RNA–Protein interactions for RNA: ENST00000506055.5

PPARGC1A-204, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 1 (best)

Gene PPARGC1A, Length 2,627 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-204ENST00000506055 SEMA4GQ9NTN9 838 aa7.16□□□□□ -1.26
PPARGC1A-204ENST00000506055 COMMD3Q9UBI1 195 aa7.16□□□□□ -1.26
PPARGC1A-204ENST00000506055 SERGEFQ9UGK8 458 aa7.16□□□□□ -1.26
PPARGC1A-204ENST00000506055 ENTPD4Q9Y227 616 aa7.16□□□□□ -1.26
PPARGC1A-204ENST00000506055 GPSM3Q9Y4H4 160 aa7.16□□□□□ -1.26
PPARGC1A-204ENST00000506055 ASB4Q9Y574 426 aa7.16□□□□□ -1.26
PPARGC1A-204ENST00000506055 N6AMT1Q9Y5N5 214 aa7.16□□□□□ -1.26
PPARGC1A-204ENST00000506055 COL4A3Q01955 1670 aa7.16□□□□□ -1.26
PPARGC1A-204ENST00000506055 KIF26AQ9ULI4 1882 aaPredicted RBP7.16□□□□□ -1.26
PPARGC1A-204ENST00000506055 A0A1W2PP55 124 aa7.15□□□□□ -1.26
PPARGC1A-204ENST00000506055 SNTNA6NMZ2 147 aa7.15□□□□□ -1.26
PPARGC1A-204ENST00000506055 SLC30A4O14863 429 aa7.15□□□□□ -1.26
PPARGC1A-204ENST00000506055 PRODHO43272 600 aa7.15□□□□□ -1.26
PPARGC1A-204ENST00000506055 FCMRO60667 390 aa7.15□□□□□ -1.26
PPARGC1A-204ENST00000506055 EIF2S1P05198 315 aaKnown RBP7.15□□□□□ -1.26
PPARGC1A-204ENST00000506055 CCNYL3P0C7X3 344 aa7.15□□□□□ -1.26
PPARGC1A-204ENST00000506055 ATP5A1P25705 553 aaKnown RBP7.15□□□□□ -1.26
PPARGC1A-204ENST00000506055 TRHRP34981 398 aaPredicted RBP7.15□□□□□ -1.26
PPARGC1A-204ENST00000506055 ATP6V1E1P36543 226 aa7.15□□□□□ -1.26
PPARGC1A-204ENST00000506055 ANXA11P50995 505 aaKnown RBP7.15□□□□□ -1.26
PPARGC1A-204ENST00000506055 FABP5Q01469 135 aa7.15□□□□□ -1.26
PPARGC1A-204ENST00000506055 HYAL2Q12891 473 aa7.15□□□□□ -1.26
PPARGC1A-204ENST00000506055 IRF4Q15306 451 aa7.15□□□□□ -1.26
PPARGC1A-204ENST00000506055 PLK5Q496M5 336 aa7.15□□□□□ -1.26
PPARGC1A-204ENST00000506055 TMEM35AQ53FP2 167 aa7.15□□□□□ -1.26
PPARGC1A-204ENST00000506055 C3orf38Q5JPI3 329 aa7.15□□□□□ -1.26
PPARGC1A-204ENST00000506055 DDI2Q5TDH0 399 aa7.15□□□□□ -1.26
PPARGC1A-204ENST00000506055 ABHD17CQ6PCB6 329 aa7.15□□□□□ -1.26
PPARGC1A-204ENST00000506055 SLC36A4Q6YBV0 504 aa7.15□□□□□ -1.26
PPARGC1A-204ENST00000506055 DGLUCYQ7Z3D6 616 aa7.15□□□□□ -1.26
PPARGC1A-204ENST00000506055 C16orf62Q7Z3J2 963 aa7.15□□□□□ -1.26
PPARGC1A-204ENST00000506055 FBXL6Q8N531 539 aa7.15□□□□□ -1.26
PPARGC1A-204ENST00000506055 CLDN22Q8N7P3 220 aa7.15□□□□□ -1.26
PPARGC1A-204ENST00000506055 NUP43Q8NFH3 380 aa7.15□□□□□ -1.26
PPARGC1A-204ENST00000506055 OR52E1Q8NGJ3 308 aa7.15□□□□□ -1.26
PPARGC1A-204ENST00000506055 OR52P1PQ8NH57 321 aa7.15□□□□□ -1.26
PPARGC1A-204ENST00000506055 ASB16Q96NS5 453 aa7.15□□□□□ -1.26
PPARGC1A-204ENST00000506055 SLC38A2Q96QD8 506 aa7.15□□□□□ -1.26
PPARGC1A-204ENST00000506055 OR7D2Q96RA2 312 aa7.15□□□□□ -1.26
PPARGC1A-204ENST00000506055 PHOX2BQ99453 314 aa7.15□□□□□ -1.26
PPARGC1A-204ENST00000506055 KATNB1Q9BVA0 655 aa7.15□□□□□ -1.26
PPARGC1A-204ENST00000506055 TMED9Q9BVK6 235 aa7.15□□□□□ -1.26
PPARGC1A-204ENST00000506055 PINK1Q9BXM7 581 aa7.15□□□□□ -1.26
PPARGC1A-204ENST00000506055 HDHD5Q9BXW7 423 aa7.15□□□□□ -1.26
PPARGC1A-204ENST00000506055 TEX101Q9BY14 249 aa7.15□□□□□ -1.26
PPARGC1A-204ENST00000506055 C6orf106Q9H6K1 298 aaPredicted RBP7.15□□□□□ -1.26
PPARGC1A-204ENST00000506055 TBC1D17Q9HA65 648 aa7.15□□□□□ -1.26
PPARGC1A-204ENST00000506055 SPHK1Q9NYA1 384 aa7.15□□□□□ -1.26
PPARGC1A-204ENST00000506055 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.15□□□□□ -1.26
PPARGC1A-204ENST00000506055 NUMA1Q14980 2115 aa7.15□□□□□ -1.26
PPARGC1A-204ENST00000506055 NUP210Q8TEM1 1887 aaPredicted RBP7.15□□□□□ -1.26
PPARGC1A-204ENST00000506055 MEIOCA2RUB1 952 aa7.15□□□□□ -1.26
PPARGC1A-204ENST00000506055 CCDC182A6NF36 153 aa7.15□□□□□ -1.26
PPARGC1A-204ENST00000506055 A6NL46 340 aa7.15□□□□□ -1.26
PPARGC1A-204ENST00000506055 CASC3O15234 703 aaKnown RBP7.15□□□□□ -1.26
PPARGC1A-204ENST00000506055 IDH3BO43837 385 aa7.15□□□□□ -1.26
PPARGC1A-204ENST00000506055 ALPPP05187 535 aa7.15□□□□□ -1.26
PPARGC1A-204ENST00000506055 CSF3P09919 207 aa7.15□□□□□ -1.26
PPARGC1A-204ENST00000506055 MYOGP15173 224 aa7.15□□□□□ -1.26
PPARGC1A-204ENST00000506055 GNSP15586 552 aa7.15□□□□□ -1.26
PPARGC1A-204ENST00000506055 CSNK2A2P19784 350 aaPredicted RBP7.15□□□□□ -1.26
PPARGC1A-204ENST00000506055 SOX18P35713 384 aa7.15□□□□□ -1.26
PPARGC1A-204ENST00000506055 IFNGR2P38484 337 aa7.15□□□□□ -1.26
PPARGC1A-204ENST00000506055 GPR4P46093 362 aa7.15□□□□□ -1.26
PPARGC1A-204ENST00000506055 SOX9P48436 509 aa7.15□□□□□ -1.26
PPARGC1A-204ENST00000506055 SLC9A3P48764 834 aa7.15□□□□□ -1.26
PPARGC1A-204ENST00000506055 GAS1P54826 345 aa7.15□□□□□ -1.26
PPARGC1A-204ENST00000506055 PRR5P85299 388 aa7.15□□□□□ -1.26
PPARGC1A-204ENST00000506055 UBE3AQ05086 875 aa7.15□□□□□ -1.26
PPARGC1A-204ENST00000506055 INSL4Q14641 139 aa7.15□□□□□ -1.26
PPARGC1A-204ENST00000506055 LTB4RQ15722 352 aa7.15□□□□□ -1.26
PPARGC1A-204ENST00000506055 GLYR1Q49A26 553 aaPredicted RBP7.15□□□□□ -1.26
PPARGC1A-204ENST00000506055 C6orf132Q5T0Z8 1188 aa7.15□□□□□ -1.26
PPARGC1A-204ENST00000506055 C6orf183Q5T699 404 aa7.15□□□□□ -1.26
PPARGC1A-204ENST00000506055 AGBL4Q5VU57 503 aa7.15□□□□□ -1.26
PPARGC1A-204ENST00000506055 KIAA1211LQ6NV74 962 aa7.15□□□□□ -1.26
PPARGC1A-204ENST00000506055 XKRXQ6PP77 449 aa7.15□□□□□ -1.26
PPARGC1A-204ENST00000506055 NKAIN4Q8IVV8 208 aa7.15□□□□□ -1.26
PPARGC1A-204ENST00000506055 HDDC3Q8N4P3 179 aa7.15□□□□□ -1.26
PPARGC1A-204ENST00000506055 TTLQ8NG68 377 aa7.15□□□□□ -1.26
PPARGC1A-204ENST00000506055 OR4F15Q8NGB8 312 aa7.15□□□□□ -1.26
PPARGC1A-204ENST00000506055 GNPDA2Q8TDQ7 276 aa7.15□□□□□ -1.26
PPARGC1A-204ENST00000506055 GANCQ8TET4 914 aa7.15□□□□□ -1.26
PPARGC1A-204ENST00000506055 CHAC2Q8WUX2 184 aa7.15□□□□□ -1.26
PPARGC1A-204ENST00000506055 UFD1Q92890 307 aa7.15□□□□□ -1.26
PPARGC1A-204ENST00000506055 FGF13Q92913 245 aa7.15□□□□□ -1.26
PPARGC1A-204ENST00000506055 FGF11Q92914 225 aa7.15□□□□□ -1.26
PPARGC1A-204ENST00000506055 SMARCD2Q92925 531 aa7.15□□□□□ -1.26
PPARGC1A-204ENST00000506055 ARMC5Q96C12 935 aa7.15□□□□□ -1.26
PPARGC1A-204ENST00000506055 ZNF764Q96H86 408 aaPredicted RBP7.15□□□□□ -1.26
PPARGC1A-204ENST00000506055 WDFY2Q96P53 400 aa7.15□□□□□ -1.26
PPARGC1A-204ENST00000506055 FCRL4Q96PJ5 515 aa7.15□□□□□ -1.26
PPARGC1A-204ENST00000506055 SLC38A1Q9H2H9 487 aa7.15□□□□□ -1.26
PPARGC1A-204ENST00000506055 SYNPO2LQ9H987 977 aa7.15□□□□□ -1.26
PPARGC1A-204ENST00000506055 SLC6A20Q9NP91 592 aa7.15□□□□□ -1.26
PPARGC1A-204ENST00000506055 MALT1Q9UDY8 824 aa7.15□□□□□ -1.26
PPARGC1A-204ENST00000506055 CLCA2Q9UQC9 943 aa7.15□□□□□ -1.26
PPARGC1A-204ENST00000506055 DNMT3AQ9Y6K1 912 aaPredicted RBP7.15□□□□□ -1.26
PPARGC1A-204ENST00000506055 HEATR5BQ9P2D3 2071 aa7.14□□□□□ -1.27
PPARGC1A-204ENST00000506055 SLC35F4A4IF30 521 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms