RNA–Protein interactions for RNA: ENST00000506515.1

HERC4-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-213ENST00000506515 CHPT1Q8WUD6 406 aa4.88□□□□□ -1.63
HERC4-213ENST00000506515 UBE2Q2Q8WVN8 375 aa4.88□□□□□ -1.63
HERC4-213ENST00000506515 C11orf52Q96A22 123 aa4.88□□□□□ -1.63
HERC4-213ENST00000506515 RAB39BQ96DA2 213 aa4.88□□□□□ -1.63
HERC4-213ENST00000506515 PKP2Q99959 881 aa4.88□□□□□ -1.63
HERC4-213ENST00000506515 VGLL1Q99990 258 aa4.88□□□□□ -1.63
HERC4-213ENST00000506515 JPH2Q9BR39 696 aaPredicted RBP4.88□□□□□ -1.63
HERC4-213ENST00000506515 ZNF577Q9BSK1 485 aa4.88□□□□□ -1.63
HERC4-213ENST00000506515 HOXC10Q9NYD6 342 aa4.88□□□□□ -1.63
HERC4-213ENST00000506515 MROH7Q68CQ1 1323 aa4.88□□□□□ -1.63
HERC4-213ENST00000506515 EYSQ5T1H1 3165 aa4.87□□□□□ -1.63
HERC4-213ENST00000506515 ARHGEF33A8MVX0 844 aa4.87□□□□□ -1.63
HERC4-213ENST00000506515 A8MXK9 166 aa4.87□□□□□ -1.63
HERC4-213ENST00000506515 ALPPP05187 535 aa4.87□□□□□ -1.63
HERC4-213ENST00000506515 CCDC192P0DO97 292 aa4.87□□□□□ -1.63
HERC4-213ENST00000506515 ALPPL2P10696 532 aa4.87□□□□□ -1.63
HERC4-213ENST00000506515 CAPGP40121 348 aa4.87□□□□□ -1.63
HERC4-213ENST00000506515 ALDH3B1P43353 468 aa4.87□□□□□ -1.63
HERC4-213ENST00000506515 TNFRSF4P43489 277 aa4.87□□□□□ -1.63
HERC4-213ENST00000506515 ACADSBP45954 432 aa4.87□□□□□ -1.63
HERC4-213ENST00000506515 ELAVL2Q12926 359 aaKnown RBP4.87□□□□□ -1.63
HERC4-213ENST00000506515 RIGQ13278 110 aa4.87□□□□□ -1.63
HERC4-213ENST00000506515 SLC17A1Q14916 467 aa4.87□□□□□ -1.63
HERC4-213ENST00000506515 EXOSC7Q15024 291 aaKnown RBP4.87□□□□□ -1.63
HERC4-213ENST00000506515 LRRC26Q2I0M4 334 aa4.87□□□□□ -1.63
HERC4-213ENST00000506515 CDC42EP5Q6NZY7 148 aa4.87□□□□□ -1.63
HERC4-213ENST00000506515 GSG1LQ6UXU4 331 aa4.87□□□□□ -1.63
HERC4-213ENST00000506515 WDR88Q6ZMY6 472 aa4.87□□□□□ -1.63
HERC4-213ENST00000506515 C1orf186Q6ZWK4 172 aa4.87□□□□□ -1.63
HERC4-213ENST00000506515 MIER3Q7Z3K6 550 aa4.87□□□□□ -1.63
HERC4-213ENST00000506515 ITIH5Q86UX2 942 aa4.87□□□□□ -1.63
HERC4-213ENST00000506515 ZNF619Q8N2I2 560 aa4.87□□□□□ -1.63
HERC4-213ENST00000506515 SSC4DQ8WTU2 575 aa4.87□□□□□ -1.63
HERC4-213ENST00000506515 ZNF689Q96CS4 500 aaPredicted RBP4.87□□□□□ -1.63
HERC4-213ENST00000506515 RUNDC3BQ96NL0 473 aa4.87□□□□□ -1.63
HERC4-213ENST00000506515 ANKRD27Q96NW4 1050 aa4.87□□□□□ -1.63
HERC4-213ENST00000506515 CABLES2Q9BTV7 478 aa4.87□□□□□ -1.63
HERC4-213ENST00000506515 STRADBQ9C0K7 418 aa4.87□□□□□ -1.63
HERC4-213ENST00000506515 SLC25A19Q9HC21 320 aa4.87□□□□□ -1.63
HERC4-213ENST00000506515 KCNN3Q9UGI6 736 aa4.87□□□□□ -1.63
HERC4-213ENST00000506515 DNPEPQ9ULA0 475 aa4.87□□□□□ -1.63
HERC4-213ENST00000506515 TRBV5-4A0A0C4DH59 114 aa4.86□□□□□ -1.63
HERC4-213ENST00000506515 IGLON5A6NGN9 336 aa4.86□□□□□ -1.63
HERC4-213ENST00000506515 CHEK1O14757 476 aa4.86□□□□□ -1.63
HERC4-213ENST00000506515 SEC22BO75396 215 aa4.86□□□□□ -1.63
HERC4-213ENST00000506515 GAS8-AS1O95177 125 aa4.86□□□□□ -1.63
HERC4-213ENST00000506515 SERPINF2P08697 491 aa4.86□□□□□ -1.63
HERC4-213ENST00000506515 MBL2P11226 248 aaPredicted RBP4.86□□□□□ -1.63
HERC4-213ENST00000506515 GAP43P17677 238 aa4.86□□□□□ -1.63
HERC4-213ENST00000506515 FCARP24071 287 aa4.86□□□□□ -1.63
HERC4-213ENST00000506515 SFNP31947 248 aa4.86□□□□□ -1.63
HERC4-213ENST00000506515 NLRP11P59045 1033 aaKnown RBP4.86□□□□□ -1.63
HERC4-213ENST00000506515 TEX35Q5T0J7 233 aa4.86□□□□□ -1.63
HERC4-213ENST00000506515 C1orf189Q5VU69 101 aa4.86□□□□□ -1.63
HERC4-213ENST00000506515 FAAP20Q6NZ36 180 aa4.86□□□□□ -1.63
HERC4-213ENST00000506515 CNSTQ6PJW8 725 aa4.86□□□□□ -1.63
HERC4-213ENST00000506515 BNIPLQ7Z465 357 aa4.86□□□□□ -1.63
HERC4-213ENST00000506515 CARM1Q86X55 608 aa4.86□□□□□ -1.63
HERC4-213ENST00000506515 BANPQ8N9N5 519 aa4.86□□□□□ -1.63
HERC4-213ENST00000506515 ICA1LQ8NDH6 482 aa4.86□□□□□ -1.63
HERC4-213ENST00000506515 NABP1Q96AH0 204 aa4.86□□□□□ -1.63
HERC4-213ENST00000506515 RCHY1Q96PM5 261 aa4.86□□□□□ -1.63
HERC4-213ENST00000506515 TRIM15Q9C019 465 aa4.86□□□□□ -1.63
HERC4-213ENST00000506515 GFRA4Q9GZZ7 299 aa4.86□□□□□ -1.63
HERC4-213ENST00000506515 DEPPQ9NTK1 212 aa4.86□□□□□ -1.63
HERC4-213ENST00000506515 VPS54Q9P1Q0 977 aa4.86□□□□□ -1.63
HERC4-213ENST00000506515 ERVK-18Q9QC07 812 aa4.86□□□□□ -1.63
HERC4-213ENST00000506515 ODF2LQ9ULJ1 636 aa4.86□□□□□ -1.63
HERC4-213ENST00000506515 SALL1Q9NSC2 1324 aa4.86□□□□□ -1.63
HERC4-213ENST00000506515 SPTBN5Q9NRC6 3674 aaKnown RBP4.85□□□□□ -1.63
HERC4-213ENST00000506515 BDP1A6H8Y1 2624 aa4.85□□□□□ -1.63
HERC4-213ENST00000506515 IGLV4-3A0A075B6K6 122 aa4.85□□□□□ -1.63
HERC4-213ENST00000506515 TRGV8A0A0C4DH27 118 aa4.85□□□□□ -1.63
HERC4-213ENST00000506515 KRT87PA6NCN2 255 aa4.85□□□□□ -1.63
HERC4-213ENST00000506515 CFAP73A6NFT4 308 aa4.85□□□□□ -1.63
HERC4-213ENST00000506515 ARHGAP42A6NI28 874 aa4.85□□□□□ -1.63
HERC4-213ENST00000506515 ZNF724A8MTY0 619 aa4.85□□□□□ -1.63
HERC4-213ENST00000506515 E9PQ18 207 aa4.85□□□□□ -1.63
HERC4-213ENST00000506515 NME2P1O60361 137 aa4.85□□□□□ -1.63
HERC4-213ENST00000506515 LRP3O75074 770 aa4.85□□□□□ -1.63
HERC4-213ENST00000506515 DUSP11O75319 330 aaKnown RBP4.85□□□□□ -1.63
HERC4-213ENST00000506515 PGK2P07205 417 aa4.85□□□□□ -1.63
HERC4-213ENST00000506515 ATP4BP51164 291 aa4.85□□□□□ -1.63
HERC4-213ENST00000506515 TKTL1P51854 596 aa4.85□□□□□ -1.63
HERC4-213ENST00000506515 STARD6P59095 220 aa4.85□□□□□ -1.63
HERC4-213ENST00000506515 SRPXP78539 464 aa4.85□□□□□ -1.63
HERC4-213ENST00000506515 FCN2Q15485 313 aa4.85□□□□□ -1.63
HERC4-213ENST00000506515 CCDC40Q4G0X9 1142 aa4.85□□□□□ -1.63
HERC4-213ENST00000506515 HIST2H2AA3Q6FI13 130 aa4.85□□□□□ -1.63
HERC4-213ENST00000506515 OR6B2Q6IFH4 312 aa4.85□□□□□ -1.63
HERC4-213ENST00000506515 MFSD7Q6UXD7 560 aa4.85□□□□□ -1.63
HERC4-213ENST00000506515 CDHR3Q6ZTQ4 885 aa4.85□□□□□ -1.63
HERC4-213ENST00000506515 GPR142Q7Z601 462 aa4.85□□□□□ -1.63
HERC4-213ENST00000506515 TAF8Q7Z7C8 310 aa4.85□□□□□ -1.63
HERC4-213ENST00000506515 RNF130Q86XS8 419 aa4.85□□□□□ -1.63
HERC4-213ENST00000506515 GVQW1Q8N7I0 195 aa4.85□□□□□ -1.63
HERC4-213ENST00000506515 NPRL2Q8WTW4 380 aa4.85□□□□□ -1.63
HERC4-213ENST00000506515 BADQ92934 168 aa4.85□□□□□ -1.63
HERC4-213ENST00000506515 ZNF597Q96LX8 424 aa4.85□□□□□ -1.63
HERC4-213ENST00000506515 NSMCE2Q96MF7 247 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms