYPB-206ENST00000506516 CLMPQ9H6B4 373 aa6.69□□□□□ -1.34
GYPB-206ENST00000506516 WDR55Q9H6Y2 383 aaPredicted RBP6.69□□□□□ -1.34
GYPB-206ENST00000506516 FOLH1BQ9HBA9 442 aa6.69□□□□□ -1.34
GYPB-206ENST00000506516 MED4Q9NPJ6 270 aa6.69□□□□□ -1.34
GYPB-206ENST00000506516 ZNF446Q9NWS9 450 aa6.69□□□□□ -1.34
GYPB-206ENST00000506516 SEC14L3Q9UDX4 400 aa6.69□□□□□ -1.34
GYPB-206ENST00000506516 MRTO4Q9UKD2 239 aaKnown RBP6.69□□□□□ -1.34
GYPB-206ENST00000506516 PCDHGB4Q9UN71 923 aa6.69□□□□□ -1.34
GYPB-206ENST00000506516 GPR55Q9Y2T6 319 aaPredicted RBP6.69□□□□□ -1.34
GYPB-206ENST00000506516 OR10H1Q9Y4A9 318 aa6.69□□□□□ -1.34
GYPB-206ENST00000506516 SCN2AQ99250 2005 aa6.69□□□□□ -1.34
GYPB-206ENST00000506516 CACNA1GO43497 2377 aa6.68□□□□□ -1.34
GYPB-206ENST00000506516 ELOA3CA0A087WX78 387 aaPredicted RBP6.68□□□□□ -1.34
GYPB-206ENST00000506516 GOLGA8QA0A0J9YX86 632 aa6.68□□□□□ -1.34
GYPB-206ENST00000506516 GOLGA8OA6NCC3 632 aa6.68□□□□□ -1.34
GYPB-206ENST00000506516 OR6C70A6NIJ9 312 aa6.68□□□□□ -1.34
GYPB-206ENST00000506516 ELOA3DA6NLF2 546 aaPredicted RBP6.68□□□□□ -1.34
GYPB-206ENST00000506516 NPIPA5E9PKD4 350 aa6.68□□□□□ -1.34
GYPB-206ENST00000506516 GOLGA8NF8WBI6 632 aa6.68□□□□□ -1.34
GYPB-206ENST00000506516 PYCARD-AS1I3L0S3 204 aa6.68□□□□□ -1.34
GYPB-206ENST00000506516 TFECO14948 347 aaPredicted RBP6.68□□□□□ -1.34
GYPB-206ENST00000506516 TO15178 435 aa6.68□□□□□ -1.34
GYPB-206ENST00000506516 EMC8O43402 210 aa6.68□□□□□ -1.34
GYPB-206ENST00000506516 ASNA1O43681 348 aa6.68□□□□□ -1.34
GYPB-206ENST00000506516 DIAPH2O60879 1101 aa6.68□□□□□ -1.34
GYPB-206ENST00000506516 REM1O75628 298 aa6.68□□□□□ -1.34
GYPB-206ENST00000506516 PPM1BO75688 479 aa6.68□□□□□ -1.34
GYPB-206ENST00000506516 SNX4O95219 450 aa6.68□□□□□ -1.34
GYPB-206ENST00000506516 ABCB1P08183 1280 aaPredicted RBP6.68□□□□□ -1.34
GYPB-206ENST00000506516 CT45A8P0DMV1 189 aa6.68□□□□□ -1.34
GYPB-206ENST00000506516 CT45A9P0DMV2 189 aa6.68□□□□□ -1.34
GYPB-206ENST00000506516 IDO1P14902 403 aa6.68□□□□□ -1.34
GYPB-206ENST00000506516 ZNF24P17028 368 aa6.68□□□□□ -1.34
GYPB-206ENST00000506516 MST1P26927 711 aa6.68□□□□□ -1.34
GYPB-206ENST00000506516 EPHA3P29320 983 aa6.68□□□□□ -1.34
GYPB-206ENST00000506516 IL12BP29460 328 aa6.68□□□□□ -1.34
GYPB-206ENST00000506516 S100A3P33764 101 aa6.68□□□□□ -1.34
GYPB-206ENST00000506516 KIR3DL1P43629 444 aa6.68□□□□□ -1.34
GYPB-206ENST00000506516 PRIM2P49643 509 aa6.68□□□□□ -1.34
GYPB-206ENST00000506516 PNLIPRP2P54317 469 aa6.68□□□□□ -1.34
GYPB-206ENST00000506516 PSMD4P55036 377 aaKnown RBP6.68□□□□□ -1.34
GYPB-206ENST00000506516 FBXW4P57775 412 aa6.68□□□□□ -1.34
GYPB-206ENST00000506516 KCNJ2P63252 427 aa6.68□□□□□ -1.34
GYPB-206ENST00000506516 PMP22Q01453 160 aa6.68□□□□□ -1.34
GYPB-206ENST00000506516 PLCXD2Q0VAA5 305 aa6.68□□□□□ -1.34
GYPB-206ENST00000506516 ZNF155Q12901 538 aaPredicted RBP6.68□□□□□ -1.34
GYPB-206ENST00000506516 DUSP8Q13202 625 aa6.68□□□□□ -1.34
GYPB-206ENST00000506516 TP53BP2Q13625 1128 aa6.68□□□□□ -1.34
GYPB-206ENST00000506516 EFR3AQ14156 821 aa6.68□□□□□ -1.34
GYPB-206ENST00000506516 NNATQ16517 81 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms